Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Cds size | 1176 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| BolC1t00217H | BolC1t00217H | Brassica oleracea HDEM | gene | C1 1182580..1185538 + |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| BolC1t00217H | BolC1t00217H | Brassica oleracea HDEM | CDS | C1 1182580..1182806 + |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >BolC1t00217H-R ID=BolC1t00217H-R|Name=BolC1t00217H-R|organism=Brassica oleracea HDEM|type=mRNA|length=1176bp|location=Sequence derived from alignment at C1:1182580..1185538+ (Brassica oleracea HDEM)|Notes=Excludes all bases but those of type(s): exon.
ATGGTGTATGCAGGTTACTGCTTGAAGGAGAAGAAGACATGTGTGAGATG
GGTGGAGAGATACTTCGACGACTGTCTCTGTAACCTGAACGACGAAGTCT
CGTTCGCACTTGGAATCGTTAGCCTTATCTGCTGGGGCGTGGCAGAGATT
CCTCAGATCATTACCAACTTCCGTACAAAGTCCAGTCATGGTGTCTCTCT
GTCTTTCCTCCTCGCTTGGGTCGCCGGTGATATCTTCAATCTCATCGGGT
GTCTTCTTGAACCAGCTACCTTGCCGACTCAGTTCTACACAGCCTTGCTT
TACACAGTGAGCACCGTGGTATTGGTGATCCAGACAATCTACTACGACTA
TATCTACAGACTTTGTACACATAGACGCACCAAGATCTGTCAAAAGGATG
AAGAAGATGAAGAGAAGAGACCATTAAACCCACCGAAGACGATGGGATCT
GCTATTTCCATCCCAGGGGAATCTTACAAAGCTTCTCCTCGGAAAGAGTT
CTATTACACGTCAGCGAGATCATTGGCCGGAAGTGGTACACCGCCTTTAG
GAACATCGTATTTTCGGGTGGCCAAGAGCGGACCTTCGGCCATGACAATA
GATAGTGGTTCTTCCTCGGACGAAGATGAGACAATGTCGACGCTTCCTGT
TGTAACGACTAAGACCATTACCCAACCAAGGCCAATCCCAAGACAGGCTG
GTTTTGGAACGTTCTTAGCCGCATCCGTTAGCCTTCCTCTGCAGGCCAAG
AGTCTAGCGGAAAAATATGCACATGCTTCAAGCAGACGGCTTCTAAATGA
AAGAAGAGTTGAGCATAGTGCATTGGGACAATGGTTAGGATGGCTAATGG
CAGCCATTTACATGGGTGGTCGCATCCCTCAGATCTTGCTCAACATCAAA
CGAGGAAGCGTCGAGGGTTTGAATCCACTTATGTTCATATTCGCACTTGT
AGCCAATGCAACATATGTTGGTAGTATTCTTGTCAGAACAACTGAATGGG
ACAGTATCAAAGCAAATCTCCCTTGGTTGCTTGATGCTATTGTCTGCGTC
CTACTCGATCTATTTATCATATTGCAGTATATCTACTACAAGTATTTCAG
GACGAACAGTTCAAAAGGCGAAGAAGAACATGGCTACGGAGACTATGTGG
AAGCAATCAAAACTTTTGTTTCGTGA back to topprotein sequence of BolC1t00217H-R >BolC1t00217H-R-P ID=BolC1t00217H-R-P|Name=BolC1t00217H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=392bp
MVYAGYCLKEKKTCVRWVERYFDDCLCNLNDEVSFALGIVSLICWGVAEI
PQIITNFRTKSSHGVSLSFLLAWVAGDIFNLIGCLLEPATLPTQFYTALL
YTVSTVVLVIQTIYYDYIYRLCTHRRTKICQKDEEDEEKRPLNPPKTMGS
AISIPGESYKASPRKEFYYTSARSLAGSGTPPLGTSYFRVAKSGPSAMTI
DSGSSSDEDETMSTLPVVTTKTITQPRPIPRQAGFGTFLAASVSLPLQAK
SLAEKYAHASSRRLLNERRVEHSALGQWLGWLMAAIYMGGRIPQILLNIK
RGSVEGLNPLMFIFALVANATYVGSILVRTTEWDSIKANLPWLLDAIVCV
LLDLFIILQYIYYKYFRTNSSKGEEEHGYGDYVEAIKTFVS. back to topmRNA from alignment at C1:1182580..1185538+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BolC1t00217H-R ID=BolC1t00217H-R|Name=BolC1t00217H-R|organism=Brassica oleracea HDEM|type=mRNA|length=2959bp|location=Sequence derived from alignment at C1:1182580..1185538+ (Brassica oleracea HDEM)
ATGGTGTATGCAGGTTACTGCTTGAAGGAGAAGAAGACATGTGTGAGATG
GGTGGAGAGATACTTCGACGACTGTCTCTGTAACCTGAACGACGAAGTCT
CGTTCGCACTTGGAATCGTTAGCCTTATCTGCTGGGGCGTGGCAGAGATT
CCTCAGATCATTACCAACTTCCGTACAAAGTCCAGTCATGGTGTCTCTCT
GTCTTTCCTCCTCGCTTGGGTCGCCGGGTCCGTACACTCTATTATCTTTA
ATTATTATTATATATTTATAAAACTCTAGATCTCTCTAACGTTAGTTATT
TTTACGACTTTTTATCAATCGGTGCAGTGATATCTTCAATCTCATCGGGT
GTCTTCTTGAACCAGCTACCGTAAGTTGCACAACCGTACTCATACTACTA
TAGTTTAGTTTAAATCTTAATTGTTGTTTTCTCACTTTGTCTTTTCCTTT
TTTATTATTGTAGTTGCCGACTCAGTTCTACACAGCCTTGGTAAAATCGC
TGTCTACTCGCCGCATAAACATCTGTCGCCATAAAGCTTACGTGTCCTTT
TTCGCCGCATAAACATCTGTTCGACTGCTTAATTAATTTATTTATAATTT
TATATCTCAACTTCTTCTTTCTTTAGCTTTACACAGTGAGCACCGTGGTA
TTGGTGATCCAGACAATCTACTACGACTATATCTACAGACTTTGTACACA
TAGACGCACCAAGATCTGTCAAAAGGTACTAATTATGTTAATTTTAAAAG
TAATTACATATTGAGTATATATTGTAATACTCTTGGGTGTGAAATTATGT
TAAGGATGAAGAAGATGAAGAGAAGAGACCATTAAACCCACCGAAGACGA
TGGGATCTGCTATTTCCATCCCAGGGGAATCTTACAAAGCTTCTCCTCGG
AAAGAGTTCTATTACACGTACGTATTAGTAGGTCTGGGCATAAAATCCGG
AACCCGAAATCCGAACCGAACCCGAACCAAAAAACTCGATCCGTTATCCG
ATCCGAAATGTAAAAATACCCGAACGGGTTTTGTAGGGTGGTACAAAAAA
TATCCGAACCCAAAGTGTTATTAACCGAACCCGAACGAGTAACCCGAAAA
ATCCGAAATTAATAGTCAATATAAATATTTTGAAATATATATAAGTATTT
TAATTATTAAATTCAATATTTGTGGTAATATGACATATAATAATAAATAT
TAAATTTTTAATAAATGGTTTAAGTACCAATTAATAATAAATAAGTATTT
TATAATTTGCTCATTGAAATAAAAAGTCTATTCTCTATAAAGCAATACAT
ATTGTTTACAAATGATGTTTGTTTTCATGTTTGATTTAACATTTTATTGT
TATTTTATCAATTTTATGTGTGATAAATTAATTTTTATTTAATTTAGATG
CTTTTCTTTATGTTTTGGTTCAAAAATTTTGTTTTTTACTTCGATTATAT
CCGAACCGAACCGATATAACCCGAATCCGTATGATATATGATTACTTTAT
GGGTTTTAGGACGCAATACAATTTTGAACCCGAAGTGTTATTATCCGAAC
CCGGCCCGTACTAATAAAATTTTGGTATGGGACCTAGGAGCGTAAACCCG
AAAACCCGAAAAACCCGATCCGAACGCCAACGGGTACCCGAACGCCCATG
CCAACCCTATTAGTAAAAATGCTTAAATTGAATTCACTCTAACTTGATTA
CGAGTTAAGTTAAAGTTTGTGACAAGCAAATCATTTATCAATGCATTATT
TTACTCCTACACGTACGAATATGTTAATATGATTTATCAGTATATTGTCA
CATGACACTTCACCTTGGTGCTGATTTCCGGCGACTTTTTCCTTTTCAGG
TCAGCGAGATCATTGGCCGGAAGTGGTACACCGCCTTTAGGAACATCGTA
TTTTCGGGTGGCCAAGAGCGGACCTTCGGCCATGACAATAGATAGTGGTT
CTTCCTCGGACGAAGATGAGACAATGTCGACGCTTCCTGTTGTAACGACT
AAGACCATTACCCAACCAAGGCCAATCCCAAGACAGGTTTCTTGATTATA
TTCTTATTGGGAACTAAAAATCACTTTAAGCAGAAGGAACAACGATTGAC
ACGTTGTGTACTTCTTCCTCTCAGGCTGGTTTTGGAACGTTCTTAGCCGC
ATCCGTTAGCCTTCCTCTGCAGGCCAAGAGTCTAGCGGAAAAATATGCAC
ATGCTTCAAGCAGACGGCTTCTAAATGTGCGTACCTACTTATATAATGTT
TCGTTAGCATAAATGAAATTATTTCAAACATTATTTGTTGTCTCGGTATA
GGAAAGAAGAGTTGAGCATAGTGCATTGGGACAATGGTTAGGATGGCTAA
TGGCAGCCATTTACATGGGTGGTCGCATCCCTCAGATCTTGCTCAACGTA
AGCTAATTTTTGACAAGTCTAATTGATCTCTCTTTGCTTATTGTTTATGA
TAGATACTAATCTTATCTTGGTTCGGCCAATAATTTTATAAAACTAGATC
AAACGAGGAAGCGTCGAGGTAAATATCTAAACCAGACAAATCAATAAGCA
CTACAACAGTATATGATCTAATTAACAATATGTTTTGATTATTGGCAGGG
TTTGAATCCACTTATGTTCATATTCGCACTTGTAGCCAATGCAACATATG
TTGGTAGTATTCTTGTCAGAACAACTGAATGGGACAGTATCAAAGCAAAT
CTCCCTTGGTTGCTTGATGCTATTGTCTGCGTCCTACTCGATCTATTTGT
ATCCTTTTTAACCATTTTCACAGCGCCAAATTTTAAAATGACATTGCATT
CCCATTAGGTTTTATTTTGCTACCTTAATTAAAAAAAAATCAAAACAGAT
CATATTGCAGTATATCTACTACAAGTATTTCAGGACGAACAGTTCAAAAG
GCGAAGAAGAACATGGCTACGGAGACTATGTGGAAGCAATCAAAACTTTT
GTTTCGTGA back to topCoding sequence (CDS) from alignment at C1:1182580..1185538+ >BolC1t00217H-R ID=BolC1t00217H-R|Name=BolC1t00217H-R|organism=Brassica oleracea HDEM|type=CDS|length=1176bp|location=Sequence derived from alignment at C1:1182580..1185538+ (Brassica oleracea HDEM)
ATGGTGTATGCAGGTTACTGCTTGAAGGAGAAGAAGACATGTGTGAGATG
GGTGGAGAGATACTTCGACGACTGTCTCTGTAACCTGAACGACGAAGTCT
CGTTCGCACTTGGAATCGTTAGCCTTATCTGCTGGGGCGTGGCAGAGATT
CCTCAGATCATTACCAACTTCCGTACAAAGTCCAGTCATGGTGTCTCTCT
GTCTTTCCTCCTCGCTTGGGTCGCCGGTGATATCTTCAATCTCATCGGGT
GTCTTCTTGAACCAGCTACCTTGCCGACTCAGTTCTACACAGCCTTGCTT
TACACAGTGAGCACCGTGGTATTGGTGATCCAGACAATCTACTACGACTA
TATCTACAGACTTTGTACACATAGACGCACCAAGATCTGTCAAAAGGATG
AAGAAGATGAAGAGAAGAGACCATTAAACCCACCGAAGACGATGGGATCT
GCTATTTCCATCCCAGGGGAATCTTACAAAGCTTCTCCTCGGAAAGAGTT
CTATTACACGTCAGCGAGATCATTGGCCGGAAGTGGTACACCGCCTTTAG
GAACATCGTATTTTCGGGTGGCCAAGAGCGGACCTTCGGCCATGACAATA
GATAGTGGTTCTTCCTCGGACGAAGATGAGACAATGTCGACGCTTCCTGT
TGTAACGACTAAGACCATTACCCAACCAAGGCCAATCCCAAGACAGGCTG
GTTTTGGAACGTTCTTAGCCGCATCCGTTAGCCTTCCTCTGCAGGCCAAG
AGTCTAGCGGAAAAATATGCACATGCTTCAAGCAGACGGCTTCTAAATGA
AAGAAGAGTTGAGCATAGTGCATTGGGACAATGGTTAGGATGGCTAATGG
CAGCCATTTACATGGGTGGTCGCATCCCTCAGATCTTGCTCAACATCAAA
CGAGGAAGCGTCGAGGGTTTGAATCCACTTATGTTCATATTCGCACTTGT
AGCCAATGCAACATATGTTGGTAGTATTCTTGTCAGAACAACTGAATGGG
ACAGTATCAAAGCAAATCTCCCTTGGTTGCTTGATGCTATTGTCTGCGTC
CTACTCGATCTATTTATCATATTGCAGTATATCTACTACAAGTATTTCAG
GACGAACAGTTCAAAAGGCGAAGAAGAACATGGCTACGGAGACTATGTGG
AAGCAATCAAAACTTTTGTTTCGTGA back to top
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