BraAnng002060.3.5C.1-P1 (polypeptide) Brassica rapa chifu
Overview
Homology
BLAST of BraAnng002060.3.5C.1 vs. GenBank_protein
Match: XP_022553391.1 (uncharacterized protein LOC106378064 [Brassica napus]) HSP 1 Score: 476 bits (1226), Expect = 2.630e-154 Identity = 281/458 (61.35%), Postives = 289/458 (63.10%), Query Frame = 0 Query: 1 MMTPSRYGKRNSENLRVYSNLEVTDDFAIAQGNNHCYEHEHESTGRNPTDLHMGYEQEERYEDLRERNQAPDMYGSRRNYATTHNPRQNESEFMHRERTPEPRCRQEQRTAGSSDPLIVLVQGLPDRLDHRTGESSERSPASPPDYLKM-------------------------------------------------------------------------------------------------------------------LRKYSPYGARNEGALIQRFIRGLRADLASRLQVVMFHSLYELAEIAVNVEEGMEKEQAMMKHAEPSRRTEGLGVRRMNNKGQFNRGRGRGRRNDRRFMNGPDVCYTCGGTGHFSSSCPYSQGRKAPDYITXXXXXXXXXXXXXXXXKRQVTLPAPPTRLAIEPAPKRQAVGKQVNALELGKLEPQQPHQGLITG 343 MMTP RYG+RNSEN RVYSNLEVTDD IA+ NNHCYEHEHESTGRNPTD HMGYEQEERY+DLRERNQAPDMYGSR+NYATTHNPR+NESEFMHRERT EPRCRQEQRTAGSSDPLIVLVQGL DRLDHRTGESSER P+SPP+YLKM L KYSPYGARNEGALI+RFIRGLRADLASRLQVV FHSLYELAEIAVNVEEGMEKEQAMMKH EPSRRTEGLGVRRMNNKGQFNRGR RGRRNDRR CPYSQGRKAPDYIT KRQVTLPAPPTRL IEPAPK QAVGKQVNALELGK EPQQPHQG TG Sbjct: 89 MMTPPRYGQRNSENGRVYSNLEVTDDSVIAKENNHCYEHEHESTGRNPTDSHMGYEQEERYDDLRERNQAPDMYGSRQNYATTHNPRRNESEFMHRERTLEPRCRQEQRTAGSSDPLIVLVQGLLDRLDHRTGESSERRPSSPPNYLKMVTLMKKFGIVRYPGGTDPFEASTWLRNLEKNFRAIHCPDNFKKDVAIYYLTKDASDWWDNVEEYYMGREIDWEDFKTEFERKYFPPEAKDRLEIQFLELTQGNRKVREYEAEFTKLSKYSPYGARNEGALIRRFIRGLRADLASRLQVVKFHSLYELAEIAVNVEEGMEKEQAMMKHVEPSRRTEGLGVRRMNNKGQFNRGRSRGRRNDRR--------------------CPYSQGRKAPDYITCLSCGEKGHYANICPHKRQVTLPAPPTRLPIEPAPKCQAVGKQVNALELGKPEPQQPHQGPTTG 526
BLAST of BraAnng002060.3.5C.1 vs. GenBank_protein
Match: XP_013674246.1 (uncharacterized protein LOC106378698 [Brassica napus]) HSP 1 Score: 413 bits (1061), Expect = 4.960e-138 Identity = 251/359 (69.92%), Postives = 257/359 (71.59%), Query Frame = 0 Query: 73 MYGSRRNYATTHNPRQNESEFMHRERTPEPRCRQEQRTAGSSDPLIVLVQGLPDRLDHRTGESSERSPASPPDYLKM-----------------------------------------------------------------------------------------LRKYSPYGARNEGALIQRFIRGLRADLASRLQVVMFHSLYELAEIAVNVEEGMEKEQAMMKHAEPSRRTEGLGVRRMNNKGQFNRGRGRGRRNDRRFMNGPDVCYTCGGTGHFSSSCPYSQGRKAPDYITXXXXXXXXXXXXXXXXKRQVTLPAPPTRLAIEPAPKRQAVGKQVNALELGKLEPQQPHQGLIT 342 MYGSRRNYAT HNPR+NESEF HRERTPEP RQEQRT GSSDPLIVLVQGL DRLDHRTGESSER P+SPPDYLKM LRKYSPYGARNEGALI+RFIRGLRADLASRLQVV FHSLYELAEIAVNVEEGMEKEQAMMKHAEPSRRTEGLGVRRMNNKGQFNRGRGRGRRNDRRF NGPD+CYTCGGTGHFSS+CPYSQ RKAPDYITXXXXXXXXXXXXXXXXKRQVTLPAPPTRLAIEP PKRQAVGKQVNA+ELGK EPQQPHQG IT Sbjct: 1 MYGSRRNYATAHNPRRNESEFRHRERTPEPCYRQEQRTVGSSDPLIVLVQGLLDRLDHRTGESSERRPSSPPDYLKMVTLMKKFGTVRYPGGTYPFEASAWLRNLEKNFRAIHCPDNFKKDVAIYYLTKDASDWWDNTEEYYMRREIDWEDLKKEFEREYEAEFTKLRKYSPYGARNEGALIRRFIRGLRADLASRLQVVKFHSLYELAEIAVNVEEGMEKEQAMMKHAEPSRRTEGLGVRRMNNKGQFNRGRGRGRRNDRRFTNGPDLCYTCGGTGHFSSNCPYSQRRKAPDYITXXXXXXXXXXXXXXXXKRQVTLPAPPTRLAIEPGPKRQAVGKQVNAIELGKPEPQQPHQGPIT 359
BLAST of BraAnng002060.3.5C.1 vs. GenBank_protein
Match: XP_022574332.1 (uncharacterized protein LOC111215226 [Brassica napus]) HSP 1 Score: 411 bits (1057), Expect = 8.100e-134 Identity = 250/427 (58.55%), Postives = 264/427 (61.83%), Query Frame = 0 Query: 2 MTPSRYGKRNSENLRVYSNLEVTDDFAIAQGNNHCYEHEHESTGRNPTDLHMGYEQEERYEDLRERNQAPDMYGSRRNYATTHNPRQNESEFMHRERTPEPRCRQEQRTAGSSDPLIVLVQGLPDRLDHRTGESSERSPASPPDYLKML-------------------------------------------------------------------------------RKYSPYGARNEGALIQRFIRGLRADLASRLQVVMFHSLYELA-------EIAVNVEEGMEKEQAMMKHAEPSRRTEGLGVRRMNNKGQFNRGRGRGRRNDRRFMNGPDVCYTCGGTGHFSSSCPYSQGRKAPDYITXXXXXXXXXXXXXXXXKRQVTLPAPPTRLAIEPAPKRQAVGKQVNALELGKLEPQQPHQGLIT 342 MTP RYG+RNSEN RVYSNLEVTDD AIAQ NNHCYEHEHESTGRNPTD HMGYEQEERYEDLRERNQAPDMYGSRRNYAT HNP +NESEFMHRERTPEP CRQEQRTAGSSDPLIVLVQGL DRLDHRTGESSER P+SP +YLKM+ RKY P A++ L +F+ + + R F L + + EIAVNVEEGMEKEQAMMKHAEPSRRTEGLGVRRMNNKGQFNR RGRGR+NDRR CPYSQGRKAPDYIT RQVTLP PPTRLAIEPAPKRQ VGKQVNALELGK EPQQPHQG IT Sbjct: 1 MTPPRYGQRNSENRRVYSNLEVTDDSAIAQRNNHCYEHEHESTGRNPTDSHMGYEQEERYEDLRERNQAPDMYGSRRNYATAHNPSRNESEFMHRERTPEPHCRQEQRTAGSSDPLIVLVQGLLDRLDHRTGESSERRPSSPSEYLKMVTLMKKFGTVRYPGGTDPFEASTWLRNLEKHFRAIHCPDNFKKDVPTYYLTKDASDWWDNVEEYYMGREIDWEYFKTEFERKYFPPEAKDR--LDIQFLELTKGNRKVREYEAEFTKLRKYSPYGARNEEIAVNVEEGMEKEQAMMKHAEPSRRTEGLGVRRMNNKGQFNRVRGRGRKNDRR--------------------CPYSQGRKAPDYITCFSCGEKGHYANSCPHNRQVTLPTPPTRLAIEPAPKRQEVGKQVNALELGKPEPQQPHQGPIT 405
BLAST of BraAnng002060.3.5C.1 vs. GenBank_protein
Match: KAG5388485.1 (hypothetical protein IGI04_030026 [Brassica rapa subsp. trilocularis]) HSP 1 Score: 356 bits (913), Expect = 1.110e-116 Identity = 209/344 (60.76%), Postives = 228/344 (66.28%), Query Frame = 0 Query: 1 MMTPSRYGKRNSENLRVYSNLEVTDDFAIAQGNNHCYEHEHESTGRNPTDLHMGYEQEERYEDLRERNQAPDMYGSRRNYATTHNPRQNESEFMHRERTPEPRCRQEQRTAGSSDPLIVLVQGLPDRLDHRTGESSERSPASPPDYLKMLRKYSPYGARNEGALIQRFIRGLRADLASRLQVVMFHSLYELAEIAVNVEEGMEKEQAMMK-HAEPSRRTEGLGVRRMNNKGQFNRGRGRGRRNDRRFMNGPDVCYTCGGTGHFSSSCPYSQGRKAPDYITXXXXXXXXXXXXXXXXKRQVTLPAPPTRLAIEPAPKRQAVGKQVNALELGKLEPQQPHQGLITG 343 MMTP RYG+RNSEN RVYSNLEVTDD AIAQGNNHCYEHEHEST RNPTD H+GYEQEERYEDLRERNQAPDMYGSRRNYA THNPR+NESEFMHRERTPE RCRQEQRTAGSSDPLIVLVQGL DRLDHRTGESSER P+SPPDYLKM+ +G R+ G AS +L E A++ + +K+ +++ AE T+GL + CPYSQGRKAPDYIT KRQVTLPAPPTRLAIEPAPKRQAVGKQVNALELGK EPQQPH+G ITG Sbjct: 81 MMTPPRYGQRNSENRRVYSNLEVTDDSAIAQGNNHCYEHEHESTRRNPTDSHIGYEQEERYEDLRERNQAPDMYGSRRNYAITHNPRRNESEFMHRERTPESRCRQEQRTAGSSDPLIVLVQGLLDRLDHRTGESSERRPSSPPDYLKMVTLMKKFGT-------VRYPGGTNPFEAS----TWLRNLEENFR-AIHCPDNFKKDDNLIEGEAEEEGMTDGL---------------------------------------RMAQICPYSQGRKAPDYITCFSCGEKGHYANSCPHKRQVTLPAPPTRLAIEPAPKRQAVGKQVNALELGKHEPQQPHRGPITG 373
BLAST of BraAnng002060.3.5C.1 vs. GenBank_protein
Match: KAG5397541.1 (hypothetical protein IGI04_019355 [Brassica rapa subsp. trilocularis]) HSP 1 Score: 339 bits (870), Expect = 5.100e-111 Identity = 197/343 (57.43%), Postives = 206/343 (60.06%), Query Frame = 0 Query: 1 MMTPSRYGKRNSENLRVYSNLEVTDDFAIAQGNNHCYEHEHESTGRNPTDLHMGYEQEERYEDLRERNQAPDMYGSRRNYATTHNPRQNESEFMHRERTPEPRCRQEQRTAGSSDPLIVLVQGLPDRLDHRTGESSERSPASPPDYLKMLRKYSPYGARNEGALIQRFIRGLRADLASRLQVVMFHSLYELAEIAVNVEEGMEKEQAMMKHAEPSRRTEGLGVRRMNNKGQFNRGRGRGRRNDRRFMNGPDVCYTCGGTGHFSSSCPYSQGRKAPDYITXXXXXXXXXXXXXXXXKRQVTLPAPPTRLAIEPAPKRQAVGKQVNALELGKLEPQQPHQGLITG 343 MMTP RYG+RNSEN RVYSNLEVTDD AIAQGNNHCYEHEHESTGRNPTD HMGYEQEERYEDLRERNQAPDMYGSRRN+ATTHNPRQNESEFMHRERTPEPRCRQEQRTAGSSDPLIVLVQGL DRLDHRTGESSER P+SPPDYLKM RK Y C++CG GH+++SCP+ KRQVTLPAPPTRLAIEPAPKRQAVGKQVNALELGK EPQQPHQG ITG Sbjct: 81 MMTPPRYGQRNSENRRVYSNLEVTDDSAIAQGNNHCYEHEHESTGRNPTDSHMGYEQEERYEDLRERNQAPDMYGSRRNFATTHNPRQNESEFMHRERTPEPRCRQEQRTAGSSDPLIVLVQGLLDRLDHRTGESSERRPSSPPDYLKMGRKAPDY----------------------------------------------------------------------------------------------ITCFSCGEKGHYANSCPH---------------------------KRQVTLPAPPTRLAIEPAPKRQAVGKQVNALELGKPEPQQPHQGPITG 302
BLAST of BraAnng002060.3.5C.1 vs. GenBank_protein
Match: XP_033138935.1 (uncharacterized protein LOC117129803 [Brassica rapa]) HSP 1 Score: 325 bits (832), Expect = 4.220e-107 Identity = 186/194 (95.88%), Postives = 187/194 (96.39%), Query Frame = 0 Query: 150 LRKYSPYGARNEGALIQRFIRGLRADLASRLQVVMFHSLYELAEIAVNVEEGMEKEQAMMKHAEPSRRTEGLGVRRMNNKGQFNRGRGRGRRNDRRFMNGPDVCYTCGGTGHFSSSCPYSQGRKAPDYITXXXXXXXXXXXXXXXXKRQVTLPAPPTRLAIEPAPKRQAVGKQVNALELGKLEPQQPHQGLITG 343 LRKYSPYGARNEGALI+RFIRGLR D ASRLQVV FHSLYELAEIAVNVEEGMEKEQAMMKHAEPSRRTEGLGVRRMNNKGQFNRGRGRGRRNDRRF NGPDVCYTCGGTGHFSSSCPYSQGRKAPDYITXXXXXXXXXXXXXXXXKRQVTLPAPPTRLAIEPAPKRQAVGKQVNALEL K EPQQPHQG ITG Sbjct: 51 LRKYSPYGARNEGALIRRFIRGLRVDFASRLQVVKFHSLYELAEIAVNVEEGMEKEQAMMKHAEPSRRTEGLGVRRMNNKGQFNRGRGRGRRNDRRFTNGPDVCYTCGGTGHFSSSCPYSQGRKAPDYITXXXXXXXXXXXXXXXXKRQVTLPAPPTRLAIEPAPKRQAVGKQVNALELEKPEPQQPHQGPITG 244
BLAST of BraAnng002060.3.5C.1 vs. GenBank_protein
Match: KAG5397573.1 (hypothetical protein IGI04_019387 [Brassica rapa subsp. trilocularis]) HSP 1 Score: 318 bits (816), Expect = 1.330e-104 Identity = 190/341 (55.72%), Postives = 200/341 (58.65%), Query Frame = 0 Query: 2 MTPSRYGKRNSENLRVYSNLEVTDDFAIAQGNNHCYEHEHESTGRNPTDLHMGYEQEERYEDLRERNQAPDMYGSRRNYATTHNPRQNESEFMHRERTPEPRCRQEQRTAGSSDPLIVLVQGLPDRLDHRTGESSERSPASPPDYLKMLRKYSPYGARNEGALIQRFIRGLRADLASRLQVVMFHSLYELAEIAVNVEEGMEKEQAMMKHAEPSRRTEGLGVRRMNNKGQFNRGRGRGRRNDRRFMNGPDVCYTCGGTGHFSSSCPYSQGRKAPDYITXXXXXXXXXXXXXXXXKRQVTLPAPPTRLAIEPAPKRQAVGKQVNALELGKLEPQQPHQGLIT 342 MT RYG+RNSEN RVYSNLEVTDD AIAQGNNHCYEH+ STGRNPTD HMGYEQEERYEDLRERNQAPDMYGSRRN+ATTHNPRQNESEFMHRERTPEPRCRQEQRTAGSSDPLIVLVQGL DRLDHRTGE SER P+SPPDYLKM RK Y C++CG GH+++SCP+ KRQVTLPAPPTRLAIEPAPKRQAVGKQVNALELGK EPQQPHQG IT Sbjct: 1 MTSPRYGQRNSENHRVYSNLEVTDDSAIAQGNNHCYEHK--STGRNPTDSHMGYEQEERYEDLRERNQAPDMYGSRRNFATTHNPRQNESEFMHRERTPEPRCRQEQRTAGSSDPLIVLVQGLLDRLDHRTGELSERRPSSPPDYLKMGRKAPDY----------------------------------------------------------------------------------------------ITCFSCGEKGHYANSCPH---------------------------KRQVTLPAPPTRLAIEPAPKRQAVGKQVNALELGKPEPQQPHQGPIT 218
BLAST of BraAnng002060.3.5C.1 vs. GenBank_protein
Match: KAG5384155.1 (hypothetical protein IGI04_035625 [Brassica rapa subsp. trilocularis]) HSP 1 Score: 312 bits (800), Expect = 2.120e-102 Identity = 191/330 (57.88%), Postives = 204/330 (61.82%), Query Frame = 0 Query: 17 VYSNLEVTDDFAIAQGNNHCYEHEHESTGRNPTDLHMGYEQEERYEDLRERNQAPDMYGSRRNYATTHNPRQNESEFMHRERTPEPRCRQEQRTAGSSDPLIVLVQGLPDRLDHRTGESSERSPASPPDYLKMLRKYSPYGARNEGALIQRFIRGLRADLASRLQVVMFHSLYELAEIAVNVEEGMEKEQAMMKHAEPSRRTEGLGVRRMNNKGQFNRGRGRGRRNDRRFMNGPD--VCYTCGGTGHFSSSCPYSQGRKAPDYITXXXXXXXXXXXXXXXXKRQVTLPAPPTRLAIEPAPKRQAVGKQVNALELGKLEPQQPHQGLITGK 344 VYSNLEVTDD IAQGNNHCYEHEHESTGRNPTD MGYEQEERYEDLRERNQAPDMYGSRRNYATTHNPR+NESEFMHRERTPE RCRQEQRTAGSSDPLIVLVQGL DRLDHRTGESSER P+SPPDYLKM N+ EG +E+ M T+GL + M R PD C++CG GH+++SCP+ KRQVTLPAPPTRLAIEPAPKRQAVGKQVNALELGK EPQQPHQG ITGK Sbjct: 42 VYSNLEVTDDSVIAQGNNHCYEHEHESTGRNPTDSRMGYEQEERYEDLRERNQAPDMYGSRRNYATTHNPRRNESEFMHRERTPESRCRQEQRTAGSSDPLIVLVQGLLDRLDHRTGESSERRPSSPPDYLKMD----------------------------------------------NLIEGEAEEEGM---------TDGLRMAHMCVTLVVGR-------------KAPDYITCFSCGEKGHYANSCPH---------------------------KRQVTLPAPPTRLAIEPAPKRQAVGKQVNALELGKPEPQQPHQGPITGK 276
BLAST of BraAnng002060.3.5C.1 vs. GenBank_protein
Match: KAG2251054.1 (hypothetical protein Bca52824_081190 [Brassica carinata]) HSP 1 Score: 310 bits (793), Expect = 7.630e-101 Identity = 182/279 (65.23%), Postives = 201/279 (72.04%), Query Frame = 0 Query: 1 MMTPSRYGKRNSENLRVYSNLEVTDDFAIAQGNNHCYEHEHESTGRNPTDLHMGYEQEERYEDLRERNQAPDMYGSRRNYATTHNPRQNESEFMHRERTPEPRCRQEQ----RTAGSSDPLIVLVQGLPDRLDHRTGESSERSPASPPDYLKMLRKYSPYGARNEGALIQRFIRGLRADLASRLQVVMFHSLYELAEIAVNVEEGMEKEQAMMKHAEPSRRTEGLGVRRMNNKGQFNRGRGRGRRNDRRFMNGPDVCYTCGGTGHFSSSCPYSQGRKAP 275 MM P RYG+ NSE R YSNLEVTDD AIAQGNNH YEHEHESTGRNPTD MGYEQEE+YED RERNQ PDMYGSRRNYAT HNPR+N+SE R + ++ R G +DP R E + ++ P ++ K + Y Y ++ FIRGLRADLASRLQVV FHSLYELAEIAVNVEEGMEKE AMMKHAEPSRRTEGL + RMNNKGQFNRGRGRGR+ND RF NGP+VCYTCGG HFSSSC YSQGRKAP Sbjct: 12 MMRPPRYGQCNSETRRAYSNLEVTDDSAIAQGNNHYYEHEHESTGRNPTDSQMGYEQEEQYEDFRERNQVPDMYGSRRNYATAHNPRRNDSEPSSRLDYLKMVTLMKKFGTLRYPGGTDPFEASAW-------LRNLEKNFQTIHCPDNFEKDVAIY--YLTKDASDW---FIRGLRADLASRLQVVKFHSLYELAEIAVNVEEGMEKELAMMKHAEPSRRTEGLRILRMNNKGQFNRGRGRGRKNDGRFRNGPNVCYTCGGACHFSSSCLYSQGRKAP 278
BLAST of BraAnng002060.3.5C.1 vs. GenBank_protein
Match: XP_033138738.1 (uncharacterized protein LOC108870803 [Brassica rapa]) HSP 1 Score: 313 bits (801), Expect = 1.010e-100 Identity = 179/194 (92.27%), Postives = 184/194 (94.85%), Query Frame = 0 Query: 150 LRKYSPYGARNEGALIQRFIRGLRADLASRLQVVMFHSLYELAEIAVNVEEGMEKEQAMMKHAEPSRRTEGLGVRRMNNKGQFNRGRGRGRRNDRRFMNGPDVCYTCGGTGHFSSSCPYSQGRKAPDYITXXXXXXXXXXXXXXXXKRQVTLPAPPTRLAIEPAPKRQAVGKQVNALELGKLEPQQPHQGLITG 343 LRKYSPYGARNEG LI+RFIRGLRADLASRLQVV FHSLYELAEIAVNV+EGMEKEQAMMKH+EPSRRTEGLG+RRMNNKGQFNRGR RGRRNDRRF NGP+VCYTCGGT HFSSSCPYSQGRKAPDYITXXXXXXXXXXXXXXXX RQVT PAPPT LAIEPAPKRQAVGKQVNALELGK EPQQPHQG ITG Sbjct: 51 LRKYSPYGARNEGTLIRRFIRGLRADLASRLQVVKFHSLYELAEIAVNVQEGMEKEQAMMKHSEPSRRTEGLGIRRMNNKGQFNRGRSRGRRNDRRFGNGPNVCYTCGGTSHFSSSCPYSQGRKAPDYITXXXXXXXXXXXXXXXXNRQVTFPAPPTILAIEPAPKRQAVGKQVNALELGKPEPQQPHQGPITG 244 The following BLAST results are available for this feature:
BLAST of BraAnng002060.3.5C.1 vs. GenBank_protein
Analysis Date: 2022-02-26 (Diamond on OGS3.5 vs NR) Total hits: 20
Pagesback to topGO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterProScan on OGS3.5
Date Performed: 2022-02-26
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BraAnng002060.3.5C.1-P1 ID=BraAnng002060.3.5C.1-P1|Name=BraAnng002060.3.5C.1|organism=Brassica rapa chifu|type=polypeptide|length=345bpback to top |