BraA01g004840.3.5C.9 (mRNA) Brassica rapa chifu

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameBraA01g004840.3.5C.9
Unique NameBraA01g004840.3.5C.9
TypemRNA
OrganismBrassica rapa chifu (field mustard)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A01contigA01:2271075..2278580 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Brassica rapa chifu OGS3.52021-11-28
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
BraA01g004840.3.5CBraA01g004840.3.5CBrassica rapa chifugeneA01 2270999..2278700 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
BraA01g004840.3.5C.9.utr5p1BraA01g004840.3.5C.9.utr5p1Brassica rapa chifufive_prime_UTRA01 2271075..2271122 +
BraA01g004840.3.5C.9.utr5p2BraA01g004840.3.5C.9.utr5p2Brassica rapa chifufive_prime_UTRA01 2271527..2271609 +
BraA01g004840.3.5C.9.utr5p3BraA01g004840.3.5C.9.utr5p3Brassica rapa chifufive_prime_UTRA01 2271699..2271768 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
BraA01g004840.3.5C.9.exon1BraA01g004840.3.5C.9.exon1Brassica rapa chifuexonA01 2271075..2271122 +
BraA01g004840.3.5C.9.exon2BraA01g004840.3.5C.9.exon2Brassica rapa chifuexonA01 2271527..2271609 +
BraA01g004840.3.5C.9.exon3BraA01g004840.3.5C.9.exon3Brassica rapa chifuexonA01 2271699..2272340 +
BraA01g004840.3.5C.9.exon4BraA01g004840.3.5C.9.exon4Brassica rapa chifuexonA01 2272416..2273120 +
BraA01g004840.3.5C.9.exon5BraA01g004840.3.5C.9.exon5Brassica rapa chifuexonA01 2273217..2273370 +
BraA01g004840.3.5C.9.exon6BraA01g004840.3.5C.9.exon6Brassica rapa chifuexonA01 2273485..2273829 +
BraA01g004840.3.5C.9.exon7BraA01g004840.3.5C.9.exon7Brassica rapa chifuexonA01 2273923..2274690 +
BraA01g004840.3.5C.9.exon8BraA01g004840.3.5C.9.exon8Brassica rapa chifuexonA01 2275026..2275354 +
BraA01g004840.3.5C.9.exon9BraA01g004840.3.5C.9.exon9Brassica rapa chifuexonA01 2275461..2275584 +
BraA01g004840.3.5C.9.exon10BraA01g004840.3.5C.9.exon10Brassica rapa chifuexonA01 2275678..2275827 +
BraA01g004840.3.5C.9.exon11BraA01g004840.3.5C.9.exon11Brassica rapa chifuexonA01 2276156..2277556 +
BraA01g004840.3.5C.9.exon12BraA01g004840.3.5C.9.exon12Brassica rapa chifuexonA01 2277645..2277911 +
BraA01g004840.3.5C.9.exon13BraA01g004840.3.5C.9.exon13Brassica rapa chifuexonA01 2278023..2278580 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
cds.BraA01g004840.3.5C.9cds.BraA01g004840.3.5C.9Brassica rapa chifuCDSA01 2271769..2272340 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
BraA01g004840.3.5C.9.utr3p1BraA01g004840.3.5C.9.utr3p1Brassica rapa chifuthree_prime_UTRA01 2278368..2278580 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
BraA01g004840.3.5C.9BraA01g004840.3.5C.9-P1Brassica rapa chifupolypeptideA01 2271769..2278367 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>BraA01g004840.3.5C.9 ID=BraA01g004840.3.5C.9|Name=BraA01g004840.3.5C.9|organism=Brassica rapa chifu|type=mRNA|length=5574bp|location=Sequence derived from alignment at A01:2271075..2278580+ (Brassica rapa chifu)|Notes=Excludes all bases but those of type(s): exon.  
GGGAAAAGGAAAGGAAAGGAGCTGAAGAAACTGCAAATCTTCGTTTATGG
ATCTCAATGATCTTCAGACGGACGTGTAAGCTGAGAGAGTGACCTCAGTG
TGACTTGGTCTGGATCTCTGAAGCATCTAAGGTTGAGACTTTATGCGTTT
AAGCAAATGGGTGTTTCATGATGACTCTCCTCGTTGGAGATTATTCAATA
AATGGACTCGCCAGATCCCAAAGCTCCTGGCTTTGTTGATTTAGTCAAAT
CTTGGATCCCTAGAAAGACAGAGTCCTCCACCACCACCACCTCCTCCTCA
CACATGTCTAGAGATTTCTGGATGCCTGACCACAGCTGTCCTGTCTGTTA
CGAGTGTGATGCTCAGTTCACTGTTTTCAACCGAAGACATCACTGCCGCC
TCTGTGGCCGTGTCTTCTGCGCCAAATGCGCTGCCAATTCTATCCCTTCT
CCATCTGATGAAGCCAAGGATAGTCATGAGGAGTCGTCATCAGACAGGAG
GATCAGGGTTTGTAACTACTGCTACAAACAGTGGGAGCAAGGGATAGTTC
CGCCTGATAAAGGAGCTTCTATTATTAGCCTCCATTTTAGCTCTTCCCCT
TCTGCTAGTACCACCTCAAATTGCACCTCCAACAGTAGCAACTGCACCGT
TGATTCAAAAACGAATCCTCCAGCTAGCGGTCGTGTCTCTTCAAACATGG
ATTTGCAGAATGCATCATCATCGTCGCATAGGAATCATTCCTCTCAGGAT
CCAGTTGAATTCTTTGTGAACAGGAGTGATGGTGAAGCTTATGACGATGA
AGATTATAACTCTGATTACGCGCAATCTTACTCTCAAGGAAATGACTACT
ATGGTGCCATTAGTCTTGATGAAGTTGATCGTATCTATGGATCACATGTA
GCTCATGATGCTGGAGAAAACATAGAGTCAAACATCCAAAGTGTCCTGCC
CCCTGACGCACTGAATACAGAGACGATAGATACAGCAATGCAGCAAGCAG
ATGGGTGGAATGATGAGAAGGAGGGAAGCCCTACTTGTGAAGAGGCCTTT
GAGTCTGAAGTAGTAGATTTCGAGAGCGATGGGCTCTTGTGGCTTCCTCC
GGAGCCAGAGAACGAAGAAGATGAAAGAGAAGGATTGTTATCTGATGACG
AAGGTGATGAAGGTGATAGAGGTGATTGGGGGTACCTTCGCCCATCGAAT
AGCTTTAAAGATAAGGAGTTCCACTCGAGGGAGAAGTCTGGTGGCGCTAT
GAAAAACGTTGTTGAAGGGCACTTTAGGGCTTTGGTAGCACAGCTTTTGG
AGGTTGACAATCTACCTATGGTTGACGAAGGCGATAGAGAGGGCTGGCTT
GATATAATCACATCTTTATCATGGGAAGCTGCAACACTTCTCAAGCCGGA
TACGAGTAAAAGCGGAGGAATGGATCCTGGTGGTTATGTGAAGGTTAAAT
GCATCCCCTGTGGACGTCGCAGTGAGAGTATGGTGGTGAGAGGAGTTGTT
TGCAAGAAAAATGTGGCTCATCGGCGAATGACTTCAAAGATCGAGAAGCC
ACGTCTGCTAATTCTTGGAGGAGCTCTGGAGTATCAACGAATATCTAATC
AGTTGTCTAGTTTTGACACTTTGTTGCAACAGGAAATGGATCATTTGAAG
ATGGCTGTTGCCAAAATTCACTCTCACAATCCCCAAATCCTCTTGGTGGA
GAAGTCTGTCTCGCGGTTTGCGCAGGAGTATCTTCTTGCCAAGGACATAT
CTCTTGTTTTAAATATTAAAAGGCCCCTTCTTGAGCGCATATCCCGCTGT
ACCGGTGCGCAGATTGTCCCTTCTGTTGACCAGCTCACATCACCAAAGCT
GGGTTACTGTGACCTCTTCCATGTGGAAAAGTTTGTCGAGACACATTTTA
ATACTGGTCAAGGTGTGAAGAAACTGGCAAAGACTTTAATGTATTTTGAT
GGTTGCCCCAAGCCTTTGGGCTGCACGATTTTGCTCAAGGGGGCACACGA
AGATGAACTAAAAAGGGTGAAACATGTGATTCAGTATGGAGTTTTTGCAG
CATATCACTTAGCTCTTGAGACATCTTTCTTAGCAGATGAAGGTGCTTCC
CTTCCAGAACTTCCTCTGCAGACCCCAATTACAGTGGCTTTACCTGATAA
ACCATCACCGATTAACAGATCAATATCCACAATACCTGGTTTTGCTGCTT
CAAGTGCTGAAAAGTCTCCAACTACTGAGCTGATGGGTGAGCTACATAAA
GCCAATGGCGACGTTACTGGTAATTTCGCTTCTAGTAAGACTCATTTCCA
AGGGAAATTGGATGGGAACGACAGGACTGAGCCTTCTAAGCAGAACATGG
ATACTGATCCAGAAATGATCACCTCTAAGGACAATGGGTTAGTTCCTACT
CTAAAATCCAGGCAGCTATCATTTCAGGCGGAAGGAGCTTCTATTCAGAA
AGACCAGTGGTCTGTTCTACCCTCTGCCACAGAACAAGTCACTGATGGTG
CTGACACTAATGAAGCCACAATAACAAGAGATCAAAGTTTTAGCAGACAT
GAACAGATGGACTCTTCAAAAGGAGACTTTCTTCCGTCAGCTTCTTCTGA
CCATCAAAGCATATTGGTTTCGGCATCAACGAGATGTGTGTGGAAGGGAT
CTGTGTGTGAACGGGCTCATCTACTCCGTATTAAATATTACGGGAGCTTT
GACAAGCCTTTAGGCCGATTCTTAAGGGATAATCTCTTTGATCAGGATCG
TTCTTGCCCGTCATGTGCGATGCCAGTAGAAGCACACATTCATAGTTATA
TTCACAGGCAAGGTAGTCTTACAATATCTGTTAAGAAACTGCCTGAACTG
CTACCTGGACAACGCGAAGGAAAAATTTGGATGTGGCATCGGTGCCTGAA
ATGTCCTCGGATCAGTGGCTTTCCTCCTGCCACACGAAGAATTGTGATGT
CAGATGCTGCGTGGGGCCTGTCTTTTGGTAAGTTTTTGGAACTGAGCTTC
TCGAACCATGCAGCAGCTAGTCGTGTCGCCAACTGTGGTCACTCCCTTCA
CAGAGACTGTCTCCGTTTCTATGGTTTTGGGAAAATGGTGGCTTGCTTCC
GCTATGCTTCAATCAATATATTTGCAGTTTCTTTGCCACCAGCAAAACTT
GAGTTCAACTGTGAAAACCAGGATTGGCTCCAAAGGGAATCTAAAGAGGT
GATTAATAAAGCGGAGGTCCTTTTCAACGAGGTTCAGGAGGCACTTAGTC
AGATTTCAGCGAAAACAATGGGTAGCATTCCCGAGAAGATAAAGCTTTCT
CTTGAAGAACTTGCAGGACTTCTTGATCAACGTAAAAAGGAATATAAGGA
ATCTTTGCAGCAAATGTTAAGCGTGTCCAAGGAGGGGCAACCTACTGTTG
ATATCCTTCTGATAAACAAACTTCGAAGACTGATACTTTTCGATTCATAT
GCCTGGGATGAATGCCTGACAGGAGCGGCCAGTATGGTGAGAAATAACTA
TTCCGAAGCTCTGAGGACTTCTTCCTCAAAAGTTATGGGCCGTGACTTCT
CCTTAGAAAAGCTTGGTGATGAAAAAGAAAAGTCGATTGCAAGTAGTAAT
GACTCTCTTCCCCAAGATGCGGAGTATGATAAAAGTCTTAAAAAGGGTAA
ATCATTTTCTGATATTAGCGGGAAAGGTGTCATTCCTGAAGATGTAGGCT
CAGACAAACCCTCTGAATCTAGTGAAGGTGGTAAAGAAAACGTTGTGGAG
CCTTCGCAGATGGTTAAAGCGATGCTTTCTGAGAGCCAGACCCAAGCAAC
AACAACAGACTTATCTGATACTCTTGATGCAGCATGGATAGGTGAGCAAA
CTGCCTCGGAGAATAATGGTATTTCTCGTCCCCCTAGCAGAGCTGCTTCA
GCAAATGGAACTCAGAGTTATGATTTAAAGCTGTCAGATTCAGAAAGTGG
GCTGACCAGTGAGGAACAGACATTGCAAGTTCAGATGCCTTCTCCTAGTT
TTTACTATTCACTCAACAAGAACTATTCGCTTAATTCTCGCAAGCATATC
ATGGCTGAAGACCGGCCTGTTTATGTTTCGTCATATAGAGAGCTTGAATG
GCAAAGCGGTGCAAGGCTGCTACTTCCTCTGGGAATCAATGACTTGGTAC
TACCAGTATACGATGACGAGCCTACTAGTATCATAGCGTACGCCCTTACA
TCATCAGAGTATAACGCTCAGATGTCTGGATCAGATAAGGCAAGAGATCG
GTTGGATAGTGGAGGCTCCTTTTCGCTTTTTGATTCTGTGAACCTTCTCT
CGTTGAACTCTTTGAGCGATTTGTCAGTTGACATGAGTAGAAGCCTAAGC
TCTGCTGATGAACAAGTCTCGCAGCTGCTGCAGTCATCTTTGTATTTGAA
AGATCTGCACGCTAGAGTCTCGTTTACAGATGAGAGTCCTCCTGGGAAAG
TGAAGTACTCTGTGACGTGTTACTATGCCAAGGAGTTTGAGGCTCTGAGG
AAGATTTGCTGTCCCTCGGAAACTGATTTCATCAGATCTCTTGGTCGGTG
TAGAAAATGGGGAGCTCAGGGTGGGAAGAGCAATGTCTTCTTTGCAAAGA
CTTTGGATGACCGTTTTATCATCAAACAAGTTACAAAGACTGAGCTTGAG
TCCTTCATCAAATTTGCGCCAGCTTACTTCAAATACCTGACTGATTCAAT
CTGTACTAAAAGCCCCACAAGCCTTGCAAAGATCTTGGGAATCTATCAGG
TCTCATCCAAACACCTTAAAGGAGGGAAAGAGTTCAAAATGGATGTCTTG
GTGATGGAGAATCTTCTGTTCAAGCGTAACTTCGCTAGGCTTTATGACCT
AAAAGGCTCCACTCGTGCCCGTTACAATCCGGATACAAGTGGTAGCAACA
CAGTTTTGCTGGACCAGAATCTGGTCGAAGCAATGCCCACATCTCCAATA
TTTGTTGGGAGCAAGGCAAAACGGCTTCTTGAAAGAGCCGTCTGGAATGA
TACATCGTTTCTTGCTTCAATACACGTAATGGATTACTCATTACTAGTCG
GGGTAGATGAGGAACGAAGTGAGCTTGTTCTAGGAACTATAGACTTCATG
AGGCAGTACACTTGGGACAAACATTTGGAGACTTGGGTCAAAACCTCAGG
GCTGCTTGGAGGACCAAAGAACTCAACTCCCACAGTGATATCACCGCAGC
AATACAAGAAACGTTTCAGGAAAGCCATGACAGCTTATTTTCTGATGGTT
CCTGACCAATGGTCACCTGCCACGGTTGTGCCAAGCAACAACAGTTCTTC
AGCAGATGTGAAGGATGATGAAGAGAGAGACGATCGTCAAGGTGTTGGTA
AAAACTCTTGAAATCATCTTTCTGCAATTAGCAAATATAGCAAAGACATA
CACAATATTGGGTTTAGTAATGGTGCTCAAGTTTTATTTGTTTTTTTCTT
CTTTTGGAATGGTCTTTGGGTAATACCTGTTTATGTTTTTACCCTTAGCC
TTAAGTGGCCTTATATGTAGTAGCTCTTTCATCGCCTTTGCATCAGAATT
AATAAAAGCAAGGTGCAATTGTAT
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protein sequence of BraA01g004840.3.5C.9

>BraA01g004840.3.5C.9-P1 ID=BraA01g004840.3.5C.9-P1|Name=BraA01g004840.3.5C.9|organism=Brassica rapa chifu|type=polypeptide|length=1720bp
MDSPDPKAPGFVDLVKSWIPRKTESSTTTTSSSHMSRDFWMPDHSCPVCY
ECDAQFTVFNRRHHCRLCGRVFCAKCAANSIPSPSDEAKDSHEESSSDRR
IRVCNYCYKQWEQGIVPPDKGASIISLHFSSSPSASTTSNCTSNSSNCTV
DSKTNPPASGRVSSNMDLQNASSSSHRNHSSQDPVEFFVNRSDGEAYDDE
DYNSDYAQSYSQGNDYYGAISLDEVDRIYGSHVAHDAGENIESNIQSVLP
PDALNTETIDTAMQQADGWNDEKEGSPTCEEAFESEVVDFESDGLLWLPP
EPENEEDEREGLLSDDEGDEGDRGDWGYLRPSNSFKDKEFHSREKSGGAM
KNVVEGHFRALVAQLLEVDNLPMVDEGDREGWLDIITSLSWEAATLLKPD
TSKSGGMDPGGYVKVKCIPCGRRSESMVVRGVVCKKNVAHRRMTSKIEKP
RLLILGGALEYQRISNQLSSFDTLLQQEMDHLKMAVAKIHSHNPQILLVE
KSVSRFAQEYLLAKDISLVLNIKRPLLERISRCTGAQIVPSVDQLTSPKL
GYCDLFHVEKFVETHFNTGQGVKKLAKTLMYFDGCPKPLGCTILLKGAHE
DELKRVKHVIQYGVFAAYHLALETSFLADEGASLPELPLQTPITVALPDK
PSPINRSISTIPGFAASSAEKSPTTELMGELHKANGDVTGNFASSKTHFQ
GKLDGNDRTEPSKQNMDTDPEMITSKDNGLVPTLKSRQLSFQAEGASIQK
DQWSVLPSATEQVTDGADTNEATITRDQSFSRHEQMDSSKGDFLPSASSD
HQSILVSASTRCVWKGSVCERAHLLRIKYYGSFDKPLGRFLRDNLFDQDR
SCPSCAMPVEAHIHSYIHRQGSLTISVKKLPELLPGQREGKIWMWHRCLK
CPRISGFPPATRRIVMSDAAWGLSFGKFLELSFSNHAAASRVANCGHSLH
RDCLRFYGFGKMVACFRYASINIFAVSLPPAKLEFNCENQDWLQRESKEV
INKAEVLFNEVQEALSQISAKTMGSIPEKIKLSLEELAGLLDQRKKEYKE
SLQQMLSVSKEGQPTVDILLINKLRRLILFDSYAWDECLTGAASMVRNNY
SEALRTSSSKVMGRDFSLEKLGDEKEKSIASSNDSLPQDAEYDKSLKKGK
SFSDISGKGVIPEDVGSDKPSESSEGGKENVVEPSQMVKAMLSESQTQAT
TTDLSDTLDAAWIGEQTASENNGISRPPSRAASANGTQSYDLKLSDSESG
LTSEEQTLQVQMPSPSFYYSLNKNYSLNSRKHIMAEDRPVYVSSYRELEW
QSGARLLLPLGINDLVLPVYDDEPTSIIAYALTSSEYNAQMSGSDKARDR
LDSGGSFSLFDSVNLLSLNSLSDLSVDMSRSLSSADEQVSQLLQSSLYLK
DLHARVSFTDESPPGKVKYSVTCYYAKEFEALRKICCPSETDFIRSLGRC
RKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFAPAYFKYLTDSI
CTKSPTSLAKILGIYQVSSKHLKGGKEFKMDVLVMENLLFKRNFARLYDL
KGSTRARYNPDTSGSNTVLLDQNLVEAMPTSPIFVGSKAKRLLERAVWND
TSFLASIHVMDYSLLVGVDEERSELVLGTIDFMRQYTWDKHLETWVKTSG
LLGGPKNSTPTVISPQQYKKRFRKAMTAYFLMVPDQWSPATVVPSNNSSS
ADVKDDEERDDRQGVGKNS.
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mRNA from alignment at A01:2271075..2278580+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>BraA01g004840.3.5C.9 ID=BraA01g004840.3.5C.9|Name=BraA01g004840.3.5C.9|organism=Brassica rapa chifu|type=mRNA|length=7506bp|location=Sequence derived from alignment at A01:2271075..2278580+ (Brassica rapa chifu)
GGGAAAAGGAAAGGAAAGGAGCTGAAGAAACTGCAAATCTTCGTTTATGT AAACCATTCTATTTCTTCTTCTTTTTTATTCTCTATTTCAATCAATTTGA AAATTTTTGCATTTTTTTTTTGTTTCCCTTCTGCTCTTCGAATCTCTCAT TTTGGTTTCCTAAGAAAAATCGAAGAAAGGGTTTCCCTTTAATGGTTAAT GTTTCCTCGAATTGATTTCAAATCTTATCATGTATTTGTTTTTTAATCAA CCGTCTTTTTGGAATTTCTTATTTGTTTCTTCTTTTGGTCTGGTTCGCTT TTCGTATTAAAAAAATTAGTTGCTTGTTCCTGTAGTTTAGTGTTGCTTGT TTCAAGGGGGTTTTAATCAATTCGCATTTTTGTTGATTCTTGAATCACAC AGGAGAAATTTTGAGTGTTGAGAAACTGAAATCGATACCACTGATATATT AGGGATCTCAATGATCTTCAGACGGACGTGTAAGCTGAGAGAGTGACCTC AGTGTGACTTGGTCTGGATCTCTGAAGCATCTAAGGTAAATTCATTACCC TCTCTCGCTCTCTCTCATCTTCCTTTTTTTCAGACAAGCTTGGCTTAAAG TTTCCTCTTTTAGGAACTCAAAAGGTTGAGACTTTATGCGTTTAAGCAAA TGGGTGTTTCATGATGACTCTCCTCGTTGGAGATTATTCAATAAATGGAC TCGCCAGATCCCAAAGCTCCTGGCTTTGTTGATTTAGTCAAATCTTGGAT CCCTAGAAAGACAGAGTCCTCCACCACCACCACCTCCTCCTCACACATGT CTAGAGATTTCTGGATGCCTGACCACAGCTGTCCTGTCTGTTACGAGTGT GATGCTCAGTTCACTGTTTTCAACCGAAGACATCACTGCCGCCTCTGTGG CCGTGTCTTCTGCGCCAAATGCGCTGCCAATTCTATCCCTTCTCCATCTG ATGAAGCCAAGGATAGTCATGAGGAGTCGTCATCAGACAGGAGGATCAGG GTTTGTAACTACTGCTACAAACAGTGGGAGCAAGGGATAGTTCCGCCTGA TAAAGGAGCTTCTATTATTAGCCTCCATTTTAGCTCTTCCCCTTCTGCTA GTACCACCTCAAATTGCACCTCCAACAGTAGCAACTGCACCGTTGATTCA AAAACGAATCCTCCAGCTAGCGGTCGTGTCTCTTCAAACATGGATTTGCA GAATGCATCATCATCGTCGCATAGGAATCATTCCTCTCAGGATCCAGTTG AATTCTTTGTGAACAGGTTAGCTTTTCTTGTGTTATGTGTGTTTATGTTT TACCTTTGTAGCTTCTGTTATGAATGTATCTGTAGTGGCAGGAGTGATGG TGAAGCTTATGACGATGAAGATTATAACTCTGATTACGCGCAATCTTACT CTCAAGGAAATGACTACTATGGTGCCATTAGTCTTGATGAAGTTGATCGT ATCTATGGATCACATGTAGCTCATGATGCTGGAGAAAACATAGAGTCAAA CATCCAAAGTGTCCTGCCCCCTGACGCACTGAATACAGAGACGATAGATA CAGCAATGCAGCAAGCAGATGGGTGGAATGATGAGAAGGAGGGAAGCCCT ACTTGTGAAGAGGCCTTTGAGTCTGAAGTAGTAGATTTCGAGAGCGATGG GCTCTTGTGGCTTCCTCCGGAGCCAGAGAACGAAGAAGATGAAAGAGAAG GATTGTTATCTGATGACGAAGGTGATGAAGGTGATAGAGGTGATTGGGGG TACCTTCGCCCATCGAATAGCTTTAAAGATAAGGAGTTCCACTCGAGGGA GAAGTCTGGTGGCGCTATGAAAAACGTTGTTGAAGGGCACTTTAGGGCTT TGGTAGCACAGCTTTTGGAGGTTGACAATCTACCTATGGTTGACGAAGGC GATAGAGAGGGCTGGCTTGATATAATCACATCTTTATCATGGGAAGCTGC AACACTTCTCAAGCCGGATACGAGTAAAAGCGGAGGAATGGATCCTGGTG GTTATGTGAAGGTTAAATGCATCCCCTGTGGACGTCGCAGTGAGAGGTGA GTTCTTTAGGACTCCTTAATTGGGATTTATATCTGTTTAGGTTGACTGCT AAGCACTATAGTACTAATTACATTACAATTTTATTATTTTAGTATGGTGG TGAGAGGAGTTGTTTGCAAGAAAAATGTGGCTCATCGGCGAATGACTTCA AAGATCGAGAAGCCACGTCTGCTAATTCTTGGAGGAGCTCTGGAGTATCA ACGAATATCTAATCAGTTGTCTAGTTTTGACACTTTGTTGCAACAGGTAT GTATCGGTTTTCTTCTTTTAGATTTTGCCCTACGACCATGGACATGTATC CTTGTACTAGAAGAAAAGGAAAATCATAACTGTCACTAATGACTATCTCT GGTGTTTCAGGAAATGGATCATTTGAAGATGGCTGTTGCCAAAATTCACT CTCACAATCCCCAAATCCTCTTGGTGGAGAAGTCTGTCTCGCGGTTTGCG CAGGAGTATCTTCTTGCCAAGGACATATCTCTTGTTTTAAATATTAAAAG GCCCCTTCTTGAGCGCATATCCCGCTGTACCGGTGCGCAGATTGTCCCTT CTGTTGACCAGCTCACATCACCAAAGCTGGGTTACTGTGACCTCTTCCAT GTGGAAAAGTTTGTCGAGACACATTTTAATACTGGTCAAGGTGTGAAGAA ACTGGCAAAGACTTTAATGTATTTTGATGGTTGCCCCAAGCCTTTGGGCT GCACGGTAAGTTCCACAATATTCTTAGGTGTTTCAGATATAAGATCCTTA ACATATTAATATTATTGGCTGATTGATCTGTTTTTGTTTTTTTTTCAGAT TTTGCTCAAGGGGGCACACGAAGATGAACTAAAAAGGGTGAAACATGTGA TTCAGTATGGAGTTTTTGCAGCATATCACTTAGCTCTTGAGACATCTTTC TTAGCAGATGAAGGTGCTTCCCTTCCAGAACTTCCTCTGCAGACCCCAAT TACAGTGGCTTTACCTGATAAACCATCACCGATTAACAGATCAATATCCA CAATACCTGGTTTTGCTGCTTCAAGTGCTGAAAAGTCTCCAACTACTGAG CTGATGGGTGAGCTACATAAAGCCAATGGCGACGTTACTGGTAATTTCGC TTCTAGTAAGACTCATTTCCAAGGGAAATTGGATGGGAACGACAGGACTG AGCCTTCTAAGCAGAACATGGATACTGATCCAGAAATGATCACCTCTAAG GACAATGGGTTAGTTCCTACTCTAAAATCCAGGCAGCTATCATTTCAGGC GGAAGGAGCTTCTATTCAGAAAGACCAGTGGTCTGTTCTACCCTCTGCCA CAGAACAAGTCACTGATGGTGCTGACACTAATGAAGCCACAATAACAAGA GATCAAAGTTTTAGCAGACATGAACAGATGGACTCTTCAAAAGGAGACTT TCTTCCGTCAGCTTCTTCTGACCATCAAAGCATATTGGTTTCGGCATCAA CGAGATGTGTGTGGAAGGGATCTGTGTGTGAACGGGCTCATCTACTCCGT ATTAAATATTACGGGAGCTTTGACAAGCCTTTAGGCCGATTCTTAAGGGA TAATCTCTTTGATCAGGTACCTTTCATTTTTAATATGTTTTTTATCTTCT CTTATATCTTAGCACACCTTTATTCTTTTAGCCGATGGTGAGGACATTGT ACTCCTAATGAAACCAAGTGGAATCTAATTAAAGTCCTATGGTTGCGTAC TTGTATAATTGTAGAACTAATTTAAAAGATTCAGGTAAGTTTAGGAGATG ACTGTAGGGATAATCTTTAAAATGACATTAAAAATGGTTTAAAGATTCCA GGCTGATTAAATGAGTAAGAGCAGAAGTTATGAAGCATATCATTTTTTGG TATAGACGTATGGTTTTAAATAGCTGAGGCTTGCATTATTCTCTTGTTTA GGATCGTTCTTGCCCGTCATGTGCGATGCCAGTAGAAGCACACATTCATA GTTATATTCACAGGCAAGGTAGTCTTACAATATCTGTTAAGAAACTGCCT GAACTGCTACCTGGACAACGCGAAGGAAAAATTTGGATGTGGCATCGGTG CCTGAAATGTCCTCGGATCAGTGGCTTTCCTCCTGCCACACGAAGAATTG TGATGTCAGATGCTGCGTGGGGCCTGTCTTTTGGTAAGTTTTTGGAACTG AGCTTCTCGAACCATGCAGCAGCTAGTCGTGTCGCCAACTGTGGTCACTC CCTTCACAGAGACTGTCTCCGTTTCTATGGGTATGAAGAGATTTACTTCC TAATAAACACTTTCACAGTGGAATGTTTAAAGTTTAAACCATTCCATATA TTTTTGATTGTCTCATATAATCTTTCCTTACTGCAGTTTTGGGAAAATGG TGGCTTGCTTCCGCTATGCTTCAATCAATATATTTGCAGTTTCTTTGCCA CCAGCAAAACTTGAGTTCAACTGTGAAAACCAGGATTGGCTCCAAAGGGA ATCTAAAGAGGTTACAACAGTTTTTAATTGAATATTTGTATAATAATCAA CAAACCCAGGAGAGTCTTGTTTTACTTATTTGTTGTGGTTTTCTATACAA TAGGTGATTAATAAAGCGGAGGTCCTTTTCAACGAGGTTCAGGAGGCACT TAGTCAGATTTCAGCGAAAACAATGGGTAGCATTCCCGAGAAGATAAAGC TTTCTCTTGAAGAACTTGCAGGACTTCTTGATCAACGTAAAAAGGAATAT AAGGTACCTTGTCATGCAACTTACACTTCGTTAGACTTAAGAAGTAACAG AGTTGCATTATGCGTGGCGCATTCACATCACTCACACTGACACACTCCTC ACAATATATTTGTTTATATAATGAAAGTTAATTATCAGCACGTGAATAAA TAAACATATTTTTTTACATTTGGAAAAAACATTCTGCATTTGTATACTAT ACACTTTCTCATGTAGTGGACTGTTTCTTGATTGTACATGCCATGTGGTT GTGCTCAAAAAAAGGATCTGAAACTTATTTTCTGAGCAATTGTAGATTTT GTCACCTGATTTTAGCTGTTGGTGGTTTCAGGAATCTTTGCAGCAAATGT TAAGCGTGTCCAAGGAGGGGCAACCTACTGTTGATATCCTTCTGATAAAC AAACTTCGAAGACTGATACTTTTCGATTCATATGCCTGGGATGAATGCCT GACAGGAGCGGCCAGTATGGTGAGAAATAACTATTCCGAAGCTCTGAGGA CTTCTTCCTCAAAAGTTATGGGCCGTGACTTCTCCTTAGAAAAGCTTGGT GATGAAAAAGAAAAGTCGATTGCAAGTAGTAATGACTCTCTTCCCCAAGA TGCGGAGTATGATAAAAGTCTTAAAAAGGGTAAATCATTTTCTGATATTA GCGGGAAAGGTGTCATTCCTGAAGATGTAGGCTCAGACAAACCCTCTGAA TCTAGTGAAGGTGGTAAAGAAAACGTTGTGGAGCCTTCGCAGATGGTTAA AGCGATGCTTTCTGAGAGCCAGACCCAAGCAACAACAACAGACTTATCTG ATACTCTTGATGCAGCATGGATAGGTGAGCAAACTGCCTCGGAGAATAAT GGTATTTCTCGTCCCCCTAGCAGAGCTGCTTCAGCAAATGGAACTCAGAG TTATGATTTAAAGCTGTCAGATTCAGAAAGTGGGCTGACCAGTGAGGAAC AGACATTGCAAGTTCAGATGCCTTCTCCTAGTTTTTACTATTCACTCAAC AAGAACTATTCGCTTAATTCTCGCAAGCATATCATGGCTGAAGACCGGCC TGTTTATGTTTCGTCATATAGAGAGCTTGAATGGCAAAGCGGTGCAAGGC TGCTACTTCCTCTGGGAATCAATGACTTGGTACTACCAGTATACGATGAC GAGCCTACTAGTATCATAGCGTACGCCCTTACATCATCAGAGTATAACGC TCAGATGTCTGGATCAGATAAGGCAAGAGATCGGTTGGATAGTGGAGGCT CCTTTTCGCTTTTTGATTCTGTGAACCTTCTCTCGTTGAACTCTTTGAGC GATTTGTCAGTTGACATGAGTAGAAGCCTAAGCTCTGCTGATGAACAAGT CTCGCAGCTGCTGCAGTCATCTTTGTATTTGAAAGATCTGCACGCTAGAG TCTCGTTTACAGATGAGAGTCCTCCTGGGAAAGTGAAGTACTCTGTGACG TGTTACTATGCCAAGGAGTTTGAGGCTCTGAGGAAGATTTGCTGTCCCTC GGAAACTGATTTCATCAGATCTCTTGGTCGGTGTAGAAAATGGGGAGCTC AGGGTGGGAAGAGCAATGTCTTCTTTGCAAAGACTTTGGATGACCGTTTT ATCATCAAACAAGTTACAAAGACTGAGCTTGAGTCCTTCATCAAATTTGC GCCAGCTTACTTCAAATACCTGACTGATTCAATCTGTACTAAAAGCCCCA CAAGCCTTGCAAAGATCTTGGGAATCTATCAGGTAACACAACATAAACCG ATTTATTTTATTACCTATTTTGTTGACATATAATAATTGAACCAATGATT CTTTGCTAAAATCTGTAAAGGTCTCATCCAAACACCTTAAAGGAGGGAAA GAGTTCAAAATGGATGTCTTGGTGATGGAGAATCTTCTGTTCAAGCGTAA CTTCGCTAGGCTTTATGACCTAAAAGGCTCCACTCGTGCCCGTTACAATC CGGATACAAGTGGTAGCAACACAGTTTTGCTGGACCAGAATCTGGTCGAA GCAATGCCCACATCTCCAATATTTGTTGGGAGCAAGGCAAAACGGCTTCT TGAAAGAGCCGTCTGGAATGATACATCGTTTCTTGCTGTAAGTTTTCCGG TTACTTCTCTTCTTTAAACTGTTTTGAATTGCTGAATATGTTCTTGGGCT GTACATGTTACTGATGGAAGATGTGTTACTTTGTTTCTTTGGCTGAAGTC AATACACGTAATGGATTACTCATTACTAGTCGGGGTAGATGAGGAACGAA GTGAGCTTGTTCTAGGAACTATAGACTTCATGAGGCAGTACACTTGGGAC AAACATTTGGAGACTTGGGTCAAAACCTCAGGGCTGCTTGGAGGACCAAA GAACTCAACTCCCACAGTGATATCACCGCAGCAATACAAGAAACGTTTCA GGAAAGCCATGACAGCTTATTTTCTGATGGTTCCTGACCAATGGTCACCT GCCACGGTTGTGCCAAGCAACAACAGTTCTTCAGCAGATGTGAAGGATGA TGAAGAGAGAGACGATCGTCAAGGTGTTGGTAAAAACTCTTGAAATCATC TTTCTGCAATTAGCAAATATAGCAAAGACATACACAATATTGGGTTTAGT AATGGTGCTCAAGTTTTATTTGTTTTTTTCTTCTTTTGGAATGGTCTTTG GGTAATACCTGTTTATGTTTTTACCCTTAGCCTTAAGTGGCCTTATATGT AGTAGCTCTTTCATCGCCTTTGCATCAGAATTAATAAAAGCAAGGTGCAA TTGTAT
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Coding sequence (CDS) from alignment at A01:2271075..2278580+

>BraA01g004840.3.5C.9 ID=BraA01g004840.3.5C.9|Name=BraA01g004840.3.5C.9|organism=Brassica rapa chifu|type=CDS|length=5160bp|location=Sequence derived from alignment at A01:2271075..2278580+ (Brassica rapa chifu)
ATGGACTCGCCAGATCCCAAAGCTCCTGGCTTTGTTGATTTAGTCAAATC
TTGGATCCCTAGAAAGACAGAGTCCTCCACCACCACCACCTCCTCCTCAC
ACATGTCTAGAGATTTCTGGATGCCTGACCACAGCTGTCCTGTCTGTTAC
GAGTGTGATGCTCAGTTCACTGTTTTCAACCGAAGACATCACTGCCGCCT
CTGTGGCCGTGTCTTCTGCGCCAAATGCGCTGCCAATTCTATCCCTTCTC
CATCTGATGAAGCCAAGGATAGTCATGAGGAGTCGTCATCAGACAGGAGG
ATCAGGGTTTGTAACTACTGCTACAAACAGTGGGAGCAAGGGATAGTTCC
GCCTGATAAAGGAGCTTCTATTATTAGCCTCCATTTTAGCTCTTCCCCTT
CTGCTAGTACCACCTCAAATTGCACCTCCAACAGTAGCAACTGCACCGTT
GATTCAAAAACGAATCCTCCAGCTAGCGGTCGTGTCTCTTCAAACATGGA
TTTGCAGAATGCATCATCATCGTCGCATAGGAATCATTCCTCTCAGGATC
CAGTTGAATTCTTTGTGAACAGGAGTGATGGTGAAGCTTATGACGATGAA
GATTATAACTCTGATTACGCGCAATCTTACTCTCAAGGAAATGACTACTA
TGGTGCCATTAGTCTTGATGAAGTTGATCGTATCTATGGATCACATGTAG
CTCATGATGCTGGAGAAAACATAGAGTCAAACATCCAAAGTGTCCTGCCC
CCTGACGCACTGAATACAGAGACGATAGATACAGCAATGCAGCAAGCAGA
TGGGTGGAATGATGAGAAGGAGGGAAGCCCTACTTGTGAAGAGGCCTTTG
AGTCTGAAGTAGTAGATTTCGAGAGCGATGGGCTCTTGTGGCTTCCTCCG
GAGCCAGAGAACGAAGAAGATGAAAGAGAAGGATTGTTATCTGATGACGA
AGGTGATGAAGGTGATAGAGGTGATTGGGGGTACCTTCGCCCATCGAATA
GCTTTAAAGATAAGGAGTTCCACTCGAGGGAGAAGTCTGGTGGCGCTATG
AAAAACGTTGTTGAAGGGCACTTTAGGGCTTTGGTAGCACAGCTTTTGGA
GGTTGACAATCTACCTATGGTTGACGAAGGCGATAGAGAGGGCTGGCTTG
ATATAATCACATCTTTATCATGGGAAGCTGCAACACTTCTCAAGCCGGAT
ACGAGTAAAAGCGGAGGAATGGATCCTGGTGGTTATGTGAAGGTTAAATG
CATCCCCTGTGGACGTCGCAGTGAGAGTATGGTGGTGAGAGGAGTTGTTT
GCAAGAAAAATGTGGCTCATCGGCGAATGACTTCAAAGATCGAGAAGCCA
CGTCTGCTAATTCTTGGAGGAGCTCTGGAGTATCAACGAATATCTAATCA
GTTGTCTAGTTTTGACACTTTGTTGCAACAGGAAATGGATCATTTGAAGA
TGGCTGTTGCCAAAATTCACTCTCACAATCCCCAAATCCTCTTGGTGGAG
AAGTCTGTCTCGCGGTTTGCGCAGGAGTATCTTCTTGCCAAGGACATATC
TCTTGTTTTAAATATTAAAAGGCCCCTTCTTGAGCGCATATCCCGCTGTA
CCGGTGCGCAGATTGTCCCTTCTGTTGACCAGCTCACATCACCAAAGCTG
GGTTACTGTGACCTCTTCCATGTGGAAAAGTTTGTCGAGACACATTTTAA
TACTGGTCAAGGTGTGAAGAAACTGGCAAAGACTTTAATGTATTTTGATG
GTTGCCCCAAGCCTTTGGGCTGCACGATTTTGCTCAAGGGGGCACACGAA
GATGAACTAAAAAGGGTGAAACATGTGATTCAGTATGGAGTTTTTGCAGC
ATATCACTTAGCTCTTGAGACATCTTTCTTAGCAGATGAAGGTGCTTCCC
TTCCAGAACTTCCTCTGCAGACCCCAATTACAGTGGCTTTACCTGATAAA
CCATCACCGATTAACAGATCAATATCCACAATACCTGGTTTTGCTGCTTC
AAGTGCTGAAAAGTCTCCAACTACTGAGCTGATGGGTGAGCTACATAAAG
CCAATGGCGACGTTACTGGTAATTTCGCTTCTAGTAAGACTCATTTCCAA
GGGAAATTGGATGGGAACGACAGGACTGAGCCTTCTAAGCAGAACATGGA
TACTGATCCAGAAATGATCACCTCTAAGGACAATGGGTTAGTTCCTACTC
TAAAATCCAGGCAGCTATCATTTCAGGCGGAAGGAGCTTCTATTCAGAAA
GACCAGTGGTCTGTTCTACCCTCTGCCACAGAACAAGTCACTGATGGTGC
TGACACTAATGAAGCCACAATAACAAGAGATCAAAGTTTTAGCAGACATG
AACAGATGGACTCTTCAAAAGGAGACTTTCTTCCGTCAGCTTCTTCTGAC
CATCAAAGCATATTGGTTTCGGCATCAACGAGATGTGTGTGGAAGGGATC
TGTGTGTGAACGGGCTCATCTACTCCGTATTAAATATTACGGGAGCTTTG
ACAAGCCTTTAGGCCGATTCTTAAGGGATAATCTCTTTGATCAGGATCGT
TCTTGCCCGTCATGTGCGATGCCAGTAGAAGCACACATTCATAGTTATAT
TCACAGGCAAGGTAGTCTTACAATATCTGTTAAGAAACTGCCTGAACTGC
TACCTGGACAACGCGAAGGAAAAATTTGGATGTGGCATCGGTGCCTGAAA
TGTCCTCGGATCAGTGGCTTTCCTCCTGCCACACGAAGAATTGTGATGTC
AGATGCTGCGTGGGGCCTGTCTTTTGGTAAGTTTTTGGAACTGAGCTTCT
CGAACCATGCAGCAGCTAGTCGTGTCGCCAACTGTGGTCACTCCCTTCAC
AGAGACTGTCTCCGTTTCTATGGTTTTGGGAAAATGGTGGCTTGCTTCCG
CTATGCTTCAATCAATATATTTGCAGTTTCTTTGCCACCAGCAAAACTTG
AGTTCAACTGTGAAAACCAGGATTGGCTCCAAAGGGAATCTAAAGAGGTG
ATTAATAAAGCGGAGGTCCTTTTCAACGAGGTTCAGGAGGCACTTAGTCA
GATTTCAGCGAAAACAATGGGTAGCATTCCCGAGAAGATAAAGCTTTCTC
TTGAAGAACTTGCAGGACTTCTTGATCAACGTAAAAAGGAATATAAGGAA
TCTTTGCAGCAAATGTTAAGCGTGTCCAAGGAGGGGCAACCTACTGTTGA
TATCCTTCTGATAAACAAACTTCGAAGACTGATACTTTTCGATTCATATG
CCTGGGATGAATGCCTGACAGGAGCGGCCAGTATGGTGAGAAATAACTAT
TCCGAAGCTCTGAGGACTTCTTCCTCAAAAGTTATGGGCCGTGACTTCTC
CTTAGAAAAGCTTGGTGATGAAAAAGAAAAGTCGATTGCAAGTAGTAATG
ACTCTCTTCCCCAAGATGCGGAGTATGATAAAAGTCTTAAAAAGGGTAAA
TCATTTTCTGATATTAGCGGGAAAGGTGTCATTCCTGAAGATGTAGGCTC
AGACAAACCCTCTGAATCTAGTGAAGGTGGTAAAGAAAACGTTGTGGAGC
CTTCGCAGATGGTTAAAGCGATGCTTTCTGAGAGCCAGACCCAAGCAACA
ACAACAGACTTATCTGATACTCTTGATGCAGCATGGATAGGTGAGCAAAC
TGCCTCGGAGAATAATGGTATTTCTCGTCCCCCTAGCAGAGCTGCTTCAG
CAAATGGAACTCAGAGTTATGATTTAAAGCTGTCAGATTCAGAAAGTGGG
CTGACCAGTGAGGAACAGACATTGCAAGTTCAGATGCCTTCTCCTAGTTT
TTACTATTCACTCAACAAGAACTATTCGCTTAATTCTCGCAAGCATATCA
TGGCTGAAGACCGGCCTGTTTATGTTTCGTCATATAGAGAGCTTGAATGG
CAAAGCGGTGCAAGGCTGCTACTTCCTCTGGGAATCAATGACTTGGTACT
ACCAGTATACGATGACGAGCCTACTAGTATCATAGCGTACGCCCTTACAT
CATCAGAGTATAACGCTCAGATGTCTGGATCAGATAAGGCAAGAGATCGG
TTGGATAGTGGAGGCTCCTTTTCGCTTTTTGATTCTGTGAACCTTCTCTC
GTTGAACTCTTTGAGCGATTTGTCAGTTGACATGAGTAGAAGCCTAAGCT
CTGCTGATGAACAAGTCTCGCAGCTGCTGCAGTCATCTTTGTATTTGAAA
GATCTGCACGCTAGAGTCTCGTTTACAGATGAGAGTCCTCCTGGGAAAGT
GAAGTACTCTGTGACGTGTTACTATGCCAAGGAGTTTGAGGCTCTGAGGA
AGATTTGCTGTCCCTCGGAAACTGATTTCATCAGATCTCTTGGTCGGTGT
AGAAAATGGGGAGCTCAGGGTGGGAAGAGCAATGTCTTCTTTGCAAAGAC
TTTGGATGACCGTTTTATCATCAAACAAGTTACAAAGACTGAGCTTGAGT
CCTTCATCAAATTTGCGCCAGCTTACTTCAAATACCTGACTGATTCAATC
TGTACTAAAAGCCCCACAAGCCTTGCAAAGATCTTGGGAATCTATCAGGT
CTCATCCAAACACCTTAAAGGAGGGAAAGAGTTCAAAATGGATGTCTTGG
TGATGGAGAATCTTCTGTTCAAGCGTAACTTCGCTAGGCTTTATGACCTA
AAAGGCTCCACTCGTGCCCGTTACAATCCGGATACAAGTGGTAGCAACAC
AGTTTTGCTGGACCAGAATCTGGTCGAAGCAATGCCCACATCTCCAATAT
TTGTTGGGAGCAAGGCAAAACGGCTTCTTGAAAGAGCCGTCTGGAATGAT
ACATCGTTTCTTGCTTCAATACACGTAATGGATTACTCATTACTAGTCGG
GGTAGATGAGGAACGAAGTGAGCTTGTTCTAGGAACTATAGACTTCATGA
GGCAGTACACTTGGGACAAACATTTGGAGACTTGGGTCAAAACCTCAGGG
CTGCTTGGAGGACCAAAGAACTCAACTCCCACAGTGATATCACCGCAGCA
ATACAAGAAACGTTTCAGGAAAGCCATGACAGCTTATTTTCTGATGGTTC
CTGACCAATGGTCACCTGCCACGGTTGTGCCAAGCAACAACAGTTCTTCA
GCAGATGTGAAGGATGATGAAGAGAGAGACGATCGTCAAGGTGTTGGTAA
AAACTCTTGA
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