Bnascaffold815T0000100WE-P (polypeptide) Brassica napus Westar

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Bnascaffold815T0000100WE
Unique Name	Bnascaffold815T0000100WE-P
Type	polypeptide
Organism	Brassica napus Westar (cv. Westar, rapeseed)
Sequence length	56

Homology

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BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Match: KAF8093599.1 (hypothetical protein N665_0383s0222 [Sinapis alba])

HSP 1 Score: 129 bits (323), Expect = 1.960e-37
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0

Query:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55
            MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS
Sbjct:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55

[Close]

BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Match: KAF8083112.1 (hypothetical protein N665_0791s0009 [Sinapis alba])

HSP 1 Score: 129 bits (323), Expect = 2.860e-37
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0

Query:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55
            MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS
Sbjct:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55

[Close]

BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Match: KAG2313771.1 (hypothetical protein Bca52824_016893 [Brassica carinata])

HSP 1 Score: 129 bits (323), Expect = 1.200e-36
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0

Query:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55
            MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS
Sbjct:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55

[Close]

BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Match: VDD24899.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 124 bits (312), Expect = 4.600e-36
Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0

Query:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55
            MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTN RPPIL++IWDGS
Sbjct:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNHRPPILTKIWDGS 55

[Close]

BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Match: KAG2313786.1 (hypothetical protein Bca52824_016908 [Brassica carinata])

HSP 1 Score: 129 bits (323), Expect = 4.950e-36
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0

Query:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55
            MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS
Sbjct:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55

[Close]

BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Match: KAG2255548.1 (hypothetical protein Bca52824_074842 [Brassica carinata])

HSP 1 Score: 123 bits (309), Expect = 1.490e-34
Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 0

Query:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55
            MKNVAKCDTWCELQN VNHRVFERKLRPKPS RGHVCLGVTNRRPPILSRIWDGS
Sbjct:    1 MKNVAKCDTWCELQNTVNHRVFERKLRPKPSSRGHVCLGVTNRRPPILSRIWDGS 55

[Close]

BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Match: VDC71408.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 120 bits (301), Expect = 2.200e-34
Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 0

Query:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55
            MKNVA CDTWCELQNPVNHRVF+R LRPKPSGRGHVCLGVTN RPPILSRIWDGS
Sbjct:    1 MKNVAICDTWCELQNPVNHRVFDRMLRPKPSGRGHVCLGVTNHRPPILSRIWDGS 55

[Close]

BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Match: QCE14248.1 (hypothetical protein DEO72_LG11g1247 [Vigna unguiculata])

HSP 1 Score: 122 bits (306), Expect = 4.640e-34
Identity = 53/55 (96.36%), Postives = 54/55 (98.18%), Query Frame = 0

Query:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55
            MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSR+ DGS
Sbjct:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRMRDGS 55

[Close]

BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Match: VDC61024.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 119 bits (297), Expect = 8.990e-34
Identity = 49/54 (90.74%), Postives = 52/54 (96.30%), Query Frame = 0

Query:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDG 54
            M+NVAKCDTWCELQNP+NHRVFE K+ PKPSGRGHVCLGVTNRRPPILSRIWDG
Sbjct:    1 MQNVAKCDTWCELQNPLNHRVFECKMHPKPSGRGHVCLGVTNRRPPILSRIWDG 54

[Close]

BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Match: CDY55729.1 (BnaC08g46150D [Brassica napus])

HSP 1 Score: 129 bits (323), Expect = 1.290e-33
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0

Query:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55
            MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS
Sbjct:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55

The following BLAST results are available for this feature:

BLAST of Bnascaffold815T0000100WE vs. GenBank_protein

BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Analysis Date: 2022-04-13 (Diamond on OGS1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
KAF8093599.1	1.960e-37	100.00	hypothetical protein N665_0383s0222 [Sinapis alba]	[more]
KAF8083112.1	2.860e-37	100.00	hypothetical protein N665_0791s0009 [Sinapis alba]	[more]
KAG2313771.1	1.200e-36	100.00	hypothetical protein Bca52824_016893 [Brassica car...	[more]
VDD24899.1	4.600e-36	94.55	unnamed protein product [Brassica rapa]	[more]
KAG2313786.1	4.950e-36	100.00	hypothetical protein Bca52824_016908 [Brassica car...	[more]
KAG2255548.1	1.490e-34	96.36	hypothetical protein Bca52824_074842 [Brassica car...	[more]
VDC71408.1	2.200e-34	92.73	unnamed protein product [Brassica rapa]	[more]
QCE14248.1	4.640e-34	96.36	hypothetical protein DEO72_LG11g1247 [Vigna unguic...	[more]
VDC61024.1	8.990e-34	90.74	unnamed protein product [Brassica rapa]	[more]
CDY55729.1	1.290e-33	100.00	BnaC08g46150D [Brassica napus]	[more]

Pages

InterPro

Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-04-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33220	BNAA09G04420D PROTEIN	coord: 1..48

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold815	contig	scaffold815:2169..2336 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Interproscan on OGS1.0	2022-04-13 .72417
Diamond on OGS1.0 vs NR	2022-04-13 .782894
Brassica napus Westar OGS1.0	2022-04-13 .642364

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Bnascaffold815T0000100WE	Bnascaffold815T0000100WE	Brassica napus Westar	mRNA	scaffold815 2169..2336 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Bnascaffold815T0000100WE-P ID=Bnascaffold815T0000100WE-P|Name=Bnascaffold815T0000100WE|organism=Brassica napus Westar|type=polypeptide|length=56bp
MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSR
IWDGS.

Orthology

View orthology data for Bnascaffold815T0000100WE-P