BolC9t59569H-R-P (polypeptide) Brassica oleracea HDEM
Overview
Homology
BLAST of BolC9t59569H-R vs. GenBank_protein
Match: VDD34246.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 549 bits (1414), Expect = 2.430e-196 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0 Query: 1 MLREMPLRMNDQCAADEVMSLQKEEGNGTLTENRAKRKACGGNDINFIEVSDAGGKACLSVTTVKIRSKEGVAIELEVALGNGGSEGRIEANTTGHEVVVVDEQNDVLMEESCKGEENLRERNSKQGEPKVHRTSNMVKEACEEVKSVAYKRLWECQTEAFSNIIALEEMLKQCREKDQQKKAVSEIDDVSRLPLSRESCEELRKLAQKIESQLSEIIGSYAEAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKEREIDSQINQRAKKRRVRRLQGIGVLRKSPRLQKLI 294 MLREMPLRMNDQCAADEVMSLQKEEGNGTLTENRAKRKACGGNDINFIEVSDAGGKACLSVTTVKIRSKEGVAIELEVALGNGGSEGRIEANTTGHEVVVVDEQNDVLMEESCKGEENLRERNSKQGEPKVHRTSNMVKEACEEVKSVAYKRLWECQTEAFSNIIALEEMLKQCREKDQQKKAVSEIDDVSRLPLSRESCEELRKLAQKIESQLSEIIGSYAEAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKEREIDSQINQRAKKRRVRRLQGIGVLRKSPRLQKLI Sbjct: 1 MLREMPLRMNDQCAADEVMSLQKEEGNGTLTENRAKRKACGGNDINFIEVSDAGGKACLSVTTVKIRSKEGVAIELEVALGNGGSEGRIEANTTGHEVVVVDEQNDVLMEESCKGEENLRERNSKQGEPKVHRTSNMVKEACEEVKSVAYKRLWECQTEAFSNIIALEEMLKQCREKDQQKKAVSEIDDVSRLPLSRESCEELRKLAQKIESQLSEIIGSYAEAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKEREIDSQINQRAKKRRVRRLQGIGVLRKSPRLQKLI 294
BLAST of BolC9t59569H-R vs. GenBank_protein
Match: XP_013608494.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC106315302, partial [Brassica oleracea var. oleracea]) HSP 1 Score: 526 bits (1355), Expect = 3.160e-186 Identity = 288/309 (93.20%), Postives = 289/309 (93.53%), Query Frame = 0 Query: 3 REMPLRMNDQCAADEVMSLQKEEGNG-----------------TLTENRAKRKACGGNDINFIEVSDAGGKACLSVTTVKIRSKEGVAIELEVALGNGGSEGRIEANTTGHEVVVVDEQNDVLMEESCKGEENLRERNSKQGEPKVHRTSNMVKEACEEVKSVAYKRLWECQTEAFSNIIALEEMLKQCREKDQQKKAVSEIDDVSRLPLSRESCEELRKLAQKIESQLSEIIGSYAEAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKEREIDSQINQRAKKRRVRRLQGIGVLRKSPRLQKLI 294 R MPLRMNDQCAADEVMSLQKEEGN +LTENRAKRKACGGNDINFIEVSDAGGKACLSVTTVKIRSKEGVAIELEVALGNGGSEGRIEANTTGHEVVVVDEQNDVLMEESCKGEENLRERNSKQGEPKVHRTSNMVKEACEEVKSVAYKRLWECQTEAFSNIIALEEMLKQCREKDQQKKAVSEIDDVSRLPLSRESCEELRKLAQKIESQLSEIIGSYAEAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKEREIDSQINQRAKKRRVRRLQ IGVLRKSPRLQKLI Sbjct: 57 RXMPLRMNDQCAADEVMSLQKEEGNNVETLKSGNHEVGLVEERSLTENRAKRKACGGNDINFIEVSDAGGKACLSVTTVKIRSKEGVAIELEVALGNGGSEGRIEANTTGHEVVVVDEQNDVLMEESCKGEENLRERNSKQGEPKVHRTSNMVKEACEEVKSVAYKRLWECQTEAFSNIIALEEMLKQCREKDQQKKAVSEIDDVSRLPLSRESCEELRKLAQKIESQLSEIIGSYAEAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKEREIDSQINQRAKKRRVRRLQDIGVLRKSPRLQKLI 365
BLAST of BolC9t59569H-R vs. GenBank_protein
Match: KAF3501271.1 (hypothetical protein F2Q69_00045188 [Brassica cretica]) HSP 1 Score: 516 bits (1330), Expect = 9.530e-184 Identity = 280/286 (97.90%), Postives = 280/286 (97.90%), Query Frame = 0 Query: 9 MNDQCAADEVMSLQKEEGNGTLTENRAKRKACGGNDINFIEVSDAGGKACLSVTTVKIRSKEGVAIELEVALGNGGSEGRIEANTTGHEVVVVDEQNDVLMEESCKGEENLRERNSKQGEPKVHRTSNMVKEACEEVKSVAYKRLWECQTEAFSNIIALEEMLKQCREKDQQKKAVSEIDDVSRLPLSRESCEELRKLAQKIESQLSEIIGSYAEAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKEREIDSQINQRAKKRRVRRLQGIGVLRKSPRLQKLI 294 MNDQCAADEVMSLQKEEGNGT AKRKACGGNDINFIEVSDAGGKACLSVTTVKIRSKEGVAIELEVALGNGGSEGRIEANT GHEVVVVDEQNDVLMEESCKGEENLRERNSKQGEPKVHRTSNMVKEACEEVKSVAYKRLWECQTEAFSNIIALEEMLKQCREKDQQKKAVSEIDDVSRLPLSRESCEELRKLAQKIESQLSEIIGSYAEAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKEREIDSQINQRAKKRRVRRLQGIGVLRKSPRLQKLI Sbjct: 1 MNDQCAADEVMSLQKEEGNGT-----AKRKACGGNDINFIEVSDAGGKACLSVTTVKIRSKEGVAIELEVALGNGGSEGRIEANTKGHEVVVVDEQNDVLMEESCKGEENLRERNSKQGEPKVHRTSNMVKEACEEVKSVAYKRLWECQTEAFSNIIALEEMLKQCREKDQQKKAVSEIDDVSRLPLSRESCEELRKLAQKIESQLSEIIGSYAEAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKEREIDSQINQRAKKRRVRRLQGIGVLRKSPRLQKLI 281
BLAST of BolC9t59569H-R vs. GenBank_protein
Match: XP_022569886.1 (uncharacterized protein LOC111212605 [Brassica napus] >CAF1788584.1 unnamed protein product [Brassica napus]) HSP 1 Score: 438 bits (1127), Expect = 1.470e-150 Identity = 249/297 (83.84%), Postives = 263/297 (88.55%), Query Frame = 0 Query: 4 EMPLRMNDQCAADEVMSLQKEEG---NGTLTENR--AKRKACGGNDINFIEVSDAGGKACLSVTTVKIRSKEGV-AIELEVALGNGGSEGRIEANTTGHEVVVVDEQNDVLMEESCKGEENLRERNSKQGEPKVHRTSNMVKEACEEVKSVAYKRLWECQTEAFSNIIALEEMLKQCREKDQQKKAVSEIDDVSRLPLSRESCEELRKLAQKIESQLSEIIGSYAEAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKEREIDSQINQRAKKRRVRRLQGIGVLRKSPRLQKLI 294 EMPLRMNDQCAADEVMSL+ ++G LTE+R KRKACGGND+N EVSD GGKACLSVTTVK SKE V ++E EVAL NGG+EGRIEAN+ GHE+VV+DEQNDVLMEESCKGEENLRE NSKQGEPK+HRTSNMVKEA EVKSVAYKRLWECQTEA SNIIALEEMLKQCREKDQQKKAV+EID VSRLPLS ESCEELRKLAQKIESQLSEIIGSY EAVVPCYESRGCET+ ISKEVFHETP KTSK HEQKERE SQIN RAKKRRVRRLQ IGVLRKSPRLQKLI Sbjct: 135 EMPLRMNDQCAADEVMSLRNDKGIVEERILTESRDSPKRKACGGNDVNVTEVSDTGGKACLSVTTVKTSSKEVVVSVEPEVALVNGGTEGRIEANSEGHELVVLDEQNDVLMEESCKGEENLRETNSKQGEPKLHRTSNMVKEASVEVKSVAYKRLWECQTEACSNIIALEEMLKQCREKDQQKKAVTEIDGVSRLPLSMESCEELRKLAQKIESQLSEIIGSYDEAVVPCYESRGCETKSISKEVFHETPTKTSKHHEQKERE-QSQINPRAKKRRVRRLQDIGVLRKSPRLQKLI 430
BLAST of BolC9t59569H-R vs. GenBank_protein
Match: XP_022549476.1 (uncharacterized protein LOC106419272 [Brassica napus]) HSP 1 Score: 423 bits (1088), Expect = 2.250e-144 Identity = 245/299 (81.94%), Postives = 254/299 (84.95%), Query Frame = 0 Query: 4 EMPLRMNDQCAADEVMSLQKEEGN---GTLTENRA--KRKACGGNDINFIEVSDAGGKACLSVTTVKIRSKEGVAIELEVALGNGGSEGRIEANTTG---HEVVVVDEQNDVLMEESCKGEENLRERNSKQGEPKVHRTSNMVKEACEEVKSVAYKRLWECQTEAFSNIIALEEMLKQCREKDQQKKAVSEIDDVSRLPLSRESCEELRKLAQKIESQLSEIIGSYAEAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKEREIDSQINQRAKKRRVRRLQGIGVLRKSPRLQKLI 294 EMPL MNDQCAADEVMSLQ ++G LTE+R KRKACGGNDINFIEVSD GGKACLSVTTVK RS EGVA+E EVAL G EGRIEAN+ G HE+VVVDEQNDVL+EESCKGEENLRER TSN VKEACEE KSVAYKRLWE QTEA SNIIALE+MLKQCREKDQQKK V EID VSRLPLS+ESCEELRKLAQKIESQLSEII SY EAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKEREIDSQIN RAKKRRVRRLQ IGVLRKSPRLQKLI Sbjct: 161 EMPLIMNDQCAADEVMSLQNDKGTVEERILTESRTSPKRKACGGNDINFIEVSDTGGKACLSVTTVKTRSIEGVAVESEVALEKSGGEGRIEANSEGGELHELVVVDEQNDVLIEESCKGEENLRER-----------TSNTVKEACEEGKSVAYKRLWESQTEACSNIIALEKMLKQCREKDQQKKVVIEIDGVSRLPLSKESCEELRKLAQKIESQLSEIIDSYDEAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKEREIDSQINPRAKKRRVRRLQDIGVLRKSPRLQKLI 448
BLAST of BolC9t59569H-R vs. GenBank_protein
Match: KAG5377138.1 (hypothetical protein IGI04_041734 [Brassica rapa subsp. trilocularis] >RID42519.1 hypothetical protein BRARA_J02398 [Brassica rapa]) HSP 1 Score: 415 bits (1067), Expect = 1.540e-141 Identity = 244/301 (81.06%), Postives = 253/301 (84.05%), Query Frame = 0 Query: 4 EMPLRMNDQCAADEVMSLQKEEGN---GTLTENRA--KRKACGGNDINFIEVSDAGGKACLSVTTVKIRSKEGVAIELEVALGNGGSEGRIEANTTG---HEVVVVDEQNDVLMEESCKGEENLRERNSKQGEPKVHRTSNMVKEACEEVKSVAYKRLWECQTEAFSNIIALEEMLKQCREKDQQKKAVSEIDDVSRLPLSRESCEELRKLAQKIESQLSEIIGSYAEAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKEREIDSQINQRAKKRRVRRLQGIG--VLRKSPRLQKLI 294 EMPL MNDQCAADEVMSLQ ++G LTE+R KRKACGGNDINFIEVSD GGKACLSVTTVK RS EGVA+E EVAL G EGRIEAN+ G HE+VVVDEQNDVL+EESCKGEENLRER TSN VKEACEE KSVAYKRLWE QTEA SNIIALE+MLKQCREKDQQKK V EID VSRLPLS+ESCEELRKLAQKIESQLSEII SY EAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKE EIDSQIN RAKKRRVRRLQ IG VLRKSPRLQKLI Sbjct: 135 EMPLIMNDQCAADEVMSLQNDKGTVEERILTESRTSPKRKACGGNDINFIEVSDTGGKACLSVTTVKTRSIEGVAVESEVALEKSGGEGRIEANSEGGELHELVVVDEQNDVLIEESCKGEENLRER-----------TSNTVKEACEEGKSVAYKRLWESQTEACSNIIALEKMLKQCREKDQQKKVVIEIDGVSRLPLSKESCEELRKLAQKIESQLSEIIDSYDEAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKEIEIDSQINPRAKKRRVRRLQDIGKAVLRKSPRLQKLI 424
BLAST of BolC9t59569H-R vs. GenBank_protein
Match: VDD20367.1 (unnamed protein product [Brassica rapa]) HSP 1 Score: 414 bits (1064), Expect = 4.410e-141 Identity = 243/301 (80.73%), Postives = 253/301 (84.05%), Query Frame = 0 Query: 4 EMPLRMNDQCAADEVMSLQKEEGN---GTLTENRA--KRKACGGNDINFIEVSDAGGKACLSVTTVKIRSKEGVAIELEVALGNGGSEGRIEANTTG---HEVVVVDEQNDVLMEESCKGEENLRERNSKQGEPKVHRTSNMVKEACEEVKSVAYKRLWECQTEAFSNIIALEEMLKQCREKDQQKKAVSEIDDVSRLPLSRESCEELRKLAQKIESQLSEIIGSYAEAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKEREIDSQINQRAKKRRVRRLQGIG--VLRKSPRLQKLI 294 EMPL MNDQCAADEVMSLQ ++G LTE+R KRKACGGNDINFIEVSD GGKACLSVTTVK RS EGVA+E EVAL G EGRIEAN+ G HE+VVVDEQNDVL+EESCKGEENLRER TSN +KEACEE KSVAYKRLWE QTEA SNIIALE+MLKQCREKDQQKK V EID VSRLPLS+ESCEELRKLAQKIESQLSEII SY EAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKE EIDSQIN RAKKRRVRRLQ IG VLRKSPRLQKLI Sbjct: 135 EMPLIMNDQCAADEVMSLQNDKGTVEERILTESRTSPKRKACGGNDINFIEVSDTGGKACLSVTTVKTRSIEGVAVESEVALEKSGGEGRIEANSEGGELHELVVVDEQNDVLIEESCKGEENLRER-----------TSNTMKEACEEGKSVAYKRLWESQTEACSNIIALEKMLKQCREKDQQKKVVIEIDGVSRLPLSKESCEELRKLAQKIESQLSEIIDSYDEAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKEIEIDSQINPRAKKRRVRRLQDIGKAVLRKSPRLQKLI 424
BLAST of BolC9t59569H-R vs. GenBank_protein
Match: CDY21566.1 (BnaC09g47260D [Brassica napus]) HSP 1 Score: 407 bits (1046), Expect = 1.530e-138 Identity = 230/277 (83.03%), Postives = 244/277 (88.09%), Query Frame = 0 Query: 4 EMPLRMNDQCAADEVMSLQKEEG---NGTLTENR--AKRKACGGNDINFIEVSDAGGKACLSVTTVKIRSKEGV-AIELEVALGNGGSEGRIEANTTGHEVVVVDEQNDVLMEESCKGEENLRERNSKQGEPKVHRTSNMVKEACEEVKSVAYKRLWECQTEAFSNIIALEEMLKQCREKDQQKKAVSEIDDVSRLPLSRESCEELRKLAQKIESQLSEIIGSYAEAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKEREIDSQINQRAKKRR 274 EMPLRMNDQCAADEVMSL+ ++G LTE+R KRKACGGND+N EVSD GGKACLSVTTVK SKE V ++E EVAL NGG+EGRIEAN+ GHE+VV+DEQNDVLMEESCKGEENLRE NSKQGEPK+HRTSNMVKEA EVKSVAYKRLWECQTEA SNIIALEEMLKQCREKDQQKKAV+EID VSRLPLS ESCEELRKLAQKIESQLSEIIGSY EAVVPCYESRGCET+ ISKEVFHETP KTSK HEQKERE SQIN RAKKRR Sbjct: 135 EMPLRMNDQCAADEVMSLRNDKGIVEERILTESRDSPKRKACGGNDVNVTEVSDTGGKACLSVTTVKTSSKEVVVSVEPEVALVNGGTEGRIEANSEGHELVVLDEQNDVLMEESCKGEENLRETNSKQGEPKLHRTSNMVKEASVEVKSVAYKRLWECQTEACSNIIALEEMLKQCREKDQQKKAVTEIDGVSRLPLSMESCEELRKLAQKIESQLSEIIGSYDEAVVPCYESRGCETKSISKEVFHETPTKTSKHHEQKERE-QSQINPRAKKRR 410
BLAST of BolC9t59569H-R vs. GenBank_protein
Match: XP_009122499.1 (uncharacterized protein LOC103847192 isoform X1 [Brassica rapa] >CAF2354650.1 unnamed protein product [Brassica napus]) HSP 1 Score: 400 bits (1028), Expect = 1.280e-135 Identity = 234/296 (79.05%), Postives = 249/296 (84.12%), Query Frame = 0 Query: 4 EMPLRMNDQCAADEVMSLQKEEG---NGTLTENR--AKRKACGGNDINFIEVSDAGGKACLSVTTVKIRSKEGVAIELEVALGNGGSEGRIEANTTGHEVVVVDEQNDVLMEESCKGEENLRERNSKQGEPKVHRTSNMVKEACEEVKSVAYKRLWECQTEAFSNIIALEEMLKQCREKDQQKKAVSEIDDVSRLPLSRESCEELRKLAQKIESQLSEIIGSYAEAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKEREIDSQINQRAKKRRVRRLQGIGVLRKSPRLQKLI 294 E+ LR+NDQCAADEVMSLQ ++ +LTE+R KRKACGGN IN I VS G ACLSVTTVK RS EGVA+E EVAL GSEG E+VV+DEQNDVLMEESCKGEE+LRE NSKQGEPK+HRTSNM+KEAC EVKSVAYKRLWECQTEA SNIIALE+MLKQCREK QQKKAVSEIDDVSRLPLS+ESCEELR LAQKIESQLS IIGSY EAVVPCYESRGCET+ ISKEVFHETP KTSK HEQKERE SQIN RAKKRRVRRLQ IGVLRKSPRLQKLI Sbjct: 135 EVALRVNDQCAADEVMSLQNDKRIVEERSLTESRDSPKRKACGGNYINVIGVSGTGANACLSVTTVKTRSIEGVAVESEVALEKSGSEGG-----ELRELVVLDEQNDVLMEESCKGEESLRETNSKQGEPKLHRTSNMMKEACVEVKSVAYKRLWECQTEACSNIIALEKMLKQCREKGQQKKAVSEIDDVSRLPLSKESCEELRNLAQKIESQLSGIIGSYDEAVVPCYESRGCETKSISKEVFHETPTKTSKHHEQKERE-QSQINPRAKKRRVRRLQDIGVLRKSPRLQKLI 424
BLAST of BolC9t59569H-R vs. GenBank_protein
Match: XP_033137471.1 (uncharacterized protein LOC103847192 isoform X2 [Brassica rapa]) HSP 1 Score: 374 bits (960), Expect = 1.820e-125 Identity = 225/296 (76.01%), Postives = 239/296 (80.74%), Query Frame = 0 Query: 4 EMPLRMNDQCAADEVMSLQKEEG---NGTLTENR--AKRKACGGNDINFIEVSDAGGKACLSVTTVKIRSKEGVAIELEVALGNGGSEGRIEANTTGHEVVVVDEQNDVLMEESCKGEENLRERNSKQGEPKVHRTSNMVKEACEEVKSVAYKRLWECQTEAFSNIIALEEMLKQCREKDQQKKAVSEIDDVSRLPLSRESCEELRKLAQKIESQLSEIIGSYAEAVVPCYESRGCETEGISKEVFHETPMKTSKQHEQKEREIDSQINQRAKKRRVRRLQGIGVLRKSPRLQKLI 294 E+ LR+NDQCAADEVMSLQ ++ +LTE+R KRKACGGN IN I VS G ACLSVTTVK RS EGVA+E EVAL GSEG E+VV+DEQNDVLMEESCKGEE+LRER TSNM+KEAC EVKSVAYKRLWECQTEA SNIIALE+MLKQCREK QQKKAVSEIDDVSRLPLS+ESCEELR LAQKIESQLS IIGSY EAVVPCYESRGCET+ ISKEVFHETP KTSK HEQKERE SQIN RAKKRRVRRLQ IGVLRKSPRLQKLI Sbjct: 135 EVALRVNDQCAADEVMSLQNDKRIVEERSLTESRDSPKRKACGGNYINVIGVSGTGANACLSVTTVKTRSIEGVAVESEVALEKSGSEGG-----ELRELVVLDEQNDVLMEESCKGEESLRER-----------TSNMMKEACVEVKSVAYKRLWECQTEACSNIIALEKMLKQCREKGQQKKAVSEIDDVSRLPLSKESCEELRNLAQKIESQLSGIIGSYDEAVVPCYESRGCETKSISKEVFHETPTKTSKHHEQKERE-QSQINPRAKKRRVRRLQDIGVLRKSPRLQKLI 413 The following BLAST results are available for this feature:
BLAST of BolC9t59569H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR) Total hits: 20
Pagesback to topGO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BolC9t59569H-R-P ID=BolC9t59569H-R-P|Name=BolC9t59569H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=295bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
Orthology
View orthology data for BolC9t59569H-R-P
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