Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 1 |
Start | 1 |
Cds size | 1068 |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Species | Type | Position |
BolC1t00315H | BolC1t00315H | Brassica oleracea HDEM | gene | C1 1726209..1727974 + |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
BolC1t00315H | BolC1t00315H | Brassica oleracea HDEM | CDS | C1 1726209..1726307 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >BolC1t00315H-R ID=BolC1t00315H-R|Name=BolC1t00315H-R|organism=Brassica oleracea HDEM|type=mRNA|length=1068bp|location=Sequence derived from alignment at C1:1726209..1727974+ (Brassica oleracea HDEM)|Notes=Excludes all bases but those of type(s): exon.
ATGATGGCGAGGTTTATCCCTGTATCGTCTTGTCAGTTTCGTTTCGGCTT ACGCGAGCTTCCTCCTTCGTCGTTGGCTCTCAATCCAAGACGGTTCGAGG TCTCTCGCCGGAGATTCCCGATCAAATGCTCGTCGTCTGAGCCGGAAGAT GGTGTGGATTCGGTATCTATTAACAGTTCGACGTACAGCTGGTTCACCGG ACTCGGCGGTATCGGGATGTTAGACACCGCGTATTTAACCTACCTGAAAC TGACCGGATCCGATGCCTTTTGCCCCGTTGGTGGTGGTACTTGCGGCGAT GTCTTGAACAGCGATTACGCCGTTGTTTTTGGTGTTCCTCTGCCAGTGAT TGGGTTTGTTATGTATGGCTTAGTAACAGCTTTGAGTGCACAGCTTGCGG AAGGGAATCTACCCTTTGGAGTTAGTAAGACCAATGGGCGTTTTGCGTTA TTTGCGGCCACAACTACGATGGCATCTGCTAGTGCGTACTTCCTGTATAT ACTTAGCACAAAACTCTCAGGATCATCGTGCCTGTATTGTCTAGTGTCTG TTTTCCTATCGTTTACTCTATTTTTCCTCGCTTTAAAGGATGTGAAGATG CAAGAGATACAGCAAGTTGTAGGATTGCAGATATGCTTGGCACTCATAGT AGTTGCCTCCTTGACTGCTTCATATAGTACTGCTCAACCAATCCCTTCAA GCTCAGGTGACATTGAACTGCCATATTATTCAACAGAGATCACTACATCA TCGAGTCCCTATGCTATTGCTCTAGCAAAACATCTAAACTCCGTTGGAGC TAAAATGTATGGAGCATTCTGGTGTTCTCACTGCTTAGAGCAAAAAGAGA TGTTTGGAAGAGAAGCTGCAAAGCTACTGAATTACGTGGAATGTTTTCCC GAAGGGTACAAGAAAGGAACTAAGATATACAAGGCATGTTCAGATGTTGG GATCGAAGGTTTCCCGACATGGATGATAAATGGTCAAGTATTAAGCGGAG AAGTAGAACTCGCTGAACTAGCGGAGATGTCTGGATTCAGCCTTGATCAG GCCAAACCACTTCAGTAA back to topprotein sequence of BolC1t00315H-R >BolC1t00315H-R-P ID=BolC1t00315H-R-P|Name=BolC1t00315H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=356bp
MMARFIPVSSCQFRFGLRELPPSSLALNPRRFEVSRRRFPIKCSSSEPED GVDSVSINSSTYSWFTGLGGIGMLDTAYLTYLKLTGSDAFCPVGGGTCGD VLNSDYAVVFGVPLPVIGFVMYGLVTALSAQLAEGNLPFGVSKTNGRFAL FAATTTMASASAYFLYILSTKLSGSSCLYCLVSVFLSFTLFFLALKDVKM QEIQQVVGLQICLALIVVASLTASYSTAQPIPSSSGDIELPYYSTEITTS SSPYAIALAKHLNSVGAKMYGAFWCSHCLEQKEMFGREAAKLLNYVECFP EGYKKGTKIYKACSDVGIEGFPTWMINGQVLSGEVELAELAEMSGFSLDQ AKPLQ. back to topmRNA from alignment at C1:1726209..1727974+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BolC1t00315H-R ID=BolC1t00315H-R|Name=BolC1t00315H-R|organism=Brassica oleracea HDEM|type=mRNA|length=1766bp|location=Sequence derived from alignment at C1:1726209..1727974+ (Brassica oleracea HDEM) ATGATGGCGAGGTTTATCCCTGTATCGTCTTGTCAGTTTCGTTTCGGCTT
ACGCGAGCTTCCTCCTTCGTCGTTGGCTCTCAATCCAAGACGGTTCGAGG
TAAATCTCGTTTCATTTTCGTGTGTGATGGTAGTGTGATTGGTTAATTGA
AGTCAGATGTTCTTAATCAGGTCTCTCGCCGGAGATTCCCGATCAAATGC
TCGTCGTCTGAGCCGGAAGATGGTGTGGATTCGGTATCTATTAACAGTTC
GACGTACAGCTGGTTCACCGGACTCGGCGGTATCGGGATGTTAGACACCG
CGTATTTAACCTACCTGAAACTGACCGGATCCGATGCCTTTTGCCCCGTT
GGTGGTGGTACTTGCGGCGATGTCTTGAACAGCGATTACGCCGTTGTTTT
TGGTAACTATACATCGCTTTAGTGGTGATTAATGTATAGTCCTGAGTCTA
GACTAACCTGGAAACATGTTTGTAGCTTAGTGCAAGATTTGTGTGTGTAG
ATCTGTTGAAGTAGGTATTTTGATTAGATCCTGATTGAATAACTCAAATC
TTGAATCTGTGCTATGAGCTGTGTCAATGAATATCATGCTCCATGTTGAA
AGCTGAACTCAGTGACTGTTCTTTTGCATTTTCCCAGGTGTTCCTCTGCC
AGTGATTGGGTTTGTTATGTATGGCTTAGTAACAGCTTTGAGTGCACAGC
TTGCGGAAGGGAATCTACCCTTTGGAGTTAGTAAGACCAATGGGCGTTTT
GCGTTATTTGCGGCCACAACTACGATGGCATCTGCTAGTGCGTACTTCCT
GTATATACTTAGCACAAAACTCTCAGGATCATCGTGCCTGTATTGTCTAG
TGTCTGTTTTCCTATCGTTTACTCTATTTTTCCTCGCTTTAAAGGTATCC
CTTTATATCCATTTCTCTTACATTTTGGGTAAGTTGTCAAGATGAGTTCT
TAAGTTAGGTGCATGTGGTAGGATGTGAAGATGCAAGAGATACAGCAAGT
TGTAGGATTGCAGATATGCTTGGCACTCATAGTAGTTGCCTCCTTGACTG
CTTCATATAGTACTGCTCAACCAATCCCTTCAAGGTAATCTTGGTTCTTT
GGAGTCCGATGGCATGTTTTAATCCTTTCTGACAAGTAATGAAAAATAGC
TGTCCGAGGATGAATGAGTCAAATGAAGTGGTTTATCTTAACCCCAATAT
ACGTCTTTTGTTTTCACTCCTTGCAGCTCAGGTGACATTGAACTGCCATA
TTATTCAACAGAGATCACTACATCATCGAGTCCCTATGCTATTGCTCTAG
CAAAACATCTAAACTCCGTTGGAGCTAAAATGTATGGAGCATTCTGGTGT
TCTCACTGCTTAGAGCAAAAAGAGGTAGGTACTACTAGGTATTTAATTCA
TTATTGGTTTACGAGTAATCAGTTTCACGGATTTATCTTGTAACTATGTA
AGTTTTCCTCTATCTATAGATGTTTGGAAGAGAAGCTGCAAAGCTACTGA
ATTACGTGGAATGTTTTCCCGAAGGGTACAAGAAAGGAACTAAGATATAC
AAGGCATGTTCAGATGTTGGGATCGAAGGTTTCCCGACATGGATGATAAA
TGGTCAAGTGAGTGTAAATCCTCTGAATCCTTGGCACAAATTTTCATCAT
ATGTCAGTTACTATTTCACCTCTTTTATTGTTTAGGTATTAAGCGGAGAA
GTAGAACTCGCTGAACTAGCGGAGATGTCTGGATTCAGCCTTGATCAGGC
CAAACCACTTCAGTAA back to topCoding sequence (CDS) from alignment at C1:1726209..1727974+ >BolC1t00315H-R ID=BolC1t00315H-R|Name=BolC1t00315H-R|organism=Brassica oleracea HDEM|type=CDS|length=1068bp|location=Sequence derived from alignment at C1:1726209..1727974+ (Brassica oleracea HDEM) ATGATGGCGAGGTTTATCCCTGTATCGTCTTGTCAGTTTCGTTTCGGCTT ACGCGAGCTTCCTCCTTCGTCGTTGGCTCTCAATCCAAGACGGTTCGAGG TCTCTCGCCGGAGATTCCCGATCAAATGCTCGTCGTCTGAGCCGGAAGAT GGTGTGGATTCGGTATCTATTAACAGTTCGACGTACAGCTGGTTCACCGG ACTCGGCGGTATCGGGATGTTAGACACCGCGTATTTAACCTACCTGAAAC TGACCGGATCCGATGCCTTTTGCCCCGTTGGTGGTGGTACTTGCGGCGAT GTCTTGAACAGCGATTACGCCGTTGTTTTTGGTGTTCCTCTGCCAGTGAT TGGGTTTGTTATGTATGGCTTAGTAACAGCTTTGAGTGCACAGCTTGCGG AAGGGAATCTACCCTTTGGAGTTAGTAAGACCAATGGGCGTTTTGCGTTA TTTGCGGCCACAACTACGATGGCATCTGCTAGTGCGTACTTCCTGTATAT ACTTAGCACAAAACTCTCAGGATCATCGTGCCTGTATTGTCTAGTGTCTG TTTTCCTATCGTTTACTCTATTTTTCCTCGCTTTAAAGGATGTGAAGATG CAAGAGATACAGCAAGTTGTAGGATTGCAGATATGCTTGGCACTCATAGT AGTTGCCTCCTTGACTGCTTCATATAGTACTGCTCAACCAATCCCTTCAA GCTCAGGTGACATTGAACTGCCATATTATTCAACAGAGATCACTACATCA TCGAGTCCCTATGCTATTGCTCTAGCAAAACATCTAAACTCCGTTGGAGC TAAAATGTATGGAGCATTCTGGTGTTCTCACTGCTTAGAGCAAAAAGAGA TGTTTGGAAGAGAAGCTGCAAAGCTACTGAATTACGTGGAATGTTTTCCC GAAGGGTACAAGAAAGGAACTAAGATATACAAGGCATGTTCAGATGTTGG GATCGAAGGTTTCCCGACATGGATGATAAATGGTCAAGTATTAAGCGGAG AAGTAGAACTCGCTGAACTAGCGGAGATGTCTGGATTCAGCCTTGATCAG GCCAAACCACTTCAGTAA back to top
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