BolC1t00315H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameBolC1t00315H-R
Unique NameBolC1t00315H-R-P
Typepolypeptide
OrganismBrassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length356
Homology
BLAST of BolC1t00315H-R vs. GenBank_protein
Match: XP_013646315.1 (thiol-disulfide oxidoreductase LTO1-like [Brassica napus] >XP_013646382.1 thiol-disulfide oxidoreductase LTO1-like [Brassica napus] >XP_013646448.1 thiol-disulfide oxidoreductase LTO1-like [Brassica napus] >VDD47926.1 unnamed protein product [Brassica oleracea])

HSP 1 Score: 692 bits (1787), Expect = 3.870e-251
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0
Query:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQAKPLQ 355
            MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQAKPLQ
Sbjct:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQAKPLQ 355          
BLAST of BolC1t00315H-R vs. GenBank_protein
Match: KAF3530628.1 (hypothetical protein DY000_02036480 [Brassica cretica])

HSP 1 Score: 674 bits (1739), Expect = 8.310e-244
Identity = 345/355 (97.18%), Postives = 349/355 (98.31%), Query Frame = 0
Query:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQAKPLQ 355
            MMARFIPVSSCQFRF  RELPPSS ALNPRRFEVSRRRFPIKCSSSE +DGVD VSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYA+VFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVS FLSFTLFFLA+KDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKI+KACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQAKPLQ
Sbjct:    2 MMARFIPVSSCQFRFSCRELPPSSSALNPRRFEVSRRRFPIKCSSSESDDGVDLVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYALVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSAFLSFTLFFLAVKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIFKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQAKPLQ 356          
BLAST of BolC1t00315H-R vs. GenBank_protein
Match: XP_013597597.1 (PREDICTED: thiol-disulfide oxidoreductase LTO1-like [Brassica oleracea var. oleracea] >XP_013597605.1 PREDICTED: thiol-disulfide oxidoreductase LTO1-like [Brassica oleracea var. oleracea] >XP_013597614.1 PREDICTED: thiol-disulfide oxidoreductase LTO1-like [Brassica oleracea var. oleracea] >CAF2067652.1 unnamed protein product [Brassica napus])

HSP 1 Score: 665 bits (1715), Expect = 4.230e-240
Identity = 341/358 (95.25%), Postives = 349/358 (97.49%), Query Frame = 0
Query:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQA---KPLQ 355
            MMARFIPVSSCQFRFG RELPPSS ALNPRRFEVSRRRFPIKCSSSE +DGVDSVSINSS YSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYA+VFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYIL+TKLSGSSCLYCLVS FLSFTLFFLA+KDVK+QEIQQVVGLQICLALIVVASLTASYSTA+PIPSSSGDIELPYYSTEITT SSPYAIALAKHLNS+GAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKI+KACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQA   KPLQ
Sbjct:    2 MMARFIPVSSCQFRFGFRELPPSSSALNPRRFEVSRRRFPIKCSSSESDDGVDSVSINSSMYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYALVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILNTKLSGSSCLYCLVSAFLSFTLFFLAVKDVKLQEIQQVVGLQICLALIVVASLTASYSTARPIPSSSGDIELPYYSTEITTLSSPYAIALAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIFKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQATEAKPLQ 359          
BLAST of BolC1t00315H-R vs. GenBank_protein
Match: XP_009150586.1 (thiol-disulfide oxidoreductase LTO1 [Brassica rapa])

HSP 1 Score: 663 bits (1710), Expect = 2.350e-239
Identity = 338/351 (96.30%), Postives = 344/351 (98.01%), Query Frame = 0
Query:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQA 351
            MMARFIPVSSCQFRFG RELPPSS +LNPRRFEVSRRRF IKCSSSE +DGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYA+VFGVPLPVIGFVMYGLVTALS QL EGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVS FLSF+LFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNS+GAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKI+KACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQA
Sbjct:    1 MMARFIPVSSCQFRFGFRELPPSSSSLNPRRFEVSRRRFSIKCSSSESDDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYALVFGVPLPVIGFVMYGLVTALSTQLGEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSAFLSFSLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIFKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQA 351          
BLAST of BolC1t00315H-R vs. GenBank_protein
Match: CAF2146794.1 (unnamed protein product [Brassica napus] >VDC73776.1 unnamed protein product [Brassica rapa])

HSP 1 Score: 660 bits (1704), Expect = 2.010e-238
Identity = 336/351 (95.73%), Postives = 344/351 (98.01%), Query Frame = 0
Query:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQA 351
            MMARFIPVSSCQFRFG RELPPSS +LNPRRFEVSRRRF IKCSSSE +DGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYA+VFGVPLPVIGFVMYGLVTALSAQL EGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVS FLSFTLFFLA+KDVK+QE+QQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNS+GAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKI+KACSDVGIEGFPTWMINGQVLSGEVELAELAEMSG SLDQA
Sbjct:    2 MMARFIPVSSCQFRFGFRELPPSSSSLNPRRFEVSRRRFSIKCSSSESDDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYALVFGVPLPVIGFVMYGLVTALSAQLGEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSAFLSFTLFFLAVKDVKLQELQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIFKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGLSLDQA 352          
BLAST of BolC1t00315H-R vs. GenBank_protein
Match: XP_013641579.1 (thiol-disulfide oxidoreductase LTO1-like [Brassica napus] >XP_013641660.1 thiol-disulfide oxidoreductase LTO1-like [Brassica napus])

HSP 1 Score: 651 bits (1679), Expect = 1.290e-234
Identity = 335/352 (95.17%), Postives = 340/352 (96.59%), Query Frame = 0
Query:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPI-PSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQA 351
            MMARFIPVSSCQFRF  RELPPSS  L PRRFEVSRRRF IKCSSSE +DGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYA+VFGVPLPVIGFVMYGLVT LS QL EGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVS FLSF+LFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPI PSSSGDIELPYYSTEITTSSSPYAIALAKHLNS+GAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSL+QA
Sbjct:    1 MMARFIPVSSCQFRFSFRELPPSSSTLYPRRFEVSRRRFSIKCSSSESDDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYALVFGVPLPVIGFVMYGLVTTLSTQLGEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSAFLSFSLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLEQA 352          
BLAST of BolC1t00315H-R vs. GenBank_protein
Match: RID77347.1 (hypothetical protein BRARA_A00269 [Brassica rapa])

HSP 1 Score: 649 bits (1673), Expect = 1.020e-233
Identity = 330/351 (94.02%), Postives = 340/351 (96.87%), Query Frame = 0
Query:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQA 351
            MMARFIPVSSCQFRF  RELPPSS  L PRRFEVSRRRF IKCSSSE +DGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYA+VFGVPLP+IGFVMYGLVTALS QL EGNLPFGVSK+NGRFALFAATTTMASASAYFLYIL+TKLSGSSC+YCLVS FLSF+LFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYA ALAKHLNS+GAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKI+KACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSL+QA
Sbjct:    1 MMARFIPVSSCQFRFSFRELPPSSSTLYPRRFEVSRRRFSIKCSSSESDDGVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYALVFGVPLPMIGFVMYGLVTALSTQLEEGNLPFGVSKSNGRFALFAATTTMASASAYFLYILNTKLSGSSCMYCLVSAFLSFSLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYATALAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIFKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLEQA 351          
BLAST of BolC1t00315H-R vs. GenBank_protein
Match: XP_018471957.1 (PREDICTED: thiol-disulfide oxidoreductase LTO1-like [Raphanus sativus] >XP_018471958.1 PREDICTED: thiol-disulfide oxidoreductase LTO1-like [Raphanus sativus])

HSP 1 Score: 629 bits (1623), Expect = 6.400e-226
Identity = 327/368 (88.86%), Postives = 336/368 (91.30%), Query Frame = 0
Query:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDS----------------VSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQAK 352
            MMARFIPVSSCQF FG RELPPSS +L PRRFEVS RRFPIKCSSSEPE GVDS                VSINSSTY+WFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGF MYGLVTALSAQL E NLPFG+SKTNGRFALFA TTTMAS+SAYFLYILSTKLSGSSCLYCLVS FLSFTLFFL  KDVK+Q+IQQVVGLQICLALIVVASLTASYSTAQPI SSS DIELPYYSTEITTSSSPYAIALAKHLNS+GAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFP+GYKKGTKI+KACSDVGIEGFPTWMINGQVL GEVELAELAEMSGFSLDQAK
Sbjct:    2 MMARFIPVSSCQFCFGFRELPPSSSSLYPRRFEVSNRRFPIKCSSSEPEYGVDSSPSLSSXXXXXXXXXEVSINSSTYNWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFAMYGLVTALSAQLGEDNLPFGISKTNGRFALFAITTTMASSSAYFLYILSTKLSGSSCLYCLVSAFLSFTLFFLTSKDVKLQKIQQVVGLQICLALIVVASLTASYSTAQPILSSSRDIELPYYSTEITTSSSPYAIALAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPQGYKKGTKIFKACSDVGIEGFPTWMINGQVLGGEVELAELAEMSGFSLDQAK 369          
BLAST of BolC1t00315H-R vs. GenBank_protein
Match: XP_006412064.1 (thiol-disulfide oxidoreductase LTO1 [Eutrema salsugineum] >ESQ53517.1 hypothetical protein EUTSA_v10025477mg [Eutrema salsugineum])

HSP 1 Score: 600 bits (1547), Expect = 3.120e-214
Identity = 309/368 (83.97%), Postives = 327/368 (88.86%), Query Frame = 0
Query:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFP---IKCSSSEPEDGVDS---------------VSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQ 350
            MMARF+ VSS QF F +R+ PP S  L PRR EVS RRFP   IKCSSSEPEDG DS               VS NS TY+W+TG+GG+GMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFG+PLPVIGF MYGLVTALS QL EGNLPFG+SKTNGRFALFA TT MASASAYFLYILSTKLSGSSCLYCLVS FLSF+LFFL+LKDVK+QEIQQVVGLQICLA+IVVASLTASYSTAQPIPS SGDIELPY+STEITTSSSPYAI LAKHLNS+GAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKI++ACSD GIEGFPTW+INGQVLSGEVELAELAEMSGFSLDQ
Sbjct:    1 MMARFVSVSSPQFHFSVRDFPPPSSNLQPRRLEVSDRRFPVVPIKCSSSEPEDGGDSAPSLLSXXXXXXATEVSTNSWTYNWYTGIGGVGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGIPLPVIGFCMYGLVTALSTQLGEGNLPFGISKTNGRFALFATTTAMASASAYFLYILSTKLSGSSCLYCLVSAFLSFSLFFLSLKDVKLQEIQQVVGLQICLAIIVVASLTASYSTAQPIPSRSGDIELPYFSTEITTSSSPYAIGLAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIFRACSDAGIEGFPTWIINGQVLSGEVELAELAEMSGFSLDQ 368          
BLAST of BolC1t00315H-R vs. GenBank_protein
Match: XP_018450398.1 (PREDICTED: thiol-disulfide oxidoreductase LTO1-like isoform X1 [Raphanus sativus])

HSP 1 Score: 595 bits (1533), Expect = 7.320e-212
Identity = 307/368 (83.42%), Postives = 330/368 (89.67%), Query Frame = 0
Query:    1 MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPEDGVDS---------------VSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYAVVFGVPLPVIGFVMYGLVTALSAQL--AEGNLPFGVSKTNGRFALFAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKMQEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTSSSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQA 351
            MMARF+ VSS  FRF  RELPPSS +L PRRFEV  RRF IKCSSS+PEDGVDS               V +++S+Y+W+T LGG GMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYA+VFGVPLPV+GFVMYGLVTALSAQL  AEGNLPFGVSKTNGR ALF ATTTMASASAYFLYILSTKLSGSSCLYCL+S FLSF+LFFL+LKDVK+QEIQQVVGLQICL +IVVASL+ASYS+AQPIPS SGDIELPYYSTEITTSSSPYA+ALAKHLNS+GAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKG +I+KACSD  IEGFPTWMINGQVLSGEVELAELAEMSGF+LDQA
Sbjct:   17 MMARFVSVSSPHFRFSFRELPPSSSSLCPRRFEVYHRRFSIKCSSSKPEDGVDSAPSLSSPSSSPSTSEVPVDTSSYNWYTVLGGFGMLDTAYLTYLKLTGSDAFCPVGGGTCGDVLNSDYALVFGVPLPVVGFVMYGLVTALSAQLGNAEGNLPFGVSKTNGRLALFTATTTMASASAYFLYILSTKLSGSSCLYCLLSAFLSFSLFFLSLKDVKLQEIQQVVGLQICLVIIVVASLSASYSSAQPIPSRSGDIELPYYSTEITTSSSPYAVALAKHLNSIGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFPEGYKKGVQIFKACSDARIEGFPTWMINGQVLSGEVELAELAEMSGFTLDQA 384          
The following BLAST results are available for this feature:
BLAST of BolC1t00315H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20
Match NameE-valueIdentityDescription
XP_013646315.13.870e-251100.00thiol-disulfide oxidoreductase LTO1-like [Brassica... [more]
KAF3530628.18.310e-24497.18hypothetical protein DY000_02036480 [Brassica cret... [more]
XP_013597597.14.230e-24095.25PREDICTED: thiol-disulfide oxidoreductase LTO1-lik... [more]
XP_009150586.12.350e-23996.30thiol-disulfide oxidoreductase LTO1 [Brassica rapa... [more]
CAF2146794.12.010e-23895.73unnamed protein product [Brassica napus] >VDC73776... [more]
XP_013641579.11.290e-23495.17thiol-disulfide oxidoreductase LTO1-like [Brassica... [more]
RID77347.11.020e-23394.02hypothetical protein BRARA_A00269 [Brassica rapa][more]
XP_018471957.16.400e-22688.86PREDICTED: thiol-disulfide oxidoreductase LTO1-lik... [more]
XP_006412064.13.120e-21483.97thiol-disulfide oxidoreductase LTO1 [Eutrema salsu... [more]
XP_018450398.17.320e-21283.42PREDICTED: thiol-disulfide oxidoreductase LTO1-lik... [more]

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GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0048038 quinone binding
InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012932Vitamin K epoxide reductaseSMARTSM00756vkor_5coord: 58..198
e-value: 3.5E-39
score: 146.2
IPR012932Vitamin K epoxide reductasePFAMPF07884VKORcoord: 65..194
e-value: 5.0E-26
score: 91.4
IPR038354VKOR domain superfamilyGENE3D1.20.1440.130VKOR domaincoord: 52..229
e-value: 9.7E-36
score: 124.6
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 252..353
e-value: 2.9E-28
score: 99.7
NoneNo IPR availablePANTHERPTHR34573FAMILY NOT NAMEDcoord: 2..350
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 129..147
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 167..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..195
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..166
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 196..206
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 207..225
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..128
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 226..355
NoneNo IPR availableTMHMMTMhelixcoord: 172..194
NoneNo IPR availableTMHMMTMhelixcoord: 60..82
NoneNo IPR availableTMHMMTMhelixcoord: 148..167
NoneNo IPR availableTMHMMTMhelixcoord: 206..228
NoneNo IPR availableTMHMMTMhelixcoord: 106..128
IPR044698Vitamin K epoxide reductase-like VKOR/LOT1CDDcd12916VKOR_1coord: 62..195
e-value: 4.3927E-39
score: 133.533
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 269..342

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C1contigC1:1726209..1727974 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Interproscan on OGS1.02022-03-19
Blast2go on OGS1.02022-03-19
Diamond on OGS1.0 vs NR2022-03-19
Brassica oleracea HDEM OGS1.02018-11-02
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
BolC1t00315H-RBolC1t00315H-RBrassica oleracea HDEMmRNAC1 1726209..1727974 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>BolC1t00315H-R-P ID=BolC1t00315H-R-P|Name=BolC1t00315H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=356bp
MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPED
GVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGD
VLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFAL
FAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKM
QEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTS
SSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFP
EGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQ
AKPLQ.
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR044698VKOR/LTO1
IPR038354VKOR_sf
IPR012932VKOR
Vocabulary: Molecular Function
TermDefinition
GO:0048038quinone binding
GO:0016491oxidoreductase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane