BraAnng001220.3.5C.1-P1 (polypeptide) Brassica rapa chifu

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	BraAnng001220.3.5C.1
Unique Name	BraAnng001220.3.5C.1-P1
Type	polypeptide
Organism	Brassica rapa chifu (field mustard)
Sequence length	494

Homology

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BLAST of BraAnng001220.3.5C.1 vs. GenBank_protein
Match: VDC77048.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 957 bits (2473), Expect = 0.000e+0
Identity = 492/524 (93.89%), Postives = 492/524 (93.89%), Query Frame = 0

Query:    1 MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQNAPVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMK-------------------------------PSILSPFLGSQDTAAYTSASIEHSAMSLRINLHASYVSPDISLAFVVATEMTLLVHFGVDELPG 493
            MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQN PVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMK                               PSILSPFLGSQDTAAYTSASIEHSAMSLRINLHASYVSPDISLAFVVATEMTLLVHFGVDELPG
Sbjct:    1 MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQNTPVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMKYAGALANICNMGVDVKQHLHRQGNKTQTFFWPSILSPFLGSQDTAAYTSASIEHSAMSLRINLHASYVSPDISLAFVVATEMTLLVHFGVDELPG 524

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BLAST of BraAnng001220.3.5C.1 vs. GenBank_protein
Match: CDY42232.1 (BnaA01g25630D [Brassica napus])

HSP 1 Score: 933 bits (2411), Expect = 0.000e+0
Identity = 482/525 (91.81%), Postives = 485/525 (92.38%), Query Frame = 0

Query:    1 MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQNAPVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMK--------------------------------PSILSPFLGSQDTAAYTSASIEHSAMSLRINLHASYVSPDISLAFVVATEMTLLVHFGVDELPG 493
            MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSG     GKVVKSGPNDNIFIYYADHGATGF+SMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELL DYLVSYIGTNPENKNFSLA+LTASQISNLSLVNTREIPLLYLQKKIQNAPVGSPERQEAQKNL+DEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQ LVDDWDCFKTLVKSFKNQCGAKMEYGMK                                PSILSPFLGSQDTAAYTSASIE SAMSLRINLHASYVSPDISLAFVVATEMTLLVHFGVDELPG
Sbjct:    1 MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSG----HGKVVKSGPNDNIFIYYADHGATGFMSMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLNDYLVSYIGTNPENKNFSLAALTASQISNLSLVNTREIPLLYLQKKIQNAPVGSPERQEAQKNLIDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQPLVDDWDCFKTLVKSFKNQCGAKMEYGMKYAGALANICNMGVDVKQHLHRQGNKTQTFFWFPSILSPFLGSQDTAAYTSASIERSAMSLRINLHASYVSPDISLAFVVATEMTLLVHFGVDELPG 521

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BLAST of BraAnng001220.3.5C.1 vs. GenBank_protein
Match: CDY12724.1 (BnaC04g29170D [Brassica napus])

HSP 1 Score: 883 bits (2282), Expect = 0.000e+0
Identity = 456/525 (86.86%), Postives = 468/525 (89.14%), Query Frame = 0

Query:    1 MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQNAPVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMK--------------------------------PSILSPFLGSQDTAAYTSASIEHSAMSLRINLHASYVSPDISLAFVVATEMTLLVHFGVDELPG 493
            MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEG RWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGN+SGVTGGSGKVVKSGPNDNIFIYYADHGATGF+SMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTAS+A++SS GIYCG TYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELL DYLVSYIGTNPENKNFSLA+LTASQISNLSLVNTREIPLLYL+KKIQNAPVGSPERQEAQKNL+DEMNHRKQIDQNIIEILR+SLNQ+NVLDLLTSTRTTGQ LVDDWDCFKTLVKSFKNQCGAKMEYGMK                                PSILSPFLGSQDTAAYT                  YV PDISLAFV+AT+MT LVHFGVDELPG
Sbjct:    1 MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGTRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNESGVTGGSGKVVKSGPNDNIFIYYADHGATGFMSMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASSAEESSSGIYCGYTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLNDYLVSYIGTNPENKNFSLAALTASQISNLSLVNTREIPLLYLRKKIQNAPVGSPERQEAQKNLIDEMNHRKQIDQNIIEILRLSLNQSNVLDLLTSTRTTGQPLVDDWDCFKTLVKSFKNQCGAKMEYGMKYAGALANICNMGVDVKQHLHRQGNKTQTFFWFPSILSPFLGSQDTAAYT-----------------RYVCPDISLAFVLATDMTFLVHFGVDELPG 508

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BLAST of BraAnng001220.3.5C.1 vs. GenBank_protein
Match: XP_009111229.1 (vacuolar-processing enzyme delta-isozyme [Brassica rapa] >XP_033138994.1 vacuolar-processing enzyme delta-isozyme-like [Brassica rapa] >XP_033138997.1 vacuolar-processing enzyme delta-isozyme-like [Brassica rapa])

HSP 1 Score: 855 bits (2209), Expect = 2.250e-311
Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 0

Query:    1 MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQNAPVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMK 429
            MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQNAPVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMK
Sbjct:    1 MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQNAPVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMK 429

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BLAST of BraAnng001220.3.5C.1 vs. GenBank_protein
Match: XP_013674960.1 (vacuolar-processing enzyme delta-isozyme-like [Brassica napus])

HSP 1 Score: 853 bits (2205), Expect = 9.140e-311
Identity = 428/429 (99.77%), Postives = 428/429 (99.77%), Query Frame = 0

Query:    1 MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQNAPVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMK 429
            MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQN PVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMK
Sbjct:    1 MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQNTPVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMK 429

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BLAST of BraAnng001220.3.5C.1 vs. GenBank_protein
Match: CAF2153883.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 838 bits (2166), Expect = 6.870e-305
Identity = 423/429 (98.60%), Postives = 423/429 (98.60%), Query Frame = 0

Query:    1 MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQNAPVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMK 429
            MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSG     GKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQN PVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMK
Sbjct:    1 MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSG----HGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQNTPVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMK 425

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BLAST of BraAnng001220.3.5C.1 vs. GenBank_protein
Match: KAF3515123.1 (hypothetical protein F2Q69_00007999 [Brassica cretica])

HSP 1 Score: 834 bits (2155), Expect = 3.790e-303
Identity = 416/429 (96.97%), Postives = 426/429 (99.30%), Query Frame = 0

Query:    1 MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQNAPVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMK 429
            MSFLGHFQIFLFLYALLL+SAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGN+SGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTAS+A++SS+GIYCG TYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYL SYIGTNPENKNFSLA+LTASQISNLSLVNTREIPLLYL+KKIQNAPVGSPERQEAQKNL+DEMNHRKQIDQNIIEILR+SLNQTNVLDLLTSTRTTGQ LVDDWDCFKTLVKSFKNQCGAKMEYGMK
Sbjct:    1 MSFLGHFQIFLFLYALLLISAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNESGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASSAEESSHGIYCGYTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLASYIGTNPENKNFSLAALTASQISNLSLVNTREIPLLYLRKKIQNAPVGSPERQEAQKNLIDEMNHRKQIDQNIIEILRLSLNQTNVLDLLTSTRTTGQPLVDDWDCFKTLVKSFKNQCGAKMEYGMK 429

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BLAST of BraAnng001220.3.5C.1 vs. GenBank_protein
Match: XP_013615280.1 (PREDICTED: vacuolar-processing enzyme delta-isozyme-like [Brassica oleracea var. oleracea] >KAG2246811.1 hypothetical protein Bca52824_086439 [Brassica carinata])

HSP 1 Score: 834 bits (2155), Expect = 3.790e-303
Identity = 416/429 (96.97%), Postives = 426/429 (99.30%), Query Frame = 0

Query:    1 MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQNAPVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMK 429
            MSFLGHFQIFLFLYALLL+SAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLK+ENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGN+SGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTAS+A++SSYGIYCG TYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYL SYIGTNPENKNFSLA+LTASQISNLSLVNTREIPLLYL+KKIQNAPVGSPERQEAQKNL+DEMNHRKQIDQNIIEILR+SLNQTNVLDLLTSTRTTGQ LVDDWDCFKTLVKSFKNQCGAKMEYGMK
Sbjct:    1 MSFLGHFQIFLFLYALLLISAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKNENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNESGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASSAEESSYGIYCGYTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLASYIGTNPENKNFSLAALTASQISNLSLVNTREIPLLYLRKKIQNAPVGSPERQEAQKNLIDEMNHRKQIDQNIIEILRLSLNQTNVLDLLTSTRTTGQPLVDDWDCFKTLVKSFKNQCGAKMEYGMK 429

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BLAST of BraAnng001220.3.5C.1 vs. GenBank_protein
Match: RIA04497.1 (hypothetical protein BRARA_K01264 [Brassica rapa])

HSP 1 Score: 830 bits (2143), Expect = 1.880e-301
Identity = 421/429 (98.14%), Postives = 421/429 (98.14%), Query Frame = 0

Query:    1 MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQNAPVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMK 429
            MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQ        ILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQNAPVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMK
Sbjct:    1 MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQ--------ILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQNAPVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMK 421

[Close]

BLAST of BraAnng001220.3.5C.1 vs. GenBank_protein
Match: VDD51968.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 831 bits (2146), Expect = 2.650e-301
Identity = 415/429 (96.74%), Postives = 424/429 (98.83%), Query Frame = 0

Query:    1 MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQNAPVGSPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQSLVDDWDCFKTLVKSFKNQCGAKMEYGMK 429
            MSFLGHFQIFLFLYALLL+SAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGN+SGVTGGSGKVVKSGPNDNIFIYYADHGATGFISM TGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEG LKTNLNIYAVTAS+A++SSYGIYCG TYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYL SYIGTNPENKNFSLA+LTASQISNLSLVNTREIPLLYL+KKIQNAPVGSPERQEAQKNL+DEMNHRKQIDQNIIEILR+SLNQTNVLDLLTSTRTTGQ LVDDWDCFKTLVKSFKNQCGAKMEYGMK
Sbjct:    1 MSFLGHFQIFLFLYALLLISAQSRKTEHDTESSDDGAEGQRWAVLVAGSKEYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIINRPGGEDVYQGVPKDYTGEAVNVENFLNVILGNESGVTGGSGKVVKSGPNDNIFIYYADHGATGFISMSTGEALYAEDFIKVLERMHLLKRYKKMVIYIEACESGSMFEGRLKTNLNIYAVTASSAEESSYGIYCGYTYPPSPPEYNGLCLGDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDYLASYIGTNPENKNFSLAALTASQISNLSLVNTREIPLLYLRKKIQNAPVGSPERQEAQKNLIDEMNHRKQIDQNIIEILRLSLNQTNVLDLLTSTRTTGQPLVDDWDCFKTLVKSFKNQCGAKMEYGMK 429

The following BLAST results are available for this feature:

BLAST of BraAnng001220.3.5C.1 vs. GenBank_protein

BLAST of BraAnng001220.3.5C.1 vs. GenBank_protein
Analysis Date: 2022-02-26 (Diamond on OGS3.5 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
VDC77048.1	0.000e+0	93.89	unnamed protein product [Brassica rapa]	[more]
CDY42232.1	0.000e+0	91.81	BnaA01g25630D [Brassica napus]	[more]
CDY12724.1	0.000e+0	86.86	BnaC04g29170D [Brassica napus]	[more]
XP_009111229.1	2.250e-311	100.00	vacuolar-processing enzyme delta-isozyme [Brassica...	[more]
XP_013674960.1	9.140e-311	99.77	vacuolar-processing enzyme delta-isozyme-like [Bra...	[more]
CAF2153883.1	6.870e-305	98.60	unnamed protein product [Brassica napus]	[more]
KAF3515123.1	3.790e-303	96.97	hypothetical protein F2Q69_00007999 [Brassica cret...	[more]
XP_013615280.1	3.790e-303	96.97	PREDICTED: vacuolar-processing enzyme delta-isozym...	[more]
RIA04497.1	1.880e-301	98.14	hypothetical protein BRARA_K01264 [Brassica rapa]	[more]
VDD51968.1	2.650e-301	96.74	unnamed protein product [Brassica oleracea]	[more]

Pages

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051603	proteolysis involved in cellular protein catabolic process
biological_process	GO:0006624	vacuolar protein processing
cellular_component	GO:0005773	vacuole
molecular_function	GO:0004197	cysteine-type endopeptidase activity

InterPro

Analysis Name: InterProScan on OGS3.5
Date Performed: 2022-02-26


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001096	Peptidase C13, legumain	PRINTS	PR00776	HEMOGLOBNASE	coord: 114..129 score: 56.79 coord: 42..66 score: 72.0 coord: 67..96 score: 56.81 coord: 191..207 score: 66.75 coord: 142..161 score: 60.87
IPR001096	Peptidase C13, legumain	PIRSF	PIRSF019663	Legumain	coord: 2..455 e-value: 1.2E-189 score: 628.8
IPR001096	Peptidase C13, legumain	PFAM	PF01650	Peptidase_C13	coord: 41..306 e-value: 6.3E-109 score: 363.4
IPR001096	Peptidase C13, legumain	PANTHER	PTHR12000	HEMOGLOBINASE FAMILY MEMBER	coord: 1..429
None	No IPR available	GENE3D	1.10.132.130		coord: 332..432 e-value: 8.3E-20 score: 73.0
None	No IPR available	GENE3D	3.40.50.1460		coord: 39..329 e-value: 2.0E-121 score: 406.8
None	No IPR available	PIRSR	PIRSR019663-1	PIRSR019663-1	coord: 39..429 e-value: 9.1E-181 score: 599.4
None	No IPR available	PANTHER	PTHR12000:SF43	BNACNNG42290D PROTEIN	coord: 1..429
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..8
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 9..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 20..23
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 24..493
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..23 score: 0.804
IPR043577	Asparaginyl endopeptidase	PIRSF	PIRSF500139	AE	coord: 1..438 e-value: 5.4E-186 score: 616.9

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Scaffold0230	contig	Scaffold0230:45712..48187 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS3.5	2022-02-26
Diamond on OGS3.5 vs NR	2022-02-26
Blast2GO on OGS3.5	2022-02-26

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
BraAnng001220.3.5C.1	BraAnng001220.3.5C.1	Brassica rapa chifu	mRNA	Scaffold0230 45712..48187 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>BraAnng001220.3.5C.1-P1 ID=BraAnng001220.3.5C.1-P1|Name=BraAnng001220.3.5C.1|organism=Brassica rapa chifu|type=polypeptide|length=494bp
MSFLGHFQIFLFLYALLLLSAQSRKTEHDTESSDDGAEGQRWAVLVAGSK
EYENYRHQADICHAYQILRKGGLKDENIIVFMFDDIALNPKNPKRGVIIN
RPGGEDVYQGVPKDYTGEAVNVENFLNVILGNKSGVTGGSGKVVKSGPND
NIFIYYADHGATGFISMPTGEALYAEDFIKVLERMHLLKRYKKMVIYIEA
CESGSMFEGLLKTNLNIYAVTASNAKDSSYGIYCGDTYPPSPPEYNGLCL
GDEFSVSWLEDSELHDMRKETLKQQYQVVKRRTRSSHVCRFGSEELLKDY
LVSYIGTNPENKNFSLASLTASQISNLSLVNTREIPLLYLQKKIQNAPVG
SPERQEAQKNLLDEMNHRKQIDQNIIEILRVSLNQTNVLDLLTSTRTTGQ
SLVDDWDCFKTLVKSFKNQCGAKMEYGMKPSILSPFLGSQDTAAYTSASI
EHSAMSLRINLHASYVSPDISLAFVVATEMTLLVHFGVDELPG.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR043577	AE
IPR001096	Peptidase_C13

Vocabulary: **Biological Process**
Term	Definition
GO:0051603	proteolysis involved in cellular protein catabolic process
GO:0006624	vacuolar protein processing

Vocabulary: **Cellular Component**
Term	Definition
GO:0005773	vacuole

Vocabulary: **Molecular Function**
Term	Definition
GO:0004197	cysteine-type endopeptidase activity

Orthology

View orthology data for BraAnng001220.3.5C.1-P1