BraAnng004550.3.5C.1-P1 (polypeptide) Brassica rapa chifu
You are viewing a polypeptide, more information available on the corresponding mRNA page
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Overview
Homology
BLAST of BraAnng004550.3.5C.1 vs. GenBank_protein
Match: XP_013729821.1 (uncharacterized protein LOC106433536 [Brassica napus] >KAF2549579.1 hypothetical protein F2Q70_00024138 [Brassica cretica] >RID64722.1 hypothetical protein BRARA_E03640 [Brassica rapa] >VDD25009.1 unnamed protein product [Brassica rapa]) HSP 1 Score: 243 bits (619), Expect = 1.330e-78 Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 Query: 1 MDSLRFNLQQSPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYEKVV 120
MDSLRFNLQQSPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYEKVV
Sbjct: 1 MDSLRFNLQQSPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYEKVV 120
BLAST of BraAnng004550.3.5C.1 vs. GenBank_protein
Match: XP_009124042.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC103848959 [Brassica rapa]) HSP 1 Score: 241 bits (615), Expect = 5.750e-78 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0 Query: 1 MDSLRFNLQQSPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYEKV 119
MDSLRFNLQQSPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYEKV
Sbjct: 1 MDSLRFNLQQSPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYEKV 119
BLAST of BraAnng004550.3.5C.1 vs. GenBank_protein
Match: XP_013584113.1 (PREDICTED: uncharacterized protein LOC106292986 [Brassica oleracea var. oleracea] >KAF3584769.1 hypothetical protein F2Q69_00032583 [Brassica cretica] >KAG2273333.1 hypothetical protein Bca52824_067888 [Brassica carinata]) HSP 1 Score: 240 bits (612), Expect = 1.540e-77 Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 0 Query: 1 MDSLRFNLQQSPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYEKVV 120
MDSL+FNLQQSPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYE+VV
Sbjct: 1 MDSLQFNLQQSPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYERVV 120
BLAST of BraAnng004550.3.5C.1 vs. GenBank_protein
Match: KAG5399425.1 (hypothetical protein IGI04_021239 [Brassica rapa subsp. trilocularis]) HSP 1 Score: 239 bits (611), Expect = 2.190e-77 Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0 Query: 1 MDSLRFNLQQSPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYEKVV 120
MDSLRFNLQQSPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNA PDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYEKVV
Sbjct: 1 MDSLRFNLQQSPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNARPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYEKVV 120
BLAST of BraAnng004550.3.5C.1 vs. GenBank_protein
Match: CAF1793755.1 (unnamed protein product [Brassica napus]) HSP 1 Score: 238 bits (607), Expect = 8.850e-77 Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0 Query: 1 MDSLRFNLQQSPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYEKVV 120
MDSLRFNLQQSPFQLRPRRTIRPRITNISNQTEET+ RPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYEKVV
Sbjct: 1 MDSLRFNLQQSPFQLRPRRTIRPRITNISNQTEETETRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYEKVV 120
BLAST of BraAnng004550.3.5C.1 vs. GenBank_protein
Match: KAF3612210.1 (hypothetical protein DY000_02051684 [Brassica cretica]) HSP 1 Score: 238 bits (606), Expect = 1.260e-76 Identity = 117/120 (97.50%), Postives = 118/120 (98.33%), Query Frame = 0 Query: 1 MDSLRFNLQQSPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYEKVV 120
MDSLRFNL Q PFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNH+DDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYEKVV
Sbjct: 1 MDSLRFNLPQYPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHIDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYEKVV 120
BLAST of BraAnng004550.3.5C.1 vs. GenBank_protein
Match: KAG2273372.1 (hypothetical protein Bca52824_067927 [Brassica carinata]) HSP 1 Score: 229 bits (585), Expect = 1.930e-73 Identity = 113/120 (94.17%), Postives = 116/120 (96.67%), Query Frame = 0 Query: 1 MDSLRFNLQQSPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYEKVV 120
MDSLRFNLQQSPF LRPRRT+RP I+NISNQTEETDPRP SSAGKIQRLVLNNEGRTKLNA PDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLD+MSSWVSHLPEEVKYEKVV
Sbjct: 1 MDSLRFNLQQSPFHLRPRRTLRPSISNISNQTEETDPRPTSSAGKIQRLVLNNEGRTKLNADPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDMMSSWVSHLPEEVKYEKVV 120
BLAST of BraAnng004550.3.5C.1 vs. GenBank_protein
Match: KAF8081813.1 (hypothetical protein N665_0866s0018 [Sinapis alba]) HSP 1 Score: 228 bits (581), Expect = 7.820e-73 Identity = 112/120 (93.33%), Postives = 115/120 (95.83%), Query Frame = 0 Query: 1 MDSLRFNLQQSPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYEKVV 120
MDSLRFNLQQSPFQ RPRRT+RPRITNISNQTEE DPRP S AGKIQRLVLNNEGRTKLNA PDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLD+MSSWVSHLP+EVKYEKVV
Sbjct: 1 MDSLRFNLQQSPFQFRPRRTLRPRITNISNQTEENDPRPSSLAGKIQRLVLNNEGRTKLNADPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDMMSSWVSHLPKEVKYEKVV 120
BLAST of BraAnng004550.3.5C.1 vs. GenBank_protein
Match: XP_018432713.1 (PREDICTED: uncharacterized protein LOC108805226 [Raphanus sativus]) HSP 1 Score: 228 bits (580), Expect = 1.180e-72 Identity = 111/120 (92.50%), Postives = 116/120 (96.67%), Query Frame = 0 Query: 1 MDSLRFNLQQSPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSWVSHLPEEVKYEKVV 120
MDSLRFNL QSPFQLRPR+T RPRIT+ISNQTEETDPRP SS GKIQRLVLNNEGRTKLN+GPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLD+MSSWVSHLPEEVK+EKVV
Sbjct: 1 MDSLRFNLHQSPFQLRPRKTFRPRITSISNQTEETDPRPTSSPGKIQRLVLNNEGRTKLNSGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDMMSSWVSHLPEEVKFEKVV 120
BLAST of BraAnng004550.3.5C.1 vs. GenBank_protein
Match: CDY37508.1 (BnaA05g33730D [Brassica napus]) HSP 1 Score: 215 bits (548), Expect = 4.140e-68 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 Query: 1 MDSLRFNLQQSPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSW 106
MDSLRFNLQQSPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSW
Sbjct: 1 MDSLRFNLQQSPFQLRPRRTIRPRITNISNQTEETDPRPPSSAGKIQRLVLNNEGRTKLNAGPDREFYSYPRFVNHVDDGFISSLTDLYRNRLRSGSIVLDLMSSW 106 The following BLAST results are available for this feature:
BLAST of BraAnng004550.3.5C.1 vs. GenBank_protein
Analysis Date: 2022-02-26 (Diamond on OGS3.5 vs NR) Total hits: 20 ZOOMx 1POSITION0
Pagesback to topGO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterProScan on OGS3.5
Date Performed: 2022-02-26 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BraAnng004550.3.5C.1-P1 ID=BraAnng004550.3.5C.1-P1|Name=BraAnng004550.3.5C.1|organism=Brassica rapa chifu|type=polypeptide|length=122bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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