BolC1t00315H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	BolC1t00315H-R
Unique Name	BolC1t00315H-R-P
Type	polypeptide
Organism	Brassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length	356

Homology

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BLAST of BolC1t00315H-R vs. GenBank_protein
Match: XP_013646315.1 (thiol-disulfide oxidoreductase LTO1-like [Brassica napus] >XP_013646382.1 thiol-disulfide oxidoreductase LTO1-like [Brassica napus] >XP_013646448.1 thiol-disulfide oxidoreductase LTO1-like [Brassica napus] >VDD47926.1 unnamed protein product [Brassica oleracea])

HSP 1 Score: 692 bits (1787), Expect = 3.870e-251
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0

Query:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQAKPLQ 355
            MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQAKPLQ
Sbjct:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQAKPLQ 355

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BLAST of BolC1t00315H-R vs. GenBank_protein
Match: KAF3530628.1 (hypothetical protein DY000_02036480 [Brassica cretica])

HSP 1 Score: 674 bits (1739), Expect = 8.310e-244
Identity = 345/355 (97.18%), Postives = 349/355 (98.31%), Query Frame = 0

Query:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQAKPLQ 355
            MMARFIPVSSCQFRF  RELPPSS ALNPRRFEVSRRRFPIKCSSSE +DGVD VSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYA+VFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVS FLSFTLFFLA+KDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKI+KACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQAKPLQ
Sbjct:    2 MMARFIPVSSCQFRFSCRELPPSSSALNPRRFEVSRRRFPIKCSSSESDDGVDLVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYALVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSAFLSFTLFFLAVKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIFKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQAKPLQ 356

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BLAST of BolC1t00315H-R vs. GenBank_protein
Match: XP_013597597.1 (PREDICTED: thiol-disulfide oxidoreductase LTO1-like [Brassica oleracea var. oleracea] >XP_013597605.1 PREDICTED: thiol-disulfide oxidoreductase LTO1-like [Brassica oleracea var. oleracea] >XP_013597614.1 PREDICTED: thiol-disulfide oxidoreductase LTO1-like [Brassica oleracea var. oleracea] >CAF2067652.1 unnamed protein product [Brassica napus])

HSP 1 Score: 665 bits (1715), Expect = 4.230e-240
Identity = 341/358 (95.25%), Postives = 349/358 (97.49%), Query Frame = 0

Query:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQA---KPLQ 355
            MMARFIPVSSCQFRFG RELPPSS ALNPRRFEVSRRRFPIKCSSSE +DGVDSVSINSS YSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYA+VFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYIL+TKLSGSSCLYCLVS FLSFTLFFLA+KDVK+QEIQQVVGLQICLALIVVASLTASYSTA+PIPSSSGDIELPYYSTEITT SSPYAIALAKHLNS+GAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKI+KACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQA   KPLQ
Sbjct:    2 MMARFIPVSSCQFRFGFRELPPSSSALNPRRFEVSRRRFPIKCSSSESDDGVDSVSINSSMYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYALVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILNTKLSGSSCLYCLVSAFLSFTLFFLAVKDVKLQEIQQVVGLQICLALIVVASLTASYSTARPIPSSSGDIELPYYSTEITTLSSPYAIALAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIFKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQATEAKPLQ 359

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BLAST of BolC1t00315H-R vs. GenBank_protein
Match: XP_009150586.1 (thiol-disulfide oxidoreductase LTO1 [Brassica rapa])

HSP 1 Score: 663 bits (1710), Expect = 2.350e-239
Identity = 338/351 (96.30%), Postives = 344/351 (98.01%), Query Frame = 0

Query:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQA 351
            MMARFIPVSSCQFRFG RELPPSS +LNPRRFEVSRRRF IKCSSSE +DGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYA+VFGVPLPVIGFVMYGLVTALS QL EGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVS FLSF+LFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNS+GAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKI+KACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQA
Sbjct:    1 MMARFIPVSSCQFRFGFRELPPSSSSLNPRRFEVSRRRFSIKCSSSESDDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYALVFGVPLPVIGFVMYGLVTALSTQLGEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSAFLSFSLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIFKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQA 351

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BLAST of BolC1t00315H-R vs. GenBank_protein
Match: CAF2146794.1 (unnamed protein product [Brassica napus] >VDC73776.1 unnamed protein product [Brassica rapa])

HSP 1 Score: 660 bits (1704), Expect = 2.010e-238
Identity = 336/351 (95.73%), Postives = 344/351 (98.01%), Query Frame = 0

Query:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQA 351
            MMARFIPVSSCQFRFG RELPPSS +LNPRRFEVSRRRF IKCSSSE +DGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYA+VFGVPLPVIGFVMYGLVTALSAQL EGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVS FLSFTLFFLA+KDVK+QE+QQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNS+GAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKI+KACSDVGIEGFPTWMINGQVLSGEVELAELAEMSG SLDQA
Sbjct:    2 MMARFIPVSSCQFRFGFRELPPSSSSLNPRRFEVSRRRFSIKCSSSESDDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYALVFGVPLPVIGFVMYGLVTALSAQLGEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSAFLSFTLFFLAVKDVKLQELQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIFKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGLSLDQA 352

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BLAST of BolC1t00315H-R vs. GenBank_protein
Match: XP_013641579.1 (thiol-disulfide oxidoreductase LTO1-like [Brassica napus] >XP_013641660.1 thiol-disulfide oxidoreductase LTO1-like [Brassica napus])

HSP 1 Score: 651 bits (1679), Expect = 1.290e-234
Identity = 335/352 (95.17%), Postives = 340/352 (96.59%), Query Frame = 0

Query:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPI-PSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQA 351
            MMARFIPVSSCQFRF  RELPPSS  L PRRFEVSRRRF IKCSSSE +DGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYA+VFGVPLPVIGFVMYGLVT LS QL EGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVS FLSF+LFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPI PSSSGDIELPYYSTEITTSSSPYAIALAKHLNS+GAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSL+QA
Sbjct:    1 MMARFIPVSSCQFRFSFRELPPSSSTLYPRRFEVSRRRFSIKCSSSESDDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYALVFGVPLPVIGFVMYGLVTTLSTQLGEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSAFLSFSLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLEQA 352

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BLAST of BolC1t00315H-R vs. GenBank_protein
Match: RID77347.1 (hypothetical protein BRARA_A00269 [Brassica rapa])

HSP 1 Score: 649 bits (1673), Expect = 1.020e-233
Identity = 330/351 (94.02%), Postives = 340/351 (96.87%), Query Frame = 0

Query:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQA 351
            MMARFIPVSSCQFRF  RELPPSS  L PRRFEVSRRRF IKCSSSE +DGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYA+VFGVPLP+IGFVMYGLVTALS QL EGNLPFGVSK+NGRFALFAATTTMASASAYFLYIL+TKLSGSSC+YCLVS FLSF+LFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYA ALAKHLNS+GAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKI+KACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSL+QA
Sbjct:    1 MMARFIPVSSCQFRFSFRELPPSSSTLYPRRFEVSRRRFSIKCSSSESDDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYALVFGVPLPMIGFVMYGLVTALSTQLEEGNLPFGVSKSNGRFALFAATTTMASASAYFLYILNTKLSGSSCMYCLVSAFLSFSLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYATALAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIFKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLEQA 351

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BLAST of BolC1t00315H-R vs. GenBank_protein
Match: XP_018471957.1 (PREDICTED: thiol-disulfide oxidoreductase LTO1-like [Raphanus sativus] >XP_018471958.1 PREDICTED: thiol-disulfide oxidoreductase LTO1-like [Raphanus sativus])

HSP 1 Score: 629 bits (1623), Expect = 6.400e-226
Identity = 327/368 (88.86%), Postives = 336/368 (91.30%), Query Frame = 0

Query:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDS----------------VSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQAK 352
            MMARFIPVSSCQF FG RELPPSS +L PRRFEVS RRFPIKCSSSEPE GVDS                VSINSSTY+WFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGF MYGLVTALSAQL E NLPFG+SKTNGRFALFA TTTMAS+SAYFLYILSTKLSGSSCLYCLVS FLSFTLFFL  KDVK+Q+IQQVVGLQICLALIVVASLTASYSTAQPI SSS DIELPYYSTEITTSSSPYAIALAKHLNS+GAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFP+GYKKGTKI+KACSDVGIEGFPTWMINGQVL GEVELAELAEMSGFSLDQAK
Sbjct:    2 MMARFIPVSSCQFCFGFRELPPSSSSLYPRRFEVSNRRFPIKCSSSEPEYGVDSSPSLSSXXXXXXXXXEVSINSSTYNWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFAMYGLVTALSAQLGEDNLPFGISKTNGRFALFAITTTMASSSAYFLYILSTKLSGSSCLYCLVSAFLSFTLFFLTSKDVKLQKIQQVVGLQICLALIVVASLTASYSTAQPILSSSRDIELPYYSTEITTSSSPYAIALAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPQGYKKGTKIFKACSDVGIEGFPTWMINGQVLGGEVELAELAEMSGFSLDQAK 369

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BLAST of BolC1t00315H-R vs. GenBank_protein
Match: XP_006412064.1 (thiol-disulfide oxidoreductase LTO1 [Eutrema salsugineum] >ESQ53517.1 hypothetical protein EUTSA_v10025477mg [Eutrema salsugineum])

HSP 1 Score: 600 bits (1547), Expect = 3.120e-214
Identity = 309/368 (83.97%), Postives = 327/368 (88.86%), Query Frame = 0

Query:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFP---IKCSSSEPEDGVDS---------------VSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQ 350
            MMARF+ VSS QF F +R+ PP S  L PRR EVS RRFP   IKCSSSEPEDG DS               VS NS TY+W+TG+GG+GMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFG+PLPVIGF MYGLVTALS QL EGNLPFG+SKTNGRFALFA TT MASASAYFLYILSTKLSGSSCLYCLVS FLSF+LFFL+LKDVK+QEIQQVVGLQICLA+IVVASLTASYSTAQPIPS SGDIELPY+STEITTSSSPYAI LAKHLNS+GAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKI++ACSD GIEGFPTW+INGQVLSGEVELAELAEMSGFSLDQ
Sbjct:    1 MMARFVSVSSPQFHFSVRDFPPPSSNLQPRRLEVSDRRFPVVPIKCSSSEPEDGGDSAPSLLSXXXXXXATEVSTNSWTYNWYTGIGGVGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGIPLPVIGFCMYGLVTALSTQLGEGNLPFGISKTNGRFALFATTTAMASASAYFLYILSTKLSGSSCLYCLVSAFLSFSLFFLSLKDVKLQEIQQVVGLQICLAIIVVASLTASYSTAQPIPSRSGDIELPYFSTEITTSSSPYAIGLAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIFRACSDAGIEGFPTWIINGQVLSGEVELAELAEMSGFSLDQ 368

[Close]

BLAST of BolC1t00315H-R vs. GenBank_protein
Match: XP_018450398.1 (PREDICTED: thiol-disulfide oxidoreductase LTO1-like isoform X1 [Raphanus sativus])

HSP 1 Score: 595 bits (1533), Expect = 7.320e-212
Identity = 307/368 (83.42%), Postives = 330/368 (89.67%), Query Frame = 0

Query:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDS---------------VSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQL--AEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQA 351
            MMARF+ VSS  FRF  RELPPSS +L PRRFEV  RRF IKCSSS+PEDGVDS               V +++S+Y+W+T LGG GMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYA+VFGVPLPV+GFVMYGLVTALSAQL  AEGNLPFGVSKTNGR ALF ATTTMASASAYFLYILSTKLSGSSCLYCL+S FLSF+LFFL+LKDVK+QEIQQVVGLQICL +IVVASL+ASYS+AQPIPS SGDIELPYYSTEITTSSSPYA+ALAKHLNS+GAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKG +I+KACSD  IEGFPTWMINGQVLSGEVELAELAEMSGF+LDQA
Sbjct:   17 MMARFVSVSSPHFRFSFRELPPSSSSLCPRRFEVYHRRFSIKCSSSKPEDGVDSAPSLSSPSSSPSTSEVPVDTSSYNWYTVLGGFGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYALVFGVPLPVVGFVMYGLVTALSAQLGNAEGNLPFGVSKTNGRLALFTATTTMASASAYFLYILSTKLSGSSCLYCLLSAFLSFSLFFLSLKDVKLQEIQQVVGLQICLVIIVVASLSASYSSAQPIPSRSGDIELPYYSTEITTSSSPYAVALAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGVQIFKACSDARIEGFPTWMINGQVLSGEVELAELAEMSGFTLDQA 384

The following BLAST results are available for this feature:

BLAST of BolC1t00315H-R vs. GenBank_protein

BLAST of BolC1t00315H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
XP_013646315.1	3.870e-251	100.00	thiol-disulfide oxidoreductase LTO1-like [Brassica...	[more]
KAF3530628.1	8.310e-244	97.18	hypothetical protein DY000_02036480 [Brassica cret...	[more]
XP_013597597.1	4.230e-240	95.25	PREDICTED: thiol-disulfide oxidoreductase LTO1-lik...	[more]
XP_009150586.1	2.350e-239	96.30	thiol-disulfide oxidoreductase LTO1 [Brassica rapa...	[more]
CAF2146794.1	2.010e-238	95.73	unnamed protein product [Brassica napus] >VDC73776...	[more]
XP_013641579.1	1.290e-234	95.17	thiol-disulfide oxidoreductase LTO1-like [Brassica...	[more]
RID77347.1	1.020e-233	94.02	hypothetical protein BRARA_A00269 [Brassica rapa]	[more]
XP_018471957.1	6.400e-226	88.86	PREDICTED: thiol-disulfide oxidoreductase LTO1-lik...	[more]
XP_006412064.1	3.120e-214	83.97	thiol-disulfide oxidoreductase LTO1 [Eutrema salsu...	[more]
XP_018450398.1	7.320e-212	83.42	PREDICTED: thiol-disulfide oxidoreductase LTO1-lik...	[more]

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GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0048038	quinone binding

InterPro

Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012932	Vitamin K epoxide reductase	SMART	SM00756	vkor_5	coord: 58..198 e-value: 3.5E-39 score: 146.2
IPR012932	Vitamin K epoxide reductase	PFAM	PF07884	VKOR	coord: 65..194 e-value: 5.0E-26 score: 91.4
IPR038354	VKOR domain superfamily	GENE3D	1.20.1440.130	VKOR domain	coord: 52..229 e-value: 9.7E-36 score: 124.6
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 252..353 e-value: 2.9E-28 score: 99.7
None	No IPR available	PANTHER	PTHR34573	FAMILY NOT NAMED	coord: 2..350
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 129..147
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 167..171
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..105
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 172..195
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 148..166
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 196..206
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 207..225
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 106..128
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 226..355
None	No IPR available	TMHMM	TMhelix		coord: 172..194
None	No IPR available	TMHMM	TMhelix		coord: 60..82
None	No IPR available	TMHMM	TMhelix		coord: 148..167
None	No IPR available	TMHMM	TMhelix		coord: 206..228
None	No IPR available	TMHMM	TMhelix		coord: 106..128
IPR044698	Vitamin K epoxide reductase-like VKOR/LOT1	CDD	cd12916	VKOR_1	coord: 62..195 e-value: 4.3927E-39 score: 133.533
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 269..342

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C1	contig	C1:1726209..1727974 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Interproscan on OGS1.0	2022-03-19
Blast2go on OGS1.0	2022-03-19
Diamond on OGS1.0 vs NR	2022-03-19
Brassica oleracea HDEM OGS1.0	2018-11-02

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
BolC1t00315H-R	BolC1t00315H-R	Brassica oleracea HDEM	mRNA	C1 1726209..1727974 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>BolC1t00315H-R-P ID=BolC1t00315H-R-P|Name=BolC1t00315H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=356bp
MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPED
GVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGD
VLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFAL
FAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKM
QEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTS
SSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFP
EGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQ
AKPLQ.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR044698	VKOR/LTO1
IPR038354	VKOR_sf
IPR012932	VKOR

Vocabulary: **Molecular Function**
Term	Definition
GO:0048038	quinone binding
GO:0016491	oxidoreductase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Orthology

View orthology data for BolC1t00315H-R-P