BraAnng001050.3.5C.1-P1 (polypeptide) Brassica rapa chifu

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	BraAnng001050.3.5C.1
Unique Name	BraAnng001050.3.5C.1-P1
Type	polypeptide
Organism	Brassica rapa chifu (field mustard)
Sequence length	904

Homology

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BLAST of BraAnng001050.3.5C.1 vs. GenBank_protein
Match: XP_033138975.1 (uncharacterized protein LOC117129864 isoform X1 [Brassica rapa] >XP_033138976.1 uncharacterized protein LOC117129864 isoform X1 [Brassica rapa])

HSP 1 Score: 1670 bits (4326), Expect = 0.000e+0
Identity = 862/879 (98.07%), Postives = 864/879 (98.29%), Query Frame = 0

Query:    1 MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGSVFNKADKLKGKAPGQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQLDNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDMAVNGDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNSGRSVEDFFQTIEEVVENDYKSLSNEECFFIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAGGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKETAERLSKSQTAFDSQNHAAMVKEQTEAKYYKAYRRFNSTLKKAFVDSLRTRQELRQRAVEHPLGKAEATEEQTFVKTEDHGFQGAQEDKEEVKEINTISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKEFAGPKEHLGVAAKRGEAKFQVDNFWTRLWGKKELEKLYQM 879
            MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGSVFNKADKLKGKAPGQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQLDNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDMAVNGDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNSGRSVEDFFQTIEEVVENDYKSLSNEECFFIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAGGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKETAERLSKSQTAFDSQNHAAMVKEQTE               KAFVDSLRTRQELRQRAVEHPLGKAEATEEQTFVKTEDHGFQGAQEDKEEVKEINTISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKEFAGPKEHLGVAAKRGEAKFQVDNFWTRLWGKKELEKLY++
Sbjct:    1 MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGSVFNKADKLKGKAPGQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQLDNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDMAVNGDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNSGRSVEDFFQTIEEVVENDYKSLSNEECFFIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAGGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKETAERLSKSQTAFDSQNHAAMVKEQTE---------------KAFVDSLRTRQELRQRAVEHPLGKAEATEEQTFVKTEDHGFQGAQEDKEEVKEINTISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKEFAGPKEHLGVAAKRGEAKFQVDNFWTRLWGKKELEKLYRI 864

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BLAST of BraAnng001050.3.5C.1 vs. GenBank_protein
Match: XP_033142372.1 (uncharacterized protein LOC117132434 isoform X1 [Brassica rapa] >CAF2129427.1 unnamed protein product [Brassica napus])

HSP 1 Score: 1670 bits (4326), Expect = 0.000e+0
Identity = 862/879 (98.07%), Postives = 864/879 (98.29%), Query Frame = 0

Query:    1 MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGSVFNKADKLKGKAPGQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQLDNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDMAVNGDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNSGRSVEDFFQTIEEVVENDYKSLSNEECFFIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAGGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKETAERLSKSQTAFDSQNHAAMVKEQTEAKYYKAYRRFNSTLKKAFVDSLRTRQELRQRAVEHPLGKAEATEEQTFVKTEDHGFQGAQEDKEEVKEINTISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKEFAGPKEHLGVAAKRGEAKFQVDNFWTRLWGKKELEKLYQM 879
            MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGSVFNKADKLKGKAPGQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQLDNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDMAVNGDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNSGRSVEDFFQTIEEVVENDYKSLSNEECFFIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAGGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKETAERLSKSQTAFDSQNHAAMVKEQTE               KAFVDSLRTRQELRQRAVEHPLGKAEATEEQTFVKTEDHGFQGAQEDKEEVKEINTISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKEFAGPKEHLGVAAKRGEAKFQVDNFWTRLWGKKELEKLY++
Sbjct:    1 MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGSVFNKADKLKGKAPGQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQLDNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDMAVNGDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNSGRSVEDFFQTIEEVVENDYKSLSNEECFFIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAGGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKETAERLSKSQTAFDSQNHAAMVKEQTE---------------KAFVDSLRTRQELRQRAVEHPLGKAEATEEQTFVKTEDHGFQGAQEDKEEVKEINTISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKEFAGPKEHLGVAAKRGEAKFQVDNFWTRLWGKKELEKLYRI 864

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BLAST of BraAnng001050.3.5C.1 vs. GenBank_protein
Match: XP_033138977.1 (uncharacterized protein LOC117129864 isoform X2 [Brassica rapa])

HSP 1 Score: 1669 bits (4321), Expect = 0.000e+0
Identity = 861/879 (97.95%), Postives = 863/879 (98.18%), Query Frame = 0

Query:    1 MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGSVFNKADKLKGKAPGQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQLDNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDMAVNGDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNSGRSVEDFFQTIEEVVENDYKSLSNEECFFIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAGGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKETAERLSKSQTAFDSQNHAAMVKEQTEAKYYKAYRRFNSTLKKAFVDSLRTRQELRQRAVEHPLGKAEATEEQTFVKTEDHGFQGAQEDKEEVKEINTISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKEFAGPKEHLGVAAKRGEAKFQVDNFWTRLWGKKELEKLYQM 879
            MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGSVFNKADKLKGKAPGQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQLDNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDMAVNGDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNSGRSVEDFFQTIEEVVENDYKSLSNEECFFIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAGGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKETAERLSKSQTAFDSQNHAAMVKEQTEA                FVDSLRTRQELRQRAVEHPLGKAEATEEQTFVKTEDHGFQGAQEDKEEVKEINTISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKEFAGPKEHLGVAAKRGEAKFQVDNFWTRLWGKKELEKLY++
Sbjct:    1 MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGSVFNKADKLKGKAPGQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQLDNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDMAVNGDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNSGRSVEDFFQTIEEVVENDYKSLSNEECFFIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAGGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKETAERLSKSQTAFDSQNHAAMVKEQTEA----------------FVDSLRTRQELRQRAVEHPLGKAEATEEQTFVKTEDHGFQGAQEDKEEVKEINTISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKEFAGPKEHLGVAAKRGEAKFQVDNFWTRLWGKKELEKLYRI 863

[Close]

BLAST of BraAnng001050.3.5C.1 vs. GenBank_protein
Match: XP_033142374.1 (uncharacterized protein LOC117132434 isoform X2 [Brassica rapa])

HSP 1 Score: 1669 bits (4321), Expect = 0.000e+0
Identity = 861/879 (97.95%), Postives = 863/879 (98.18%), Query Frame = 0

Query:    1 MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGSVFNKADKLKGKAPGQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQLDNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDMAVNGDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNSGRSVEDFFQTIEEVVENDYKSLSNEECFFIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAGGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKETAERLSKSQTAFDSQNHAAMVKEQTEAKYYKAYRRFNSTLKKAFVDSLRTRQELRQRAVEHPLGKAEATEEQTFVKTEDHGFQGAQEDKEEVKEINTISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKEFAGPKEHLGVAAKRGEAKFQVDNFWTRLWGKKELEKLYQM 879
            MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGSVFNKADKLKGKAPGQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQLDNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDMAVNGDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNSGRSVEDFFQTIEEVVENDYKSLSNEECFFIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAGGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKETAERLSKSQTAFDSQNHAAMVKEQTEA                FVDSLRTRQELRQRAVEHPLGKAEATEEQTFVKTEDHGFQGAQEDKEEVKEINTISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKEFAGPKEHLGVAAKRGEAKFQVDNFWTRLWGKKELEKLY++
Sbjct:    1 MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGSVFNKADKLKGKAPGQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQLDNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDMAVNGDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNSGRSVEDFFQTIEEVVENDYKSLSNEECFFIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAGGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKETAERLSKSQTAFDSQNHAAMVKEQTEA----------------FVDSLRTRQELRQRAVEHPLGKAEATEEQTFVKTEDHGFQGAQEDKEEVKEINTISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKEFAGPKEHLGVAAKRGEAKFQVDNFWTRLWGKKELEKLYRI 863

[Close]

BLAST of BraAnng001050.3.5C.1 vs. GenBank_protein
Match: XP_013736949.1 (uncharacterized protein LOC106439940 isoform X1 [Brassica napus])

HSP 1 Score: 1568 bits (4061), Expect = 0.000e+0
Identity = 831/887 (93.69%), Postives = 834/887 (94.02%), Query Frame = 0

Query:    1 MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGSVFNKADKLKG----KAPGQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQLDNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDMAVNGDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNSGRSVEDFFQTIEEVVENDYKSLSNEECFFIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAGGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKETAERL----SKSQTAFDSQNHAAMVKEQTEAKYYKAYRRFNSTLKKAFVDSLRTRQELRQRAVEHPLGKAEATEEQTFVKTEDHGFQGAQEDKEEVKEINTISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKEFAGPKEHLGVAAKRGEAKFQVDNFWTRLWGKKELEKLYQM 879
            MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPK VQQALSS GISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGS   KADKLKG    KAP QQ TRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQ DNDSQSRDAF KCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDM V GDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNG+PKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNS RSVED  QTIEEV ENDYKSL   ECF IELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGD ESSSA GATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKE AERL    SKSQTAFDSQNHAAMVKEQTE               KAFVDSLRTRQELRQRAVEHPLGKAEATEEQT VKTEDHGFQGAQEDKEEVKEIN ISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKE      HLGVAAKRGEAKFQVDNFWTRLWGKKELEKLY++
Sbjct:    1 MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPKAVQQALSSTGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGS---KADKLKGMYVPKAPSQQVTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQ-DNDSQSRDAFTKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDMTVIGDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGLPKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNSERSVEDLLQTIEEVGENDYKSL---ECFLIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDPESSSARGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKENAERLEKVLSKSQTAFDSQNHAAMVKEQTE---------------KAFVDSLRTRQELRQRAVEHPLGKAEATEEQTLVKTEDHGFQGAQEDKEEVKEINAISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKE------HLGVAAKRGEAKFQVDNFWTRLWGKKELEKLYRI 859

[Close]

BLAST of BraAnng001050.3.5C.1 vs. GenBank_protein
Match: XP_013736950.1 (uncharacterized protein LOC106439940 isoform X2 [Brassica napus])

HSP 1 Score: 1566 bits (4056), Expect = 0.000e+0
Identity = 830/887 (93.57%), Postives = 833/887 (93.91%), Query Frame = 0

Query:    1 MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGSVFNKADKLKG----KAPGQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQLDNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDMAVNGDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNSGRSVEDFFQTIEEVVENDYKSLSNEECFFIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAGGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKETAERL----SKSQTAFDSQNHAAMVKEQTEAKYYKAYRRFNSTLKKAFVDSLRTRQELRQRAVEHPLGKAEATEEQTFVKTEDHGFQGAQEDKEEVKEINTISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKEFAGPKEHLGVAAKRGEAKFQVDNFWTRLWGKKELEKLYQM 879
            MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPK VQQALSS GISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGS   KADKLKG    KAP QQ TRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQ DNDSQSRDAF KCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDM V GDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNG+PKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNS RSVED  QTIEEV ENDYKSL   ECF IELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGD ESSSA GATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKE AERL    SKSQTAFDSQNHAAMVKEQTEA                FVDSLRTRQELRQRAVEHPLGKAEATEEQT VKTEDHGFQGAQEDKEEVKEIN ISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKE      HLGVAAKRGEAKFQVDNFWTRLWGKKELEKLY++
Sbjct:    1 MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPKAVQQALSSTGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGS---KADKLKGMYVPKAPSQQVTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQ-DNDSQSRDAFTKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDMTVIGDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGLPKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNSERSVEDLLQTIEEVGENDYKSL---ECFLIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDPESSSARGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKENAERLEKVLSKSQTAFDSQNHAAMVKEQTEA----------------FVDSLRTRQELRQRAVEHPLGKAEATEEQTLVKTEDHGFQGAQEDKEEVKEINAISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKE------HLGVAAKRGEAKFQVDNFWTRLWGKKELEKLYRI 858

[Close]

BLAST of BraAnng001050.3.5C.1 vs. GenBank_protein
Match: KAG5406407.1 (hypothetical protein IGI04_012526 [Brassica rapa subsp. trilocularis])

HSP 1 Score: 1319 bits (3413), Expect = 0.000e+0
Identity = 700/775 (90.32%), Postives = 705/775 (90.97%), Query Frame = 0

Query:   90 KKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGSVFNKADKLKGKAPGQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQLDNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKK-STVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDMAVNGDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNSGRSVEDFFQTIEEVVENDYKSLSNEECFFIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAGGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKETAERLSKSQTAFDSQNHAAMVKEQTEAKYYKAYRRFNSTLKKAFVDSLRTRQELRQRAVEHPLGKAEATEEQTFVKTEDHGFQGAQEDKEEVKEINTISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKEFAGPKEHLGVAAKRGEAKFQVDNF 863
            KKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGSVFNKADKLKGKAPGQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQLDNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKK STVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDM V GD AEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKEL+IKLVEAPENMDYLDKQRQELGERCATNSGRSVEDFFQT EEVVENDYKSLSNEECFFIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAGGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKETAERLSK++TAFDSQNHAAMVKEQTEA+                                                        AQEDKEEVKEIN ISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKE      HLGVAAKRGEAKFQ+  F
Sbjct:  289 KKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGSVFNKADKLKGKAPGQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQLDNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDMTVIGDIAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKELEIKLVEAPENMDYLDKQRQELGERCATNSGRSVEDFFQTFEEVVENDYKSLSNEECFFIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAGGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKETAERLSKTETAFDSQNHAAMVKEQTEAR--------------------------------------------------------AQEDKEEVKEINAISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKE------HLGVAAKRGEAKFQLSTF 1001

[Close]

BLAST of BraAnng001050.3.5C.1 vs. GenBank_protein
Match: CAF2017811.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 1274 bits (3297), Expect = 0.000e+0
Identity = 709/879 (80.66%), Postives = 732/879 (83.28%), Query Frame = 0

Query:    1 MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIAT--RSCCSFGSEHALSTQAMDSGSVFNKADKLKG----KAPGQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQ----ALIDAKECVQLDNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKH----IDD--------LRDRHQLQEKIIQDNGLPKDMAVNGDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNSGRSVEDFFQTIEEVVENDYKSLSNEECFFIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAGGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKETAERLSKSQTAFDSQNHAAMVKEQTEAKYYKAYRRFNSTL-----------------------KKAFVDSLRTRQELRQRAVEHPLGKAEATEEQTFVKTEDHGFQGAQEDKEEVKEINTISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPE 834
            M FDS ITH AEA+YATAKTSVWWD+ENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTI+AYGNTELIPK +QQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIAT   S  SFGSEHALSTQAMDSG VFNKADKLKG    KA  QQ TRRKKL KEWRVCNVACKSTD FT AREQA Q    ALIDAKECVQ DNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVF                          TQNDIEIEKLEDMTKKKKSTVIE KYEPYVC ICNV+C HP+VFESHHKGRKHAAK  K     +DD        L D  Q+Q+++IQDN LPKDM V  DK EPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPK      + K VEAPENMDYLDKQRQELGERC T S RSVEDF QTIEEV ENDYKSL   ECFF+ELN E SASEESREC+DAIFKKPEVS+DANL+RE ENIPSQNLEMNSGDSESSSAGGATEHPEEYM +MKKEKV KSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKE AERL K      S++   MVKEQTEA +      F S                          KAFVDSLRTRQELRQRAVEHPLGKA+ATEEQT VKTEDHGFQGAQE KEEVKEIN ISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKH+PQTTP+
Sbjct:    1 MRFDS-ITHTAEAEYATAKTSVWWDIENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTITAYGNTELIPKHIQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATGCHSSRSFGSEHALSTQAMDSGCVFNKADKLKGMYVPKAASQQETRRKKLHKEWRVCNVACKSTDIFTTAREQAAQVSILALIDAKECVQ-DNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFKS------------------------TQNDIEIEKLEDMTKKKKSTVIEDKYEPYVCNICNVICDHPAVFESHHKGRKHAAKIKKQADKKVDDDTLLLKQALLDNKQIQDEVIQDNSLPKDMTVIEDKDEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPK------KEKPVEAPENMDYLDKQRQELGERCGT-SERSVEDFIQTIEEVGENDYKSL---ECFFVELNPELSASEESRECLDAIFKKPEVSEDANLSRELENIPSQNLEMNSGDSESSSAGGATEHPEEYM-DMKKEKVAKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKENAERLKK----VLSKSQTTMVKEQTEASFITLLLCFLSGTWNLLLFFLMVSITKHTVGLIPIESKAFVDSLRTRQELRQRAVEHPLGKADATEEQTLVKTEDHGFQGAQEVKEEVKEINAISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHRPQTTPQ 838

[Close]

BLAST of BraAnng001050.3.5C.1 vs. GenBank_protein
Match: KAF3595822.1 (hypothetical protein DY000_02026304 [Brassica cretica])

HSP 1 Score: 1253 bits (3241), Expect = 0.000e+0
Identity = 699/915 (76.39%), Postives = 729/915 (79.67%), Query Frame = 0

Query:    1 MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGSVFNKADKLKG----KAPGQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQ------------------------------ALIDAKECVQLDNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDMAVNGDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNSGRSVEDFFQTIEEVVENDYKSLSNEECFFIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAGGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKETAERL----SKSQTAFDSQNHAAMVKEQTEAKYYKAYRRFNSTLKKAFVDSLRTRQELRQRAVEHPLGKAEATEEQTFVKTEDHGFQGAQEDKEEVKEINTISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKEFAGPKEHLGVAAKRGEAKFQVDNFWTRLWGKKELEKLY 877
            MCFDSSITH AEA+YATAKTSVWWD+ENCPVPKGWDAH+IAQKL+SAL+NLNYRGPLTI+AYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSC SFGSEHALSTQAM SG VFNKADKLKG    KAP QQ TRRKKLQKEWRVCNVACKSTDTFTMAREQA +                              ALIDAKECVQ DNDSQSRDAFMKCLE+QNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKE                                                                             L D  Q+QE++IQDN LPKDM V GDKAEPYVCSICNV CAHPSVFESH KGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPK      + K VEAPENMDYLDKQR+EL ERCATNS RSVEDFFQTIEEV ENDYKSL   ECFF+ELN E SAS+ESREC+DAIFKKPEVS+DANL+RE E+IPSQ  +MNSGDSESSS G ATEHPEEYM +MKKEKV KSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHI GKIHQ+KRERMSEREAMLSKE AERL    SKSQTAF SQNH+AM  ++ EAK                +D      ELRQRA+EHPLGKA+ATEEQT VKTEDHGFQGAQEDKEEVKEIN ISENLTRAFIGMNQESSVPKES+GCLDVIPQRVK PADVNVTEKLEDESKHKPQTTP+EPLKEFAG KEHLGVAAKRGEAKFQVDNFWTRLWGKKELEKLY
Sbjct:    1 MCFDSSITHTAEAEYATAKTSVWWDIENCPVPKGWDAHTIAQKLSSALLNLNYRGPLTITAYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATRSCYSFGSEHALSTQAMGSGCVFNKADKLKGIYVQKAPSQQETRRKKLQKEWRVCNVACKSTDTFTMAREQAAELKQNLELLGETENIASASSGCHEQDTEIMMALIDAKECVQ-DNDSQSRDAFMKCLEEQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEA----------------------------------------------------------------------------LLDNKQIQEEVIQDNSLPKDMTVIGDKAEPYVCSICNVTCAHPSVFESHLKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPK------KEKPVEAPENMDYLDKQRRELVERCATNSERSVEDFFQTIEEVGENDYKSL---ECFFVELNPELSASKESRECLDAIFKKPEVSEDANLSRELESIPSQ--KMNSGDSESSSEG-ATEHPEEYM-DMKKEKVAKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHIGGKIHQRKRERMSEREAMLSKENAERLKKVVSKSQTAFASQNHSAMKNKEKEAK---------------LMDFC----ELRQRALEHPLGKADATEEQTLVKTEDHGFQGAQEDKEEVKEINAISENLTRAFIGMNQESSVPKESKGCLDVIPQRVKVPADVNVTEKLEDESKHKPQTTPQEPLKEFAGLKEHLGVAAKRGEAKFQVDNFWTRLWGKKELEKLY 806

[Close]

BLAST of BraAnng001050.3.5C.1 vs. GenBank_protein
Match: XP_013597162.1 (PREDICTED: uncharacterized protein LOC106305328 isoform X3 [Brassica oleracea var. oleracea])

HSP 1 Score: 1244 bits (3218), Expect = 0.000e+0
Identity = 700/927 (75.51%), Postives = 724/927 (78.10%), Query Frame = 0

Query:    1 MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTISAYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIAT-----RSCCSFGSEHALSTQAMDSGSVFNKADKLKG----KAPGQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQ--------------------------------------ALIDAKE---CVQLDNDSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKSTVIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQLQEKIIQDNGLPKDMAVNGDKAEPYVCSICNVICAHPSVFESHHKGRKHAAKIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKELQIKLVEAPENMDYLDKQRQELGERCATNSGRSVEDFFQTIEEVVENDYKSLSNEECFFIELNSEFSASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAGGATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSEREAMLSKETAERLSKSQTAFDSQNHAAMVKEQTEAKYYKAYRRFNSTLKKAFVDSLRTRQELRQRAVEHPLGKAEATEEQTFVKTEDHGFQGAQEDKEEVKEINTISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKEFAGPKEHLGVAAKRGEAKFQVDNFWTRLWGKKELEKLY 877
            M FDS ITH AEA+Y TAKTSVWWD+ENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTI+AYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIAT     RSCCSFGSEHALSTQAMDSG VFN ADKLKG    KAP QQ TRRKKLQKE RVCNVACKSTD FT AREQA +                                      ALIDAK    CVQ DN SQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAI  KLE TQNDIEIEKLEDMTKKKKSTVIE KYEPYVC ICNVVC HP+VFESHHKGRKHAAK  K  D L D  Q+Q+++IQDNGL K                                                                       ELQIK V+APENMDYLD QRQEL E C        E+ FQTIEEV E+DYKSL N EC F ELN E S S+ESREC+DAIFKKPEVS+DANL+RE E+IPSQNLEMNSGDSESSSAGGATEHPEEYM +MKKEKV KSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSER+AMLSKE AERL K      S++   MVKEQTE               KAFVDSLRTRQELRQRAVEHPLGKA+ATEEQT VKTEDHGFQGAQEDKEEVKEIN+ISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTP+EPLKEFAG KEHLGVAAKRGEAKFQVDNFWTRLWGKKELEKLY
Sbjct:    1 MRFDS-ITHTAEAEYVTAKTSVWWDIENCPVPKGWDAHSIAQKLNSALVNLNYRGPLTITAYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILVDMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFLVASARTSWMWRSLIATGSHSSRSCCSFGSEHALSTQAMDSGCVFNNADKLKGIYVQKAPSQQETRRKKLQKELRVCNVACKSTDIFTTAREQAAELKQNLELLGEPGNIASASSGCHEQDTEIMMVEMKKQTDALIDAKNIEACVQ-DNYSQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSVDHVFSELSRDFHVPKEVRECFEAIFKKLESTQNDIEIEKLEDMTKKKKSTVIEYKYEPYVCNICNVVCDHPAVFESHHKGRKHAAKIKKQADALLDNKQIQDEVIQDNGLTK-----------------------------------------------------------------------ELQIKPVKAPENMDYLDDQRQELREGCD-------EEKFQTIEEVGESDYKSLPNAECLFTELNPELSPSKESRECLDAIFKKPEVSEDANLSRELESIPSQNLEMNSGDSESSSAGGATEHPEEYM-DMKKEKVAKSSVSTKPITKEPKVLQLVWCQICRISCESKVAYANHICGKIHQQKRERMSERDAMLSKENAERLKK----VLSKSQTTMVKEQTE---------------KAFVDSLRTRQELRQRAVEHPLGKADATEEQTLVKTEDHGFQGAQEDKEEVKEINSISENLTRAFIGMNQESSVPKESRGCLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPQEPLKEFAGLKEHLGVAAKRGEAKFQVDNFWTRLWGKKELEKLY 827

The following BLAST results are available for this feature:

BLAST of BraAnng001050.3.5C.1 vs. GenBank_protein

BLAST of BraAnng001050.3.5C.1 vs. GenBank_protein
Analysis Date: 2022-02-26 (Diamond on OGS3.5 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
XP_033138975.1	0.000e+0	98.07	uncharacterized protein LOC117129864 isoform X1 [B...	[more]
XP_033142372.1	0.000e+0	98.07	uncharacterized protein LOC117132434 isoform X1 [B...	[more]
XP_033138977.1	0.000e+0	97.95	uncharacterized protein LOC117129864 isoform X2 [B...	[more]
XP_033142374.1	0.000e+0	97.95	uncharacterized protein LOC117132434 isoform X2 [B...	[more]
XP_013736949.1	0.000e+0	93.69	uncharacterized protein LOC106439940 isoform X1 [B...	[more]
XP_013736950.1	0.000e+0	93.57	uncharacterized protein LOC106439940 isoform X2 [B...	[more]
KAG5406407.1	0.000e+0	90.32	hypothetical protein IGI04_012526 [Brassica rapa s...	[more]
CAF2017811.1	0.000e+0	80.66	unnamed protein product [Brassica napus]	[more]
KAF3595822.1	0.000e+0	76.39	hypothetical protein DY000_02026304 [Brassica cret...	[more]
XP_013597162.1	0.000e+0	75.51	PREDICTED: uncharacterized protein LOC106305328 is...	[more]

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GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005777	peroxisome
molecular_function	GO:1903231	mRNA binding involved in posttranscriptional gene silencing
molecular_function	GO:0004540	ribonuclease activity
molecular_function	GO:0008270	zinc ion binding

InterPro

Analysis Name: InterProScan on OGS3.5
Date Performed: 2022-02-26


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 258..278
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 611..668 e-value: 1.7E-6 score: 29.5 coord: 406..456 e-value: 2.2E-9 score: 38.7 coord: 336..390 e-value: 9.9E-9 score: 36.6
None	No IPR available	PFAM	PF12874	zf-met	coord: 639..662 e-value: 0.0012 score: 19.1 coord: 359..383 e-value: 1.5E-4 score: 22.0 coord: 424..448 e-value: 1.1E-4 score: 22.4
None	No IPR available	GENE3D	3.40.50.1010		coord: 12..162 e-value: 6.2E-6 score: 28.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 582..604
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 582..601
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 816..843
None	No IPR available	PANTHER	PTHR14379:SF38	BNAC07G49870D PROTEIN	coord: 2..415 coord: 416..663
None	No IPR available	CDD	cd10910	PIN_limkain_b1_N_like	coord: 19..143 e-value: 1.78315E-61 score: 202.078
IPR003604	Matrin/U1-C-like, C2H2-type zinc finger	SMART	SM00451	ZnF_U1_5	coord: 356..390 e-value: 0.0073 score: 25.5 coord: 635..669 e-value: 0.0039 score: 26.4 coord: 421..455 e-value: 1.1E-6 score: 38.2
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 359..383 e-value: 0.98 score: 18.4 coord: 638..662 e-value: 56.0 score: 6.6 coord: 424..448 e-value: 2.0 score: 17.4
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 361..383
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 426..448
IPR021139	NYN domain, MARF1-type	PFAM	PF01936	NYN	coord: 19..154 e-value: 1.3E-28 score: 100.3
IPR024768	Meiosis regulator and mRNA stability factor 1	PANTHER	PTHR14379	LIMKAIN B LKAP	coord: 2..415 coord: 416..663
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 418..455
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 624..669
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 350..388

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Scaffold0210	contig	Scaffold0210:11517..17854 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS3.5	2022-02-26
Diamond on OGS3.5 vs NR	2022-02-26
Blast2GO on OGS3.5	2022-02-26

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
BraAnng001050.3.5C.1	BraAnng001050.3.5C.1	Brassica rapa chifu	mRNA	Scaffold0210 11517..17854 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>BraAnng001050.3.5C.1-P1 ID=BraAnng001050.3.5C.1-P1|Name=BraAnng001050.3.5C.1|organism=Brassica rapa chifu|type=polypeptide|length=904bp
MCFDSSITHAAEADYATAKTSVWWDVENCPVPKGWDAHSIAQKLNSALVN
LNYRGPLTISAYGNTELIPKPVQQALSSAGISLNHVPSGKKDASDKKILV
DMFLWVLENPAPANLMLISGDGDFSYALNRLRMLRYNILLAHPLQASPFL
VASARTSWMWRSLIATRSCCSFGSEHALSTQAMDSGSVFNKADKLKGKAP
GQQGTRRKKLQKEWRVCNVACKSTDTFTMAREQAPQALIDAKECVQLDND
SQSRDAFMKCLEKQNKELMETIATSERSGREFWHDFKERLDKSGVAPLSV
DHVFSELSRDFHVPKEVRECFEAILMKLEPTQNDIEIEKLEDMTKKKKST
VIESKYEPYVCTICNVVCAHPSVFESHHKGRKHAAKFNKHIDDLRDRHQL
QEKIIQDNGLPKDMAVNGDKAEPYVCSICNVICAHPSVFESHHKGRKHAA
KIKKQADDTLSLKQALLGDQQIQDNGVPKDMKKELQIKLVEAPENMDYLD
KQRQELGERCATNSGRSVEDFFQTIEEVVENDYKSLSNEECFFIELNSEF
SASEESRECIDAIFKKPEVSQDANLTREFENIPSQNLEMNSGDSESSSAG
GATEHPEEYMMNMKKEKVTKSSVSTKPITKEPKVLQLVWCQICRISCESK
VAYANHICGKIHQQKRERMSEREAMLSKETAERLSKSQTAFDSQNHAAMV
KEQTEAKYYKAYRRFNSTLKKAFVDSLRTRQELRQRAVEHPLGKAEATEE
QTFVKTEDHGFQGAQEDKEEVKEINTISENLTRAFIGMNQESSVPKESRG
CLDVIPQRVKAPADVNVTEKLEDESKHKPQTTPEEPLKEFAGPKEHLGVA
AKRGEAKFQVDNFWTRLWGKKELEKLYQMNIALQILSKPMDITSLTSEKL
EIA.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036236	Znf_C2H2_sf
IPR024768	Marf1
IPR021139	NYN_MARF1
IPR013087	Znf_C2H2_type
IPR003604	Matrin/U1-like-C_Znf_C2H2

Vocabulary: **Molecular Function**
Term	Definition
GO:0004540	ribonuclease activity
GO:0008270	zinc ion binding
GO:1903231	mRNA binding involved in posttranscriptional gene silencing

Vocabulary: **Biological Process**
Term	Definition
GO:0010468	regulation of gene expression

Vocabulary: **Cellular Component**
Term	Definition
GO:0005777	peroxisome

Orthology

View orthology data for BraAnng001050.3.5C.1-P1