BolC9t59924H-R-P (polypeptide) Brassica oleracea HDEM
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of BolC9t59924H-R vs. GenBank_protein
Match: VDD34601.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 182 bits (463), Expect = 2.920e-58 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 Query: 1 MSLSKKYILIAFAFTIFFAMSIVRCTDIVSGTTLKFIKYNMCYGPCDDKGVCEPYCHTKKGPIRGDFAGKRKGYLGLCCCDEH 83 MSLSKKYILIAFAFTIFFAMSIVRCTDIVSGTTLKFIKYNMCYGPCDDKGVCEPYCHTKKGPIRGDFAGKRKGYLGLCCCDEH Sbjct: 1 MSLSKKYILIAFAFTIFFAMSIVRCTDIVSGTTLKFIKYNMCYGPCDDKGVCEPYCHTKKGPIRGDFAGKRKGYLGLCCCDEH 83
BLAST of BolC9t59924H-R vs. GenBank_protein
Match: CAF1790679.1 (unnamed protein product [Brassica napus]) HSP 1 Score: 144 bits (362), Expect = 6.940e-43 Identity = 67/83 (80.72%), Postives = 72/83 (86.75%), Query Frame = 0 Query: 1 MSLSKKYILIAFAFTIFFAMSIVRCTDIVSGTTLKFIKYNMCYGPCDDKGVCEPYCHTKKGPIRGDFAGKRKGYLGLCCCDEH 83 MSLSKKYILIAF FT+FFAMSIVRCTDIVS +KYN+CYGPCDDKGVC P+C +KKG IRGD AGKRKGYLGLCCCDEH Sbjct: 1 MSLSKKYILIAFVFTLFFAMSIVRCTDIVSDFG---VKYNVCYGPCDDKGVCRPFCSSKKGLIRGDCAGKRKGYLGLCCCDEH 80
BLAST of BolC9t59924H-R vs. GenBank_protein
Match: KAG5377843.1 (hypothetical protein IGI04_025685 [Brassica rapa subsp. trilocularis]) HSP 1 Score: 137 bits (346), Expect = 1.920e-40 Identity = 66/83 (79.52%), Postives = 68/83 (81.93%), Query Frame = 0 Query: 1 MSLSKKYILIAFAFTIFFAMSIVRCTDIVSGTTLKFIKYNMCYGPCDDKGVCEPYCHTKKGPIRGDFAGKRKGYLGLCCCDEH 83 MSLSKKYILIAF FTIFFAMSIVRCTDIVS IKYNMCYGPCDDKGVCEP+C KKG RGD GK K YLG+CCCDEH Sbjct: 1 MSLSKKYILIAFVFTIFFAMSIVRCTDIVSDFG---IKYNMCYGPCDDKGVCEPFCSAKKGLKRGDCVGKAKDYLGVCCCDEH 80
BLAST of BolC9t59924H-R vs. GenBank_protein
Match: VDC95829.1 (unnamed protein product [Brassica rapa]) HSP 1 Score: 135 bits (339), Expect = 2.240e-39 Identity = 63/83 (75.90%), Postives = 68/83 (81.93%), Query Frame = 0 Query: 1 MSLSKKYILIAFAFTIFFAMSIVRCTDIVSGTTLKFIKYNMCYGPCDDKGVCEPYCHTKKGPIRGDFAGKRKGYLGLCCCDEH 83 MSLSKKYILIAF FT+FFAMSIVRCTDIVS +KYN+CYGPCDDKGVCEP+C KKG RGD GK K YLG+CCCDEH Sbjct: 1 MSLSKKYILIAFVFTLFFAMSIVRCTDIVSNFG---VKYNVCYGPCDDKGVCEPFCSAKKGLKRGDCVGKGKDYLGVCCCDEH 80
BLAST of BolC9t59924H-R vs. GenBank_protein
Match: CAF2359939.1 (unnamed protein product [Brassica napus] >CDY67525.1 BnaAnng24550D [Brassica napus] >VDD20979.1 unnamed protein product [Brassica rapa]) HSP 1 Score: 125 bits (315), Expect = 1.030e-35 Identity = 59/82 (71.95%), Postives = 65/82 (79.27%), Query Frame = 0 Query: 1 MSLSKKYILIAFAFTIFFAMSIVRCTDIVSGTTLKFIKYNMCYGPCDDKGVCEPYCHTKKGPIRGDFAGKRKGYLGLCCCDE 82 MSLSKK LIAF FT+FFAMSIVRCTDIVS +KYN+CYGPCDDKGVC P+C +KKG GD GK KGYLG+CCCDE Sbjct: 1 MSLSKKCTLIAFVFTLFFAMSIVRCTDIVSDFG---VKYNVCYGPCDDKGVCRPFCSSKKGLKMGDCVGKEKGYLGVCCCDE 79
BLAST of BolC9t59924H-R vs. GenBank_protein
Match: KAG5377371.1 (hypothetical protein IGI04_041967 [Brassica rapa subsp. trilocularis]) HSP 1 Score: 121 bits (304), Expect = 4.130e-34 Identity = 59/83 (71.08%), Postives = 64/83 (77.11%), Query Frame = 0 Query: 1 MSLSKKYILIAFAFTIFFAMSIVRCTDIVSGTTLKFIKYNMCYGPCDDKGVCEPYCHTKKGPIRGDFAGKRKGYLGLCCCDEH 83 MSLSKK ILIAF FT+FFAMSIVRCTDIVS +KYNMCYGPCDDKGVC P+C++KKGP RGD G G CCCDEH Sbjct: 1 MSLSKKCILIAFVFTLFFAMSIVRCTDIVSDFG---VKYNMCYGPCDDKGVCRPFCYSKKGPKRGDCVG------GTCCCDEH 74
BLAST of BolC9t59924H-R vs. GenBank_protein
Match: CAF2084040.1 (unnamed protein product [Brassica napus] >VDC66048.1 unnamed protein product [Brassica rapa]) HSP 1 Score: 120 bits (302), Expect = 8.330e-34 Identity = 59/83 (71.08%), Postives = 63/83 (75.90%), Query Frame = 0 Query: 1 MSLSKKYILIAFAFTIFFAMSIVRCTDIVSGTTLKFIKYNMCYGPCDDKGVCEPYCHTKKGPIRGDFAGKRKGYLGLCCCDEH 83 MSLSKKYILIAF FT+FFAMSIVRCTDIVS +KYN+CYGPCDDKG C PYCHTKKG I GD G+CCCDEH Sbjct: 1 MSLSKKYILIAFVFTLFFAMSIVRCTDIVSDFG---VKYNVCYGPCDDKGKCWPYCHTKKGLISGDCVS------GICCCDEH 74
BLAST of BolC9t59924H-R vs. GenBank_protein
Match: VDD21026.1 (unnamed protein product [Brassica rapa]) HSP 1 Score: 120 bits (301), Expect = 1.320e-33 Identity = 58/83 (69.88%), Postives = 64/83 (77.11%), Query Frame = 0 Query: 1 MSLSKKYILIAFAFTIFFAMSIVRCTDIVSGTTLKFIKYNMCYGPCDDKGVCEPYCHTKKGPIRGDFAGKRKGYLGLCCCDEH 83 MSLSKK ILIAF FT+FFAMSIVRCTDIVS +KYN+CYGPCDDKGVC P+C++KKGP RGD G G CCCDEH Sbjct: 1 MSLSKKCILIAFVFTLFFAMSIVRCTDIVSDFG---VKYNLCYGPCDDKGVCRPFCYSKKGPKRGDCVG------GTCCCDEH 74
BLAST of BolC9t59924H-R vs. GenBank_protein
Match: CAF2359904.1 (unnamed protein product [Brassica napus] >CDY67526.1 BnaAnng24560D [Brassica napus]) HSP 1 Score: 117 bits (293), Expect = 2.080e-32 Identity = 57/83 (68.67%), Postives = 64/83 (77.11%), Query Frame = 0 Query: 1 MSLSKKYILIAFAFTIFFAMSIVRCTDIVSGTTLKFIKYNMCYGPCDDKGVCEPYCHTKKGPIRGDFAGKRKGYLGLCCCDEH 83 MS+S+K ILIAF FT+FFAMSIV CTDIVS +K YN+CYGPCDDKGVCEP+C+TKKGPIRGD G G CCC EH Sbjct: 1 MSISEKCILIAFVFTLFFAMSIVSCTDIVSDFGVKKA-YNLCYGPCDDKGVCEPFCYTKKGPIRGDCVG------GTCCCAEH 76
BLAST of BolC9t59924H-R vs. GenBank_protein
Match: CAF1790620.1 (unnamed protein product [Brassica napus] >CDY66517.1 BnaCnng51150D [Brassica napus]) HSP 1 Score: 117 bits (292), Expect = 2.790e-32 Identity = 57/83 (68.67%), Postives = 62/83 (74.70%), Query Frame = 0 Query: 1 MSLSKKYILIAFAFTIFFAMSIVRCTDIVSGTTLKFIKYNMCYGPCDDKGVCEPYCHTKKGPIRGDFAGKRKGYLGLCCCDEH 83 MSLSKK I IAF FT+FFAMSIVRCTD VS +KYN+CYGPCDDKG+C PYCHTKKG IRGD G+CCCDEH Sbjct: 1 MSLSKKCISIAFVFTLFFAMSIVRCTDTVSDFG---VKYNVCYGPCDDKGMCYPYCHTKKGLIRGDCVS------GICCCDEH 74 The following BLAST results are available for this feature:
BLAST of BolC9t59924H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR) Total hits: 16 ZOOMx 1POSITION0
Pagesback to topInterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BolC9t59924H-R-P ID=BolC9t59924H-R-P|Name=BolC9t59924H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=84bpback to top Orthology
View orthology data for BolC9t59924H-R-P
|