BraAnng001430.3.5C.1 (mRNA) Brassica rapa chifu

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	BraAnng001430.3.5C.1
Unique Name	BraAnng001430.3.5C.1
Type	mRNA
Organism	Brassica rapa chifu (field mustard)

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Scaffold0276	contig	Scaffold0276:24962..30383 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Brassica rapa chifu OGS3.5	2021-11-28

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
BraAnng001430.3.5C	BraAnng001430.3.5C	Brassica rapa chifu	gene	Scaffold0276 24962..112874 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
BraAnng001430.3.5C.1.exon1	BraAnng001430.3.5C.1.exon1	Brassica rapa chifu	exon	Scaffold0276 24962..30383 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
BraAnng001430.3.5C.1.utr3p1	BraAnng001430.3.5C.1.utr3p1	Brassica rapa chifu	three_prime_UTR	Scaffold0276 24962..26099 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
cds.BraAnng001430.3.5C.1	cds.BraAnng001430.3.5C.1	Brassica rapa chifu	CDS	Scaffold0276 26100..28073 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
BraAnng001430.3.5C.1.utr5p1	BraAnng001430.3.5C.1.utr5p1	Brassica rapa chifu	five_prime_UTR	Scaffold0276 28074..30383 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
BraAnng001430.3.5C.1	BraAnng001430.3.5C.1-P1	Brassica rapa chifu	polypeptide	Scaffold0276 26100..28073 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold0276:24962..30383-
coding sequence from alignment at Scaffold0276:24962..30383-

spliced messenger RNA

>BraAnng001430.3.5C.1 ID=BraAnng001430.3.5C.1|Name=BraAnng001430.3.5C.1|organism=Brassica rapa chifu|type=mRNA|length=5422bp|location=Sequence derived from alignment at Scaffold0276:24962..30383- (Brassica rapa chifu)|Notes=Excludes all bases but those of type(s): exon.  
ATAGCATGAACTCTTCCCCAATGTAAACATTTCCTGCCTAACAGATTTGT
AGACGTCCAGGAAGCTTAAGATCTTAACAAGAAAGATATAGGCGATGGCG
TCGCCAATTGCATGAAAGAAAGGCCTTTTAGGGGAGTTGGCTCGTGTGTG
GAGTGAATTCCTCTGTCCTGTGTGCGGAAGGCATATGAAGTAGTCCAGTA
AGGATTCAAGTCAGGTTGTATTTGGATTTTGCAACTCGGAAATTATCATA
GATTTATGATCCTTTCCTTACCCTACTGCCTATAAACATTCAAAATATGC
AAAATAGCCCTTATATAAATATAACCAAGCCGATCTACGAGTGGATATTG
CCTTTTTTTTCATCGGCGATCTTTCATGGAGTTGCCGAAGCCAGAAAATC
TGCTAATGCAATCCGCAGAATTACATCAGATCAAGGTGTGGATCTATTTC
GAACAAGTGATATCCAAGAAGAAGCCATTCGTTACTTCTCCAACCTGTTT
CAGTTTTCACCGGTGAACCACACTCGAGCCTCTATCTCATCCCTTCGCTC
TTTTATCGACTTCAGATGCTCCAACGAGATGCAAGCGAATCTTCTGCAAC
AGGTTACTACGGAGGAGATTCCAAATTGTCTTTTCAGCATGCCGCTCGAC
AAATCCCCTGGCTCGGATGGTTTTCCAGCTGACTTTTACAGATTAACTTG
GGATATTGTTGGCCCGGACTTTGTTGTTCAAACTAAAAGAAAGAACGCTA
ATCAAATTCTTGTTATTAAAGGTCCGATCTGATGTTTACGATTTGTTGTG
GTTAATCTTCCCCCCAATTGACTAAGTGCAAGTTAGAACATGGTAGCTTC
TGATTCACGGCCAATGAGACTCCGCTTGCGAGCTGAACTCTTTTTGGCAT
CATTCGCAGTGAGAGAAGAGAGCATACGCAGTGAAGAAGGGGGTGGAGCT
TATATTTCAAAGTATATTAAAGGTATTCTAAAATCAAGATTATCCCGACG
TGAGCAGTCACGCTGGAATATAATAGATGATACAACTTCTATGGCTTTCT
TTGAAGAATTTTCGTCTCTTAATCCAGTTTTTCATACTTTCTTATTTTAC
GGGAGGCTACCCTCTCCTTTTAGTCGAGTAAGAAATACCTCTCCTCATCT
CTCTATCCATAAAAAAGCCCTTCCCAGAGGAGAGCGGAAGCTCCAGGATG
AGTATGCCCTGGATTCCCGGATTCATTCTCGTCCTGATCCACTCTGGAAT
TTTCGGAATCTACAAAAACATTCTAGGAAAGGGCTCGTAATGATCTTCTC
AAAGATCACAAGGTGCTGAAGTGGCAGGCGTTCCTCGGGGGATCCGTAGG
TTTTTGTGAAAGGGATGCTCTTACTTATCATGTCTGAAAAGAAAAACCGA
ATTCCTCGATTTCATTCGATTCATCCACATTTCCATTTCTTGTAGAGGAA
GGCTAACTGCTTGCTGGCTGGGAGCTGTATGAGCGGTAACGTCCACGTAC
GGTTCCGTGAGAAGGGCGGTGGACAGAAATGGCCTTGGAGGAACCCCTTA
CTCTCGTCTTCAATGGGGTCTGCTCTTTTTTTTTTGGGAGAGTATGCCAA
TATGATCTTAATGAGGTGCGGAACTTTGCATCTGACATTCGTTGGGCTTC
CCTCTTCGGGAGCCTGCGTCCCGGCGTTTTTGTGCAATAAACCCCTCCGG
CCGAAGACTAGTGGTAGGTGGTCCCGCGTAGCTTTCGGAGAAGGGTAGCC
TTGTGTGTAAGCACAGCAATGAACCGCGGCGAACCCTCAGACGACCTATC
TAAGATTAGGGGGGGAGATCCTCAGTAGTGGTGACCCTTTCACTCTTCCC
ACGGACTGATACATGTACCGAATGCTCATACGGGAAAGTTGACTCCTGGG
TCTGGAACCTAGGGGGTTGCTCCGAGAAATCCTTTCTTTCTCGTCCACTC
AGGGGGGTGCGGACACACCTGCGCGGATTACAGGTGACGGTTACAAGAAT
GGCGGGGAAGTGAACAGTACCCGACGACATTCAGGGATGGATGTAGACCC
ATCGGGCAGGGATAATCATTCCGGTCCTGGGAGAGGTGCTTTAGCAACTC
GACTGAAAGAAGAAGAGAGGTGGCGACCATTTTCAAGAACCAAAAAGACT
GAACTGAGGGAAGCCCTATGAGTCACTGAAACGACGGGTTCCTCCCTTGA
TTATCAAAAAGGGGAGCAAAAAACGAGCTTTTCCCCCCTTTACAATATGA
AGAAAGAAAGAAGGGTTGAAGTTTAGACCGCTCACAGTAGTTCTACCTAT
AGAAAAGATCATGAAAGAGGCGATCAGAATGGTACTCGAATCCATTTACG
ATCCCGAGTTTCCAGACACATCGCATTTCCGCTCGGGTCAAGGCTGCCAC
TCGGTCCTAAGACGGATCAAAGAAGAGTGGGGAATCTCTCGCTGGTTTTT
AGAATTCGACATCAGGAAGTGTTTTCACACCATCGATCGACATCGACTCA
TCCAAATTTTGAAGGAAGAGATCGACGATCCCAAGTTCTTTTACTCCATT
CATAAAGTCTTTTCCGCCGGACGACTCGTAGGAGTTGAGAGGGGCCCTTA
CTCCGTCCCACACAGTGTACTACTATCGGCCCTACCAGGCAACATCTACC
TACACAAGCTCGATCAGGAGATAGGGAGGATCCGACAGAAGTATGAAATT
CCGATTGTTCAGAGAGTCAGATCGGTTCTATTAAGGACAGGTCGTCGTAT
TGATGACCAAGAAAACCCTGGAGAAGAAGCAAGCTTCAACGCTCCCCAAG
ACAACAGAGCCATCATTGTGGGGAGCGTTAAGAGCATGCAACGCAAAGCG
GCCTTTCATTCCCTTGTTTCGTCGTGGCACACCCCCCCCACAAGCACCCT
CCGGCTCAGGGGGGACCAGAAAAGGCCTTTCGTTTTCCCCCCTTCGTCGG
CCCTTGCCGTCTTCCTTAACAAGCCCTCGAGCCTTCTTTGCGCCGCCTTC
CTCATAGAAGCCGCCGGGTTGACCCCGAAGGCCGAATTCTATGGTGGAGA
ACGCTGTAATAATAATTGGGCCATGAGAGACCTTCTTAAGTATTGCAAAA
GAAAGGGCCTGCTGATAGAGCTGGGCGGGGAGGCGATACTAGTTATCAGG
TCAGAGAGAGGCCTGGCCCGTAAGCAGGCCCCCTTAAAAACCCATTACTT
AATAAGGATTTGTTACGCGCGATATGCCGACGACTTACTACTGGGAATCG
TGGGTGCCGTAGAGCTTCTCATAGAAATACAAAAACGTATCGCCCATTTC
CTACAATCCGGCCTGAACCTTTGGGTAGGCTCCGCAGGATCAACAACAAT
AGCTGCACGGAGTACGGTAGAATTCCTCGGTACGGTCATTCGGGAAGTCC
CTCCGAGGACGACTCCCATACAATTTTTGCGAGAGCTGGAAAAGCGTCTA
CGGGTAAAGCACCGTATCCATATAACTGCTTGCCACCTACGCTCCGCCAT
CCATTCAAAGTTTAGGAATCTAGGTGATAGTATCCCGATCAAACAGCTGA
CGAAGGGGATGAGCAAAACAGGGAGTCTACAGGACGGGGTTCAACTAGCG
GAGACTCTTGGAACAGCTGGAGTCAGAAGTCCCCAAGTTAGCGTATTATG
GGGGACCGTCAAGCACATCCGGCAAGGCGTTCCTCGGGGGATCTCGTTCT
TGCATAGCTCAGGTCGGAGCAACGCGTCATCGGACGTTCAACAGGTAGTC
TCACGATCGGGCACTCATGCCCGTAAGTTGTCATTGTATACTCCCCCGGG
TCGGAAGGCGGCGGGGGAGGGAGGAGGACACTGGGCGGGATCTATCAGCA
GCGAATTCCCCGTAAAGATAGAGGCACCTATAAAAAAGATACTCCGAAGG
CTTCGGGATCGAGGTATCATTAGCCGAAGAAGACCCTGGCCAATCCACGT
GGCCTGCTTGACGAACGTCAGCGACGAAGACATCGTAAATTGGTCCGCGG
GCATCGCGATAAGTCCTCTGTCCTACTACAGGTGCCGCGACAACCTTTAC
CAAGTCCGAACGATTGTCGACCACCAGATTCGCTGGTCTGCAATATTCAC
CCTAGCCCACAAGCACAAATCCTCGGCGCGGAATATAATCCCCAAGTACT
CCAAAGACTCAAATATTGTAAATCAAGAAGGTGGTAAGATCCTTGCAGAG
TTCCCCAACAGCATAGAGCTTGGGAAGCTCGGACCCGGTCAAGACCTGAA
CAAGAAGGAACACTCAACTACTAGTCTAGTCTAGTAGTCGTTTTTTTCTA
TTAGTTGCGATGCGAACAGGCGTTTACTTATGAGATTAGTTGAGTAGACT
TGCCTGAGTTGTCTGCTATAAGATAGAGCTAGTTTTGGGGTGGGGCTTTT
GACATAAAAAAGCCTATCCGGCTTGGCTTCGCTATCGCTCATGACTTGTA
TTGTAGTCGGCCCGGAATGCCTCGGTAGTCTTTCTAATGCCTTCTTCCTT
CATTCATTTTCTTTTAGTTGCGGTAGCTTCCGCGCCAGCAAGATACGGAC
AGCGAAGCCAAAGCAATACTAAACAAGCGAGAAAAGTCCTTGTTATTAGT
AAAGCGCTAACGATCAAGAAAAGGCCCCTTACTATAGATAGGCTAACACG
CCTTTACTAATTATATATAATAAGGTATTTCTCAAAGTCAAGTTTCTCGC
TTGTTTCTTTAGAAAGATTGCAGGGGCGCTCACGTTTTTTTGGCCCCTTC
CCGGCCCGGAAGTTCGCTTCCGGCGACTAGCTTTTACCGCTATCGCTTGG
ACTTGTCACTTCGTACCTTGAATCAATCAATGAATGAATGAAAACGCCTG
ACTAGGAATAGAAAGGGAGGACAGGTTGGTTCGAGGACCCCTTGGTCAAA
GGCGTTCCTCGGAGTGACTCGACTGAAAGGAGAGGGCGTAAGCATGATTC
CGGGGCGGAGCCGTATGACGCGAGAGTGTCACGTACGGTTTCTTTGAGAA
GGGTGTGATACCACCACCTATCAGGCCCGACGAGCGGTCCACGGAGCTGC
ATCCTTACTCACCTGGTCCATGTACATTGTTCTTTCCAGGAGGTTGGCCG
CCTATCCTAGATCTTCCCATTTTCAAGAAGATCCCGGGCTCGATCTGGTT
TAGTATCAAGGTTCTTCTCTTTCTGTTCCTATATATATGGGTCCGTGCAG
CATTTCCACGATATCGTTATGATCAATTAATGGGACTTGGCCGGAAAGTG
TTCTTGCCTCTATCATTAGCTCGGGTAGTCCCTGTTTCTGGTCTTTTAGT
CACCTTTCAATGGCTCCCTTAATTTGATTATGTGCGAGGAATTGCCCTCT
TGAGTAATGGGAAGCGGGCTAGTCCCCGAAAATGCCCGTTAATAAAGCAA
GTTGGGGAACAAAATCTTCCTT

protein sequence of BraAnng001430.3.5C.1

>BraAnng001430.3.5C.1-P1 ID=BraAnng001430.3.5C.1-P1|Name=BraAnng001430.3.5C.1|organism=Brassica rapa chifu|type=polypeptide|length=658bp
MKEAIRMVLESIYDPEFPDTSHFRSGQGCHSVLRRIKEEWGISRWFLEFD
IRKCFHTIDRHRLIQILKEEIDDPKFFYSIHKVFSAGRLVGVERGPYSVP
HSVLLSALPGNIYLHKLDQEIGRIRQKYEIPIVQRVRSVLLRTGRRIDDQ
ENPGEEASFNAPQDNRAIIVGSVKSMQRKAAFHSLVSSWHTPPTSTLRLR
GDQKRPFVFPPSSALAVFLNKPSSLLCAAFLIEAAGLTPKAEFYGGERCN
NNWAMRDLLKYCKRKGLLIELGGEAILVIRSERGLARKQAPLKTHYLIRI
CYARYADDLLLGIVGAVELLIEIQKRIAHFLQSGLNLWVGSAGSTTIAAR
STVEFLGTVIREVPPRTTPIQFLRELEKRLRVKHRIHITACHLRSAIHSK
FRNLGDSIPIKQLTKGMSKTGSLQDGVQLAETLGTAGVRSPQVSVLWGTV
KHIRQGVPRGISFLHSSGRSNASSDVQQVVSRSGTHARKLSLYTPPGRKA
AGEGGGHWAGSISSEFPVKIEAPIKKILRRLRDRGIISRRRPWPIHVACL
TNVSDEDIVNWSAGIAISPLSYYRCRDNLYQVRTIVDHQIRWSAIFTLAH
KHKSSARNIIPKYSKDSNIVNQEGGKILAEFPNSIELGKLGPGQDLNKKE
HSTTSLV.

mRNA from alignment at Scaffold0276:24962..30383-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>BraAnng001430.3.5C.1 ID=BraAnng001430.3.5C.1|Name=BraAnng001430.3.5C.1|organism=Brassica rapa chifu|type=mRNA|length=5422bp|location=Sequence derived from alignment at Scaffold0276:24962..30383- (Brassica rapa chifu)
ATAGCATGAACTCTTCCCCAATGTAAACATTTCCTGCCTAACAGATTTGT
AGACGTCCAGGAAGCTTAAGATCTTAACAAGAAAGATATAGGCGATGGCG
TCGCCAATTGCATGAAAGAAAGGCCTTTTAGGGGAGTTGGCTCGTGTGTG
GAGTGAATTCCTCTGTCCTGTGTGCGGAAGGCATATGAAGTAGTCCAGTA
AGGATTCAAGTCAGGTTGTATTTGGATTTTGCAACTCGGAAATTATCATA
GATTTATGATCCTTTCCTTACCCTACTGCCTATAAACATTCAAAATATGC
AAAATAGCCCTTATATAAATATAACCAAGCCGATCTACGAGTGGATATTG
CCTTTTTTTTCATCGGCGATCTTTCATGGAGTTGCCGAAGCCAGAAAATC
TGCTAATGCAATCCGCAGAATTACATCAGATCAAGGTGTGGATCTATTTC
GAACAAGTGATATCCAAGAAGAAGCCATTCGTTACTTCTCCAACCTGTTT
CAGTTTTCACCGGTGAACCACACTCGAGCCTCTATCTCATCCCTTCGCTC
TTTTATCGACTTCAGATGCTCCAACGAGATGCAAGCGAATCTTCTGCAAC
AGGTTACTACGGAGGAGATTCCAAATTGTCTTTTCAGCATGCCGCTCGAC
AAATCCCCTGGCTCGGATGGTTTTCCAGCTGACTTTTACAGATTAACTTG
GGATATTGTTGGCCCGGACTTTGTTGTTCAAACTAAAAGAAAGAACGCTA
ATCAAATTCTTGTTATTAAAGGTCCGATCTGATGTTTACGATTTGTTGTG
GTTAATCTTCCCCCCAATTGACTAAGTGCAAGTTAGAACATGGTAGCTTC
TGATTCACGGCCAATGAGACTCCGCTTGCGAGCTGAACTCTTTTTGGCAT
CATTCGCAGTGAGAGAAGAGAGCATACGCAGTGAAGAAGGGGGTGGAGCT
TATATTTCAAAGTATATTAAAGGTATTCTAAAATCAAGATTATCCCGACG
TGAGCAGTCACGCTGGAATATAATAGATGATACAACTTCTATGGCTTTCT
TTGAAGAATTTTCGTCTCTTAATCCAGTTTTTCATACTTTCTTATTTTAC
GGGAGGCTACCCTCTCCTTTTAGTCGAGTAAGAAATACCTCTCCTCATCT
CTCTATCCATAAAAAAGCCCTTCCCAGAGGAGAGCGGAAGCTCCAGGATG
AGTATGCCCTGGATTCCCGGATTCATTCTCGTCCTGATCCACTCTGGAAT
TTTCGGAATCTACAAAAACATTCTAGGAAAGGGCTCGTAATGATCTTCTC
AAAGATCACAAGGTGCTGAAGTGGCAGGCGTTCCTCGGGGGATCCGTAGG
TTTTTGTGAAAGGGATGCTCTTACTTATCATGTCTGAAAAGAAAAACCGA
ATTCCTCGATTTCATTCGATTCATCCACATTTCCATTTCTTGTAGAGGAA
GGCTAACTGCTTGCTGGCTGGGAGCTGTATGAGCGGTAACGTCCACGTAC
GGTTCCGTGAGAAGGGCGGTGGACAGAAATGGCCTTGGAGGAACCCCTTA
CTCTCGTCTTCAATGGGGTCTGCTCTTTTTTTTTTGGGAGAGTATGCCAA
TATGATCTTAATGAGGTGCGGAACTTTGCATCTGACATTCGTTGGGCTTC
CCTCTTCGGGAGCCTGCGTCCCGGCGTTTTTGTGCAATAAACCCCTCCGG
CCGAAGACTAGTGGTAGGTGGTCCCGCGTAGCTTTCGGAGAAGGGTAGCC
TTGTGTGTAAGCACAGCAATGAACCGCGGCGAACCCTCAGACGACCTATC
TAAGATTAGGGGGGGAGATCCTCAGTAGTGGTGACCCTTTCACTCTTCCC
ACGGACTGATACATGTACCGAATGCTCATACGGGAAAGTTGACTCCTGGG
TCTGGAACCTAGGGGGTTGCTCCGAGAAATCCTTTCTTTCTCGTCCACTC
AGGGGGGTGCGGACACACCTGCGCGGATTACAGGTGACGGTTACAAGAAT
GGCGGGGAAGTGAACAGTACCCGACGACATTCAGGGATGGATGTAGACCC
ATCGGGCAGGGATAATCATTCCGGTCCTGGGAGAGGTGCTTTAGCAACTC
GACTGAAAGAAGAAGAGAGGTGGCGACCATTTTCAAGAACCAAAAAGACT
GAACTGAGGGAAGCCCTATGAGTCACTGAAACGACGGGTTCCTCCCTTGA
TTATCAAAAAGGGGAGCAAAAAACGAGCTTTTCCCCCCTTTACAATATGA
AGAAAGAAAGAAGGGTTGAAGTTTAGACCGCTCACAGTAGTTCTACCTAT
AGAAAAGATCATGAAAGAGGCGATCAGAATGGTACTCGAATCCATTTACG
ATCCCGAGTTTCCAGACACATCGCATTTCCGCTCGGGTCAAGGCTGCCAC
TCGGTCCTAAGACGGATCAAAGAAGAGTGGGGAATCTCTCGCTGGTTTTT
AGAATTCGACATCAGGAAGTGTTTTCACACCATCGATCGACATCGACTCA
TCCAAATTTTGAAGGAAGAGATCGACGATCCCAAGTTCTTTTACTCCATT
CATAAAGTCTTTTCCGCCGGACGACTCGTAGGAGTTGAGAGGGGCCCTTA
CTCCGTCCCACACAGTGTACTACTATCGGCCCTACCAGGCAACATCTACC
TACACAAGCTCGATCAGGAGATAGGGAGGATCCGACAGAAGTATGAAATT
CCGATTGTTCAGAGAGTCAGATCGGTTCTATTAAGGACAGGTCGTCGTAT
TGATGACCAAGAAAACCCTGGAGAAGAAGCAAGCTTCAACGCTCCCCAAG
ACAACAGAGCCATCATTGTGGGGAGCGTTAAGAGCATGCAACGCAAAGCG
GCCTTTCATTCCCTTGTTTCGTCGTGGCACACCCCCCCCACAAGCACCCT
CCGGCTCAGGGGGGACCAGAAAAGGCCTTTCGTTTTCCCCCCTTCGTCGG
CCCTTGCCGTCTTCCTTAACAAGCCCTCGAGCCTTCTTTGCGCCGCCTTC
CTCATAGAAGCCGCCGGGTTGACCCCGAAGGCCGAATTCTATGGTGGAGA
ACGCTGTAATAATAATTGGGCCATGAGAGACCTTCTTAAGTATTGCAAAA
GAAAGGGCCTGCTGATAGAGCTGGGCGGGGAGGCGATACTAGTTATCAGG
TCAGAGAGAGGCCTGGCCCGTAAGCAGGCCCCCTTAAAAACCCATTACTT
AATAAGGATTTGTTACGCGCGATATGCCGACGACTTACTACTGGGAATCG
TGGGTGCCGTAGAGCTTCTCATAGAAATACAAAAACGTATCGCCCATTTC
CTACAATCCGGCCTGAACCTTTGGGTAGGCTCCGCAGGATCAACAACAAT
AGCTGCACGGAGTACGGTAGAATTCCTCGGTACGGTCATTCGGGAAGTCC
CTCCGAGGACGACTCCCATACAATTTTTGCGAGAGCTGGAAAAGCGTCTA
CGGGTAAAGCACCGTATCCATATAACTGCTTGCCACCTACGCTCCGCCAT
CCATTCAAAGTTTAGGAATCTAGGTGATAGTATCCCGATCAAACAGCTGA
CGAAGGGGATGAGCAAAACAGGGAGTCTACAGGACGGGGTTCAACTAGCG
GAGACTCTTGGAACAGCTGGAGTCAGAAGTCCCCAAGTTAGCGTATTATG
GGGGACCGTCAAGCACATCCGGCAAGGCGTTCCTCGGGGGATCTCGTTCT
TGCATAGCTCAGGTCGGAGCAACGCGTCATCGGACGTTCAACAGGTAGTC
TCACGATCGGGCACTCATGCCCGTAAGTTGTCATTGTATACTCCCCCGGG
TCGGAAGGCGGCGGGGGAGGGAGGAGGACACTGGGCGGGATCTATCAGCA
GCGAATTCCCCGTAAAGATAGAGGCACCTATAAAAAAGATACTCCGAAGG
CTTCGGGATCGAGGTATCATTAGCCGAAGAAGACCCTGGCCAATCCACGT
GGCCTGCTTGACGAACGTCAGCGACGAAGACATCGTAAATTGGTCCGCGG
GCATCGCGATAAGTCCTCTGTCCTACTACAGGTGCCGCGACAACCTTTAC
CAAGTCCGAACGATTGTCGACCACCAGATTCGCTGGTCTGCAATATTCAC
CCTAGCCCACAAGCACAAATCCTCGGCGCGGAATATAATCCCCAAGTACT
CCAAAGACTCAAATATTGTAAATCAAGAAGGTGGTAAGATCCTTGCAGAG
TTCCCCAACAGCATAGAGCTTGGGAAGCTCGGACCCGGTCAAGACCTGAA
CAAGAAGGAACACTCAACTACTAGTCTAGTCTAGTAGTCGTTTTTTTCTA
TTAGTTGCGATGCGAACAGGCGTTTACTTATGAGATTAGTTGAGTAGACT
TGCCTGAGTTGTCTGCTATAAGATAGAGCTAGTTTTGGGGTGGGGCTTTT
GACATAAAAAAGCCTATCCGGCTTGGCTTCGCTATCGCTCATGACTTGTA
TTGTAGTCGGCCCGGAATGCCTCGGTAGTCTTTCTAATGCCTTCTTCCTT
CATTCATTTTCTTTTAGTTGCGGTAGCTTCCGCGCCAGCAAGATACGGAC
AGCGAAGCCAAAGCAATACTAAACAAGCGAGAAAAGTCCTTGTTATTAGT
AAAGCGCTAACGATCAAGAAAAGGCCCCTTACTATAGATAGGCTAACACG
CCTTTACTAATTATATATAATAAGGTATTTCTCAAAGTCAAGTTTCTCGC
TTGTTTCTTTAGAAAGATTGCAGGGGCGCTCACGTTTTTTTGGCCCCTTC
CCGGCCCGGAAGTTCGCTTCCGGCGACTAGCTTTTACCGCTATCGCTTGG
ACTTGTCACTTCGTACCTTGAATCAATCAATGAATGAATGAAAACGCCTG
ACTAGGAATAGAAAGGGAGGACAGGTTGGTTCGAGGACCCCTTGGTCAAA
GGCGTTCCTCGGAGTGACTCGACTGAAAGGAGAGGGCGTAAGCATGATTC
CGGGGCGGAGCCGTATGACGCGAGAGTGTCACGTACGGTTTCTTTGAGAA
GGGTGTGATACCACCACCTATCAGGCCCGACGAGCGGTCCACGGAGCTGC
ATCCTTACTCACCTGGTCCATGTACATTGTTCTTTCCAGGAGGTTGGCCG
CCTATCCTAGATCTTCCCATTTTCAAGAAGATCCCGGGCTCGATCTGGTT
TAGTATCAAGGTTCTTCTCTTTCTGTTCCTATATATATGGGTCCGTGCAG
CATTTCCACGATATCGTTATGATCAATTAATGGGACTTGGCCGGAAAGTG
TTCTTGCCTCTATCATTAGCTCGGGTAGTCCCTGTTTCTGGTCTTTTAGT
CACCTTTCAATGGCTCCCTTAATTTGATTATGTGCGAGGAATTGCCCTCT
TGAGTAATGGGAAGCGGGCTAGTCCCCGAAAATGCCCGTTAATAAAGCAA
GTTGGGGAACAAAATCTTCCTT

Coding sequence (CDS) from alignment at Scaffold0276:24962..30383-

>BraAnng001430.3.5C.1 ID=BraAnng001430.3.5C.1|Name=BraAnng001430.3.5C.1|organism=Brassica rapa chifu|type=CDS|length=1974bp|location=Sequence derived from alignment at Scaffold0276:24962..30383- (Brassica rapa chifu)
ATGAAAGAGGCGATCAGAATGGTACTCGAATCCATTTACGATCCCGAGTT
TCCAGACACATCGCATTTCCGCTCGGGTCAAGGCTGCCACTCGGTCCTAA
GACGGATCAAAGAAGAGTGGGGAATCTCTCGCTGGTTTTTAGAATTCGAC
ATCAGGAAGTGTTTTCACACCATCGATCGACATCGACTCATCCAAATTTT
GAAGGAAGAGATCGACGATCCCAAGTTCTTTTACTCCATTCATAAAGTCT
TTTCCGCCGGACGACTCGTAGGAGTTGAGAGGGGCCCTTACTCCGTCCCA
CACAGTGTACTACTATCGGCCCTACCAGGCAACATCTACCTACACAAGCT
CGATCAGGAGATAGGGAGGATCCGACAGAAGTATGAAATTCCGATTGTTC
AGAGAGTCAGATCGGTTCTATTAAGGACAGGTCGTCGTATTGATGACCAA
GAAAACCCTGGAGAAGAAGCAAGCTTCAACGCTCCCCAAGACAACAGAGC
CATCATTGTGGGGAGCGTTAAGAGCATGCAACGCAAAGCGGCCTTTCATT
CCCTTGTTTCGTCGTGGCACACCCCCCCCACAAGCACCCTCCGGCTCAGG
GGGGACCAGAAAAGGCCTTTCGTTTTCCCCCCTTCGTCGGCCCTTGCCGT
CTTCCTTAACAAGCCCTCGAGCCTTCTTTGCGCCGCCTTCCTCATAGAAG
CCGCCGGGTTGACCCCGAAGGCCGAATTCTATGGTGGAGAACGCTGTAAT
AATAATTGGGCCATGAGAGACCTTCTTAAGTATTGCAAAAGAAAGGGCCT
GCTGATAGAGCTGGGCGGGGAGGCGATACTAGTTATCAGGTCAGAGAGAG
GCCTGGCCCGTAAGCAGGCCCCCTTAAAAACCCATTACTTAATAAGGATT
TGTTACGCGCGATATGCCGACGACTTACTACTGGGAATCGTGGGTGCCGT
AGAGCTTCTCATAGAAATACAAAAACGTATCGCCCATTTCCTACAATCCG
GCCTGAACCTTTGGGTAGGCTCCGCAGGATCAACAACAATAGCTGCACGG
AGTACGGTAGAATTCCTCGGTACGGTCATTCGGGAAGTCCCTCCGAGGAC
GACTCCCATACAATTTTTGCGAGAGCTGGAAAAGCGTCTACGGGTAAAGC
ACCGTATCCATATAACTGCTTGCCACCTACGCTCCGCCATCCATTCAAAG
TTTAGGAATCTAGGTGATAGTATCCCGATCAAACAGCTGACGAAGGGGAT
GAGCAAAACAGGGAGTCTACAGGACGGGGTTCAACTAGCGGAGACTCTTG
GAACAGCTGGAGTCAGAAGTCCCCAAGTTAGCGTATTATGGGGGACCGTC
AAGCACATCCGGCAAGGCGTTCCTCGGGGGATCTCGTTCTTGCATAGCTC
AGGTCGGAGCAACGCGTCATCGGACGTTCAACAGGTAGTCTCACGATCGG
GCACTCATGCCCGTAAGTTGTCATTGTATACTCCCCCGGGTCGGAAGGCG
GCGGGGGAGGGAGGAGGACACTGGGCGGGATCTATCAGCAGCGAATTCCC
CGTAAAGATAGAGGCACCTATAAAAAAGATACTCCGAAGGCTTCGGGATC
GAGGTATCATTAGCCGAAGAAGACCCTGGCCAATCCACGTGGCCTGCTTG
ACGAACGTCAGCGACGAAGACATCGTAAATTGGTCCGCGGGCATCGCGAT
AAGTCCTCTGTCCTACTACAGGTGCCGCGACAACCTTTACCAAGTCCGAA
CGATTGTCGACCACCAGATTCGCTGGTCTGCAATATTCACCCTAGCCCAC
AAGCACAAATCCTCGGCGCGGAATATAATCCCCAAGTACTCCAAAGACTC
AAATATTGTAAATCAAGAAGGTGGTAAGATCCTTGCAGAGTTCCCCAACA
GCATAGAGCTTGGGAAGCTCGGACCCGGTCAAGACCTGAACAAGAAGGAA
CACTCAACTACTAGTCTAGTCTAG

Orthology

View orthology data for BraAnng001430.3.5C.1