BolC1t00210H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	BolC1t00210H-R
Unique Name	BolC1t00210H-R-P
Type	polypeptide
Organism	Brassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length	252

Homology

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BLAST of BolC1t00210H-R vs. GenBank_protein
Match: CAF2067433.1 (unnamed protein product [Brassica napus] >VDD47821.1 unnamed protein product [Brassica oleracea])

HSP 1 Score: 490 bits (1262), Expect = 1.300e-174
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0

Query:    1 MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETSPATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251
            MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETSPATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG
Sbjct:    1 MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETSPATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251

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BLAST of BolC1t00210H-R vs. GenBank_protein
Match: XP_013604880.1 (PREDICTED: thioredoxin-like protein HCF164, chloroplastic [Brassica oleracea var. oleracea])

HSP 1 Score: 488 bits (1257), Expect = 7.520e-174
Identity = 250/251 (99.60%), Postives = 250/251 (99.60%), Query Frame = 0

Query:    1 MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETSPATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251
            MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQA PESSEPQEKLVVDNGSTSETSPATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG
Sbjct:    1 MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQANPESSEPQEKLVVDNGSTSETSPATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251

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BLAST of BolC1t00210H-R vs. GenBank_protein
Match: XP_009140776.1 (thioredoxin-like protein HCF164, chloroplastic [Brassica rapa] >KAG5412615.1 hypothetical protein IGI04_000182 [Brassica rapa subsp. trilocularis] >RID77253.1 hypothetical protein BRARA_A00181 [Brassica rapa])

HSP 1 Score: 481 bits (1237), Expect = 8.730e-171
Identity = 247/252 (98.02%), Postives = 251/252 (99.60%), Query Frame = 0

Query:    1 MAAARLVFSLS-LPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETSPATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251
            MAA+RLVFSLS LPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATP+SSEPQEKLVVDNGST+ETSPA+KEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG
Sbjct:    1 MAASRLVFSLSRLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPDSSEPQEKLVVDNGSTNETSPASKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 252

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BLAST of BolC1t00210H-R vs. GenBank_protein
Match: XP_013738380.1 (thioredoxin-like protein HCF164, chloroplastic [Brassica napus] >CAF2146554.1 unnamed protein product [Brassica napus] >VDC73686.1 unnamed protein product [Brassica rapa])

HSP 1 Score: 480 bits (1236), Expect = 1.240e-170
Identity = 248/252 (98.41%), Postives = 250/252 (99.21%), Query Frame = 0

Query:    1 MAAARLVFSLS-LPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETSPATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251
            MAAA LVFSLS LPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATP+SSEPQEKLVVDNGSTSETSPA+KEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG
Sbjct:    1 MAAAGLVFSLSRLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPDSSEPQEKLVVDNGSTSETSPASKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 252

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BLAST of BolC1t00210H-R vs. GenBank_protein
Match: XP_013732487.1 (thioredoxin-like protein HCF164, chloroplastic [Brassica napus])

HSP 1 Score: 476 bits (1224), Expect = 8.370e-169
Identity = 246/252 (97.62%), Postives = 248/252 (98.41%), Query Frame = 0

Query:    1 MAAARLVFSLS-LPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETSPATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251
            MAAARLVFSLS LPSSTHGINRKFQPFLL QTVAP RVRALRCQATPESSEPQEKLVVD+ STSETSPA+KEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG
Sbjct:    1 MAAARLVFSLSRLPSSTHGINRKFQPFLLAQTVAPYRVRALRCQATPESSEPQEKLVVDDSSTSETSPASKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 252

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BLAST of BolC1t00210H-R vs. GenBank_protein
Match: KAF2543146.1 (hypothetical protein F2Q68_00028712 [Brassica cretica])

HSP 1 Score: 473 bits (1216), Expect = 1.240e-167
Identity = 246/252 (97.62%), Postives = 247/252 (98.02%), Query Frame = 0

Query:    1 MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETS-PATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251
            MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVR   CQ+TPESSEPQEKLVVDNGSTSETS PATKE SSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG
Sbjct:    1 MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVR---CQSTPESSEPQEKLVVDNGSTSETSSPATKETSSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 249

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BLAST of BolC1t00210H-R vs. GenBank_protein
Match: KAF3530111.1 (hypothetical protein DY000_02036394 [Brassica cretica])

HSP 1 Score: 471 bits (1213), Expect = 3.570e-167
Identity = 246/252 (97.62%), Postives = 246/252 (97.62%), Query Frame = 0

Query:    1 MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETS-PATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251
            MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVR   CQATPESSEPQEKLVVDNGSTSETS PATKE S GFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG
Sbjct:    1 MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVR---CQATPESSEPQEKLVVDNGSTSETSSPATKETSYGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 249

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BLAST of BolC1t00210H-R vs. GenBank_protein
Match: XP_018456588.1 (PREDICTED: thioredoxin-like protein HCF164, chloroplastic [Raphanus sativus] >XP_018456764.1 PREDICTED: thioredoxin-like protein HCF164, chloroplastic [Raphanus sativus])

HSP 1 Score: 436 bits (1120), Expect = 7.910e-153
Identity = 230/260 (88.46%), Postives = 235/260 (90.38%), Query Frame = 0

Query:    1 MAAARLVFSLSLPSSTH-GINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETSPATKEA--------SSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251
            M AA LVFSL + S+ H GINR FQPFLLTQT AP R RALRCQA  ESSEP+EKLVVDNGSTSE SPA+K A        SS FPESPN D+NRRVAV SVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG
Sbjct:    1 MMAAPLVFSLRILSTPHHGINRNFQPFLLTQTGAPPRYRALRCQANSESSEPKEKLVVDNGSTSEISPASKVAEPSPSSSSSSAFPESPNSDINRRVAVGSVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 260

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BLAST of BolC1t00210H-R vs. GenBank_protein
Match: KAF8098959.1 (hypothetical protein N665_0255s0035 [Sinapis alba])

HSP 1 Score: 433 bits (1114), Expect = 4.870e-152
Identity = 231/255 (90.59%), Postives = 236/255 (92.55%), Query Frame = 0

Query:    3 AARLVFSLS-LPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSETSP-----ATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251
            AARLVFSLS LPS   GINR +QPFLLTQT AP RVRALRCQA PESSEPQEKLVVDNGSTSE        ++  +SSGFPESPNRDVNRRVA ASV+AALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG
Sbjct:    2 AARLVFSLSSLPS---GINRNYQPFLLTQTGAP-RVRALRCQANPESSEPQEKLVVDNGSTSEIPKVAEPSSSSSSSSGFPESPNRDVNRRVAAASVIAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 252

[Close]

BLAST of BolC1t00210H-R vs. GenBank_protein
Match: XP_006411947.1 (thioredoxin-like protein HCF164, chloroplastic [Eutrema salsugineum] >ESQ53400.1 hypothetical protein EUTSA_v10026051mg [Eutrema salsugineum])

HSP 1 Score: 410 bits (1053), Expect = 1.030e-142
Identity = 217/255 (85.10%), Postives = 230/255 (90.20%), Query Frame = 0

Query:    4 ARLVFSLSLPSSTHGIN---RKFQPFLLTQTVAPSRVRALRCQATPESSEPQEKLVVDNGSTSET----SPATKEASSGFPESPNRDVNRRVAVASVVAALALFLSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGNVVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSHG 251
            ARLVFSL+L SS+HG N   RK+Q FLLTQT AP R RALRCQA PESSE QEKLVVD+ ST E     S     +SSGFPESPNRD+NRRVA  SV+AALALFLSTRLDFGISLKDLTA+ALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDR+GNEEGNVVGRLPRQYLVENVNALA+GK+SIP+ARAVGQYSSAE+RKVHQVTDPLSHG
Sbjct:    2 ARLVFSLNL-SSSHGFNLSPRKYQTFLLTQTGAP-RSRALRCQANPESSETQEKLVVDDSSTGEIKEVESSQASSSSSGFPESPNRDINRRVAATSVIAALALFLSTRLDFGISLKDLTAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLVENVNALASGKKSIPYARAVGQYSSAESRKVHQVTDPLSHG 254

The following BLAST results are available for this feature:

BLAST of BolC1t00210H-R vs. GenBank_protein

BLAST of BolC1t00210H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
CAF2067433.1	1.300e-174	100.00	unnamed protein product [Brassica napus] >VDD47821...	[more]
XP_013604880.1	7.520e-174	99.60	PREDICTED: thioredoxin-like protein HCF164, chloro...	[more]
XP_009140776.1	8.730e-171	98.02	thioredoxin-like protein HCF164, chloroplastic [Br...	[more]
XP_013738380.1	1.240e-170	98.41	thioredoxin-like protein HCF164, chloroplastic [Br...	[more]
XP_013732487.1	8.370e-169	97.62	thioredoxin-like protein HCF164, chloroplastic [Br...	[more]
KAF2543146.1	1.240e-167	97.62	hypothetical protein F2Q68_00028712 [Brassica cret...	[more]
KAF3530111.1	3.570e-167	97.62	hypothetical protein DY000_02036394 [Brassica cret...	[more]
XP_018456588.1	7.910e-153	88.46	PREDICTED: thioredoxin-like protein HCF164, chloro...	[more]
KAF8098959.1	4.870e-152	90.59	hypothetical protein N665_0255s0035 [Sinapis alba]	[more]
XP_006411947.1	1.030e-142	85.10	thioredoxin-like protein HCF164, chloroplastic [Eu...	[more]

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GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010190	cytochrome b6f complex assembly
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0031977	thylakoid lumen
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor

InterPro

Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 110..226 e-value: 3.1E-27 score: 96.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..80
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..12
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 19..251
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 13..18
None	No IPR available	CDD	cd02950	TxlA	coord: 109..250 e-value: 2.5866E-86 score: 251.102
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 121..215 e-value: 1.0E-20 score: 73.6
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 88..219 score: 14.851394
IPR044241	Thiol:disulfide interchange protein TxlA/HCF164	PANTHER	PTHR47353	THIOREDOXIN-LIKE PROTEIN HCF164, CHLOROPLASTIC	coord: 22..251
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 121..222

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C1	contig	C1:1142156..1143587 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Interproscan on OGS1.0	2022-03-19
Blast2go on OGS1.0	2022-03-19
Diamond on OGS1.0 vs NR	2022-03-19
Brassica oleracea HDEM OGS1.0	2018-11-02

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
BolC1t00210H-R	BolC1t00210H-R	Brassica oleracea HDEM	mRNA	C1 1142156..1143587 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>BolC1t00210H-R-P ID=BolC1t00210H-R-P|Name=BolC1t00210H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=252bp
MAAARLVFSLSLPSSTHGINRKFQPFLLTQTVAPSRVRALRCQATPESSE
PQEKLVVDNGSTSETSPATKEASSGFPESPNRDVNRRVAVASVVAALALF
LSTRLDFGISLKDLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDV
YKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDRQGNEEGN
VVGRLPRQYLVENVNALAAGKQSIPHARAVGQYSSAEARKVHQVTDPLSH
G.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR044241	TxlA/HCF164
IPR013766	Thioredoxin_domain

Vocabulary: **Biological Process**
Term	Definition
GO:0010190	cytochrome b6f complex assembly

Vocabulary: **Molecular Function**
Term	Definition
GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor

Vocabulary: **Cellular Component**
Term	Definition
GO:0031977	thylakoid lumen
GO:0009535	chloroplast thylakoid membrane

Orthology

View orthology data for BolC1t00210H-R-P