Bnascaffold815T0000100WE-P (polypeptide) Brassica napus Westar

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameBnascaffold815T0000100WE
Unique NameBnascaffold815T0000100WE-P
Typepolypeptide
OrganismBrassica napus Westar (cv. Westar, rapeseed)
Sequence length56
Homology
BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Match: KAF8093599.1 (hypothetical protein N665_0383s0222 [Sinapis alba])

HSP 1 Score: 129 bits (323), Expect = 1.960e-37
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
Query:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55
            MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS
Sbjct:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55          
BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Match: KAF8083112.1 (hypothetical protein N665_0791s0009 [Sinapis alba])

HSP 1 Score: 129 bits (323), Expect = 2.860e-37
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
Query:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55
            MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS
Sbjct:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55          
BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Match: KAG2313771.1 (hypothetical protein Bca52824_016893 [Brassica carinata])

HSP 1 Score: 129 bits (323), Expect = 1.200e-36
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
Query:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55
            MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS
Sbjct:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55          
BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Match: VDD24899.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 124 bits (312), Expect = 4.600e-36
Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0
Query:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55
            MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTN RPPIL++IWDGS
Sbjct:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNHRPPILTKIWDGS 55          
BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Match: KAG2313786.1 (hypothetical protein Bca52824_016908 [Brassica carinata])

HSP 1 Score: 129 bits (323), Expect = 4.950e-36
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
Query:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55
            MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS
Sbjct:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55          
BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Match: KAG2255548.1 (hypothetical protein Bca52824_074842 [Brassica carinata])

HSP 1 Score: 123 bits (309), Expect = 1.490e-34
Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 0
Query:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55
            MKNVAKCDTWCELQN VNHRVFERKLRPKPS RGHVCLGVTNRRPPILSRIWDGS
Sbjct:    1 MKNVAKCDTWCELQNTVNHRVFERKLRPKPSSRGHVCLGVTNRRPPILSRIWDGS 55          
BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Match: VDC71408.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 120 bits (301), Expect = 2.200e-34
Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 0
Query:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55
            MKNVA CDTWCELQNPVNHRVF+R LRPKPSGRGHVCLGVTN RPPILSRIWDGS
Sbjct:    1 MKNVAICDTWCELQNPVNHRVFDRMLRPKPSGRGHVCLGVTNHRPPILSRIWDGS 55          
BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Match: QCE14248.1 (hypothetical protein DEO72_LG11g1247 [Vigna unguiculata])

HSP 1 Score: 122 bits (306), Expect = 4.640e-34
Identity = 53/55 (96.36%), Postives = 54/55 (98.18%), Query Frame = 0
Query:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55
            MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSR+ DGS
Sbjct:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRMRDGS 55          
BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Match: VDC61024.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 119 bits (297), Expect = 8.990e-34
Identity = 49/54 (90.74%), Postives = 52/54 (96.30%), Query Frame = 0
Query:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDG 54
            M+NVAKCDTWCELQNP+NHRVFE K+ PKPSGRGHVCLGVTNRRPPILSRIWDG
Sbjct:    1 MQNVAKCDTWCELQNPLNHRVFECKMHPKPSGRGHVCLGVTNRRPPILSRIWDG 54          
BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Match: CDY55729.1 (BnaC08g46150D [Brassica napus])

HSP 1 Score: 129 bits (323), Expect = 1.290e-33
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
Query:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55
            MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS
Sbjct:    1 MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSRIWDGS 55          
The following BLAST results are available for this feature:
BLAST of Bnascaffold815T0000100WE vs. GenBank_protein
Analysis Date: 2022-04-13 (Diamond on OGS1.0 vs NR)
Total hits: 20
Match NameE-valueIdentityDescription
KAF8093599.11.960e-37100.00hypothetical protein N665_0383s0222 [Sinapis alba][more]
KAF8083112.12.860e-37100.00hypothetical protein N665_0791s0009 [Sinapis alba][more]
KAG2313771.11.200e-36100.00hypothetical protein Bca52824_016893 [Brassica car... [more]
VDD24899.14.600e-3694.55unnamed protein product [Brassica rapa][more]
KAG2313786.14.950e-36100.00hypothetical protein Bca52824_016908 [Brassica car... [more]
KAG2255548.11.490e-3496.36hypothetical protein Bca52824_074842 [Brassica car... [more]
VDC71408.12.200e-3492.73unnamed protein product [Brassica rapa][more]
QCE14248.14.640e-3496.36hypothetical protein DEO72_LG11g1247 [Vigna unguic... [more]
VDC61024.18.990e-3490.74unnamed protein product [Brassica rapa][more]
CDY55729.11.290e-33100.00BnaC08g46150D [Brassica napus][more]

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InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-04-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33220BNAA09G04420D PROTEINcoord: 1..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold815contigscaffold815:2169..2336 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Interproscan on OGS1.02022-04-13 .72417
Diamond on OGS1.0 vs NR2022-04-13 .782894
Brassica napus Westar OGS1.02022-04-13 .642364
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Bnascaffold815T0000100WEBnascaffold815T0000100WEBrassica napus WestarmRNAscaffold815 2169..2336 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Bnascaffold815T0000100WE-P ID=Bnascaffold815T0000100WE-P|Name=Bnascaffold815T0000100WE|organism=Brassica napus Westar|type=polypeptide|length=56bp
MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHVCLGVTNRRPPILSR
IWDGS.
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