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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 1 |
Start | 1 |
Cds size | 1470 |
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Species | Type | Position |
BolC1t00264H | BolC1t00264H | Brassica oleracea HDEM | gene | C1 1456689..1459059 - |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
BolC1t00264H | BolC1t00264H | Brassica oleracea HDEM | CDS | C1 1456689..1456804 - |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >BolC1t00264H-R ID=BolC1t00264H-R|Name=BolC1t00264H-R|organism=Brassica oleracea HDEM|type=mRNA|length=1470bp|location=Sequence derived from alignment at C1:1456689..1459059- (Brassica oleracea HDEM)|Notes=Excludes all bases but those of type(s): exon.
ATGGCGACGACGGCGATAGGCTTTCTGATGCTCTTGTCATACTTCTTGAG CTTGTCCCATGGATTAGTACAACCCCGTAGGATCTCTCATGGTTTGTCCG AAAGCGGAAAGTACTTGACGAGAGATGAGCTCTGGTTCAATCAAACCCTT GACCACTTCTCTCCATATGACCATCGCAGATTCAGACAGAGATACTATGA ATATCTAGATCATTTACGAGTTCCTGATGGACCTATATTTCTGATGATCT GCGGCGAAGGCCCTTGCTATGGAATACCAAATGATTATATAAGTGTGTTA GCGAAGAAGTTCGACGCAGGTGTTGTTTCACTCGAGCATCGTTACTATGG AAAAAGCTCACCTTTTAACTCATTAGCCACTGAGAATCTCAAGTATCTTT CATCTAAACAAGCCCTTTCCGATTTAGCTGCTTTTCGTGGATATTACCAG GCAAGTTTTCTTGAATATTTGAATGTTAAGCTGAATAGAACTGGGAAGGT TGATAATCCTTGGTTCTTCTTCGGAGCGTCTTACTCTGGAGCTTTGAGCG CTTGGTTCCGCCTAAAGTTCCCTCATTTGACTTGTGGAAGCCTCGCTAGC TCTGCAGTTGTTCGTGCTGTCTACGAGTTTCCTGAATTTGACAAACAGCA GATAGGTGAGTCAGCTGGACCGGAATGTAAAGCTGCACTACAAGAGACTA ATAAACTCGTGGAACTAGCGCTTAAAGTAAATAATAAGGCTCTGAAAGCT CTCTTCAATTCCACCGAGCTTGATGTTGATGGTGATTTCTTATACTTCGT AGCGGATGCACAAGTCATGGCGTTCCAATACGGAAACCCAGATAAGTTAT GTGTTCCTATGGTGGATGCCAAGAAGAGCGGTGGTGATTTAGTGGAAGCA TATGCTAAATACGTTAGAGAGTATTGCTTCGGAGTTTTTGGGTTAAGCGC TAAAACATATAGCAGGAAGCATCTGCTAGATACTGCGATCACCCCAGAGA GCGCAGATCGTCTGTGGTGGTTCCAAGTTTGCACTGAAGTGGCGTATTTC CAGGTGGCACCTGCAAACGATAGCATCCGGTCTCATCAAGTCAACACAGA GTATCATTTGGATCTATGCAAGACTCTGTTTGGTAAAGGTGTTTATCCTG AAGTCGATGCAACAAACCTGTACTATGGAGGTGATAGAATTGCTGCTACG AAAATTGTTTTCACGAATGGGTCACAAGATCCATGGCGTCATGCATCCAA ACAGACCTCATCTCCTGACCTGCCTTCTTACATCATCACTTGTCACAACT GTGGCCATGGAAGTGATCTTCGAGGATGCCCTCAGTCTCCATTGATCATC GAAGGTGATTCCAAGAACTGCAGTTCGCCAGATGCTGTGAATAAAGTGAG GCAACATATAATAGAACACATGGACTTGTGGCTCTCTGAGTGCCGTGGAG TGCTTCGAAGTTCCATCTAG back to topprotein sequence of BolC1t00264H-R >BolC1t00264H-R-P ID=BolC1t00264H-R-P|Name=BolC1t00264H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=490bp
MATTAIGFLMLLSYFLSLSHGLVQPRRISHGLSESGKYLTRDELWFNQTL DHFSPYDHRRFRQRYYEYLDHLRVPDGPIFLMICGEGPCYGIPNDYISVL AKKFDAGVVSLEHRYYGKSSPFNSLATENLKYLSSKQALSDLAAFRGYYQ ASFLEYLNVKLNRTGKVDNPWFFFGASYSGALSAWFRLKFPHLTCGSLAS SAVVRAVYEFPEFDKQQIGESAGPECKAALQETNKLVELALKVNNKALKA LFNSTELDVDGDFLYFVADAQVMAFQYGNPDKLCVPMVDAKKSGGDLVEA YAKYVREYCFGVFGLSAKTYSRKHLLDTAITPESADRLWWFQVCTEVAYF QVAPANDSIRSHQVNTEYHLDLCKTLFGKGVYPEVDATNLYYGGDRIAAT KIVFTNGSQDPWRHASKQTSSPDLPSYIITCHNCGHGSDLRGCPQSPLII EGDSKNCSSPDAVNKVRQHIIEHMDLWLSECRGVLRSSI. back to topmRNA from alignment at C1:1456689..1459059- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >BolC1t00264H-R ID=BolC1t00264H-R|Name=BolC1t00264H-R|organism=Brassica oleracea HDEM|type=mRNA|length=2371bp|location=Sequence derived from alignment at C1:1456689..1459059- (Brassica oleracea HDEM) ATGGCGACGACGGCGATAGGCTTTCTGATGCTCTTGTCATACTTCTTGAG
CTTGTCCCATGGATTAGTACAACCCCGTAGGATCTCTCATGGTTTGTCCG
AAAGCGGAAAGTACTTGACGAGAGATGAGCTCTGGTTCAATCAAACCCTT
GACCACTTCTCTCCATATGTAATCAATCTAATCCGTTTAGAGGGATACTT
TTTTTAGATTCTGTGTGTTCTATAAATAGTTATGTTTTTTTTTTTTACAT
TACAGGACCATCGCAGATTCAGACAGAGATACTATGAATATCTAGATCAT
TTACGAGTTCCTGATGGACCTATATTTCTGATGATCTGCGGCGAAGGCCC
TTGCTATGGAATACCAAATGATTATATAAGTGTAAGAGTTTTTTTTTCTC
TGTAAAGACTACTCCTTTGATTGATTTAACATCGATAGTTTCTGAAATTT
TCTTTAGGTGTTAGCGAAGAAGTTCGACGCAGGTGTTGTTTCACTCGAGC
ATCGTTACTATGGAAAAAGCTCACCTTTTAACTCATTAGCCACTGAGAAT
CTCAAGTATCTTTCATCTAAACAAGCCCTTTCCGATTTAGCTGCTTTTCG
TGGATATTACCAGGCAAGTTTTCTTGTTGTTTTTGTGCTATATAGAGGGT
GTGTCTGTAATTCAATGAGCATGGTGTTTGAGATTTTCCTGTGGATGCAG
GAATATTTGAATGTTAAGCTGAATAGAACTGGGAAGGTTGATAATCCTTG
GTTCTTCTTCGGAGCGTCTTACTCTGGAGCTTTGAGCGCTTGGTTCCGCC
TAAAGTTCCCTCATTTGACTTGTGGAAGCCTCGCTAGCTCTGCAGTTGTT
CGTGCTGTCTACGAGTTTCCTGAATTTGACAAACAGGTGAAAAACCTTCC
TTACAAGACATGTGTCTTTTCCATATAGAGTATGGAATCAAGATTATTGT
GACTCAATGAGCAGATAGGTGAGTCAGCTGGACCGGAATGTAAAGCTGCA
CTACAAGAGACTAATAAACTCGTGGAACTAGCGCTTAAAGTAAATAATAA
GGCTCTGAAAGCTCTCTTCAATTCCACCGAGGTCTAGCTTTCTTCTTTCT
CTTGAATCCAAGAAGTAAAAACTCTTGTCTCCGAATCTGATTAAGTCTCT
GAAAATCTGCAGCTTGATGTTGATGGTGATTTCTTATACTTCGTAGCGGA
TGCACAAGTCATGGCGGTAATAATATACATACATGTTCATCTATATGATT
CTCATTTTGTTTCTAGTTTTTAAATATTTTATTTTTACAATTTGGTAGTT
CCAATACGGAAACCCAGATAAGTTATGTGTTCCTATGGTGGATGCCAAGA
AGAGCGGTGGTGATTTAGTGGTAACTTCCCCTTTTATATGATCACAGATC
CTTTATTATTGTGGATATGTGTGACACATTATTTTGAATATGTATCAATC
CAGGAAGCATATGCTAAATACGTTAGAGAGTATTGCTTCGGAGTTTTTGG
GTTAAGCGCTAAAACATATAGCAGGAAGCATCTGCTAGATACTGCGATCA
CCCCAGAGAGCGCAGATCGTCTGTGGTGGTTCCAAGTTTGCACTGAAGTG
GCGTATTTCCAGGTGGCACCTGCAAACGATAGCATCCGGTCTCATCAAGT
CAACACAGAGTAAACACACAGCCACAAACTCTTGTGTAACGTTTCAGTTC
ATCATCCCGTTTACATTTTTCTTGGTGATTTTTTTTTAAAAGGTATCATT
TGGATCTATGCAAGACTCTGTTTGGTAAAGGTGTTTATCCTGAAGTCGAT
GCAACAAACCTGTACTATGGAGGTGATAGAATTGCTGGTATGTAACACTG
AGATGAATGCTCTTCTTGTTCCTTTAGGACATTCCGACAGCTTATTTGGG
TCGTGGTGTTCTCAATTTTTGCAGCTACGAAAATTGTTTTCACGAATGGG
TCACAAGATCCATGGCGTCATGCATCCAAACAGACCTCATCTCCTGACCG
TAAGTCTCCATTTACTTTGTTCAACATTGATTCTTGACGTTAAGTAGCAT
TAACAAGTTAGTGCTCGACGACACAGTGCCTTCTTACATCATCACTTGTC
ACAACTGTGGCCATGGAAGTGATCTTCGAGGATGCCCTCAGTCTCCATTG
ATCATCGAAGGTATATATATTACCAGCCTCTCATTCTTTCAGATGCTTAA
ACTGCAAGTAAAGACGGTACTTAAAACAACTTTTTGTATCGTTTCTTATT
TTCAGGTGATTCCAAGAACTGCAGTTCGCCAGATGCTGTGAATAAAGTGA
GGCAACATATAATAGAACACATGGACTTGTGGCTCTCTGAGTGCCGTGGA
GTGCTTCGAAGTTCCATCTAG back to topCoding sequence (CDS) from alignment at C1:1456689..1459059- >BolC1t00264H-R ID=BolC1t00264H-R|Name=BolC1t00264H-R|organism=Brassica oleracea HDEM|type=CDS|length=1470bp|location=Sequence derived from alignment at C1:1456689..1459059- (Brassica oleracea HDEM) ATGGCGACGACGGCGATAGGCTTTCTGATGCTCTTGTCATACTTCTTGAG CTTGTCCCATGGATTAGTACAACCCCGTAGGATCTCTCATGGTTTGTCCG AAAGCGGAAAGTACTTGACGAGAGATGAGCTCTGGTTCAATCAAACCCTT GACCACTTCTCTCCATATGACCATCGCAGATTCAGACAGAGATACTATGA ATATCTAGATCATTTACGAGTTCCTGATGGACCTATATTTCTGATGATCT GCGGCGAAGGCCCTTGCTATGGAATACCAAATGATTATATAAGTGTGTTA GCGAAGAAGTTCGACGCAGGTGTTGTTTCACTCGAGCATCGTTACTATGG AAAAAGCTCACCTTTTAACTCATTAGCCACTGAGAATCTCAAGTATCTTT CATCTAAACAAGCCCTTTCCGATTTAGCTGCTTTTCGTGGATATTACCAG GCAAGTTTTCTTGAATATTTGAATGTTAAGCTGAATAGAACTGGGAAGGT TGATAATCCTTGGTTCTTCTTCGGAGCGTCTTACTCTGGAGCTTTGAGCG CTTGGTTCCGCCTAAAGTTCCCTCATTTGACTTGTGGAAGCCTCGCTAGC TCTGCAGTTGTTCGTGCTGTCTACGAGTTTCCTGAATTTGACAAACAGCA GATAGGTGAGTCAGCTGGACCGGAATGTAAAGCTGCACTACAAGAGACTA ATAAACTCGTGGAACTAGCGCTTAAAGTAAATAATAAGGCTCTGAAAGCT CTCTTCAATTCCACCGAGCTTGATGTTGATGGTGATTTCTTATACTTCGT AGCGGATGCACAAGTCATGGCGTTCCAATACGGAAACCCAGATAAGTTAT GTGTTCCTATGGTGGATGCCAAGAAGAGCGGTGGTGATTTAGTGGAAGCA TATGCTAAATACGTTAGAGAGTATTGCTTCGGAGTTTTTGGGTTAAGCGC TAAAACATATAGCAGGAAGCATCTGCTAGATACTGCGATCACCCCAGAGA GCGCAGATCGTCTGTGGTGGTTCCAAGTTTGCACTGAAGTGGCGTATTTC CAGGTGGCACCTGCAAACGATAGCATCCGGTCTCATCAAGTCAACACAGA GTATCATTTGGATCTATGCAAGACTCTGTTTGGTAAAGGTGTTTATCCTG AAGTCGATGCAACAAACCTGTACTATGGAGGTGATAGAATTGCTGCTACG AAAATTGTTTTCACGAATGGGTCACAAGATCCATGGCGTCATGCATCCAA ACAGACCTCATCTCCTGACCTGCCTTCTTACATCATCACTTGTCACAACT GTGGCCATGGAAGTGATCTTCGAGGATGCCCTCAGTCTCCATTGATCATC GAAGGTGATTCCAAGAACTGCAGTTCGCCAGATGCTGTGAATAAAGTGAG GCAACATATAATAGAACACATGGACTTGTGGCTCTCTGAGTGCCGTGGAG TGCTTCGAAGTTCCATCTAG back to top
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