BolC1t00118H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	BolC1t00118H-R
Unique Name	BolC1t00118H-R-P
Type	polypeptide
Organism	Brassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length	243

Homology

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BLAST of BolC1t00118H-R vs. GenBank_protein
Match: XP_013669458.1 (dof zinc finger protein DOF4.7-like [Brassica napus] >VDD47729.1 unnamed protein product [Brassica oleracea])

HSP 1 Score: 491 bits (1263), Expect = 4.570e-175
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0

Query:    1 MMTSSHHSHTTSFNPRRIKTKAKPPHQISHMRPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVPIGGSTRNKNKPSSLQVISSPPPIVAPLSSHELVDGFRMNRAMIDPSSTAFQGGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQKDSPPVMFHNVELLPPSTATTEWAFDRSAIGEATSGSNENNGEREGNLGSWYYNPNNSMP 242
            MMTSSHHSHTTSFNPRRIKTKAKPPHQISHMRPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVPIGGSTRNKNKPSSLQVISSPPPIVAPLSSHELVDGFRMNRAMIDPSSTAFQGGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQKDSPPVMFHNVELLPPSTATTEWAFDRSAIGEATSGSNENNGEREGNLGSWYYNPNNSMP
Sbjct:    1 MMTSSHHSHTTSFNPRRIKTKAKPPHQISHMRPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVPIGGSTRNKNKPSSLQVISSPPPIVAPLSSHELVDGFRMNRAMIDPSSTAFQGGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQKDSPPVMFHNVELLPPSTATTEWAFDRSAIGEATSGSNENNGEREGNLGSWYYNPNNSMP 242

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BLAST of BolC1t00118H-R vs. GenBank_protein
Match: XP_013589609.1 (PREDICTED: dof zinc finger protein DOF4.7 [Brassica oleracea var. oleracea] >CAF2067287.1 unnamed protein product [Brassica napus])

HSP 1 Score: 484 bits (1245), Expect = 2.540e-172
Identity = 239/242 (98.76%), Postives = 240/242 (99.17%), Query Frame = 0

Query:    1 MMTSSHHSHTTSFNPRRIKTKAKPPHQISHMRPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVPIGGSTRNKNKPSSLQVISSPPPIVAPLSSHELVDGFRMNRAMIDPSSTAFQGGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQKDSPPVMFHNVELLPPSTATTEWAFDRSAIGEATSGSNENNGEREGNLGSWYYNPNNSMP 242
            MMTSSH SHTTSFNPRRIKTKAKPPHQISHMRPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVPIGGSTRNKNKPSSLQVISSPPPIVAPLSSHELVDGFRMNRAMIDPSSTAF GGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQ+DSPPVMFHNVELLPPSTATTEWAFDRSAIGEATSGSNENNGEREGNLGSWYYNPNNSMP
Sbjct:    1 MMTSSHQSHTTSFNPRRIKTKAKPPHQISHMRPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVPIGGSTRNKNKPSSLQVISSPPPIVAPLSSHELVDGFRMNRAMIDPSSTAFPGGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQQDSPPVMFHNVELLPPSTATTEWAFDRSAIGEATSGSNENNGEREGNLGSWYYNPNNSMP 242

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BLAST of BolC1t00118H-R vs. GenBank_protein
Match: KAG2240560.1 (hypothetical protein Bca52824_090702 [Brassica carinata])

HSP 1 Score: 481 bits (1238), Expect = 2.960e-171
Identity = 238/242 (98.35%), Postives = 239/242 (98.76%), Query Frame = 0

Query:    1 MMTSSHHSHTTSFNPRRIKTKAKPPHQISHMRPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVPIGGSTRNKNKPSSLQVISSPPPIVAPLSSHELVDGFRMNRAMIDPSSTAFQGGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQKDSPPVMFHNVELLPPSTATTEWAFDRSAIGEATSGSNENNGEREGNLGSWYYNPNNSMP 242
            MMTSSH SHTTSFNPRRIKTKAKPPHQISHMRPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVPIGGSTRNKNKPSSLQVISSPPPIVAPLSSHELVDGFRMNRAMIDPSSTAF GGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQ+DSPPVMFHNVELLPPSTATTEWAFDRSAIGEATSGSNENNGER GNLGSWYYNPNNSMP
Sbjct:    1 MMTSSHQSHTTSFNPRRIKTKAKPPHQISHMRPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVPIGGSTRNKNKPSSLQVISSPPPIVAPLSSHELVDGFRMNRAMIDPSSTAFPGGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQQDSPPVMFHNVELLPPSTATTEWAFDRSAIGEATSGSNENNGERGGNLGSWYYNPNNSMP 242

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BLAST of BolC1t00118H-R vs. GenBank_protein
Match: KAF3532541.1 (hypothetical protein DY000_02036272 [Brassica cretica])

HSP 1 Score: 466 bits (1198), Expect = 3.710e-165
Identity = 231/242 (95.45%), Postives = 234/242 (96.69%), Query Frame = 0

Query:    1 MMTSSHHSHTTSFNPRRIKTKAKPPHQISHMRPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVPIGGSTRNKNKPSSLQVISSPPPIVAPLSSHELVDGFRMNRAMIDPSSTAFQGGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQKDSPPVMFHNVELLPPSTATTEWAFDRSAIGEATSGSNENNGEREGNLGSWYYNPNNSMP 242
            MMTSSH SHTTSFNPRRIK KAKPPHQIS M PS AAQ VLKCPRCDS+NTKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVP+GGSTRNKNKPSSLQVISSPPPIVAPLSSHELVDGFRMNRAMIDP STAF GGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQ+DSPPVMFHNVELLPPSTATTEWAFDRSAIGEATSGSNENNGEREGNLGSWYYNPNNSMP
Sbjct:    1 MMTSSHQSHTTSFNPRRIKAKAKPPHQISRMGPSLAAQTVLKCPRCDSLNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVPVGGSTRNKNKPSSLQVISSPPPIVAPLSSHELVDGFRMNRAMIDPPSTAFPGGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQQDSPPVMFHNVELLPPSTATTEWAFDRSAIGEATSGSNENNGEREGNLGSWYYNPNNSMP 242

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BLAST of BolC1t00118H-R vs. GenBank_protein
Match: XP_009131626.1 (dof zinc finger protein DOF4.7 [Brassica rapa])

HSP 1 Score: 462 bits (1190), Expect = 6.160e-164
Identity = 230/242 (95.04%), Postives = 233/242 (96.28%), Query Frame = 0

Query:    1 MMTSSHHSHTTSFNPRRIKTKAKPPHQISHMRPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVPIGGSTRNKNKPSSLQVISSPPPIVAPLSSHELVDGFRMNRAMIDPSSTAFQGGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQKDSPPVMFHNVELLPPSTATTEWAFDRSAIGEATSGSNENNGEREGNLGSWYYNPNNSMP 242
            MMTSSH SHTTSFNPRRIK KAKPPHQIS M PSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGG+LRNVPIGGSTRNKNKPSSLQVISSPPPIVA LSSHELVDGFRMNRAMIDP +TAF GGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQ+DSPPVMFHNVELLPPSTATTEWAFDRSAI  ATSGSNENNGEREGNLGSWYYNPNNSMP
Sbjct:    1 MMTSSHQSHTTSFNPRRIKAKAKPPHQISRMGPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGSLRNVPIGGSTRNKNKPSSLQVISSPPPIVASLSSHELVDGFRMNRAMIDPPATAFPGGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQQDSPPVMFHNVELLPPSTATTEWAFDRSAIRGATSGSNENNGEREGNLGSWYYNPNNSMP 242

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BLAST of BolC1t00118H-R vs. GenBank_protein
Match: RID77176.1 (hypothetical protein BRARA_A00104 [Brassica rapa])

HSP 1 Score: 461 bits (1186), Expect = 2.510e-163
Identity = 229/242 (94.63%), Postives = 232/242 (95.87%), Query Frame = 0

Query:    1 MMTSSHHSHTTSFNPRRIKTKAKPPHQISHMRPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVPIGGSTRNKNKPSSLQVISSPPPIVAPLSSHELVDGFRMNRAMIDPSSTAFQGGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQKDSPPVMFHNVELLPPSTATTEWAFDRSAIGEATSGSNENNGEREGNLGSWYYNPNNSMP 242
            MMTSSH SHTTSFNPRRIK KAKPPHQIS M PSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGG+LRNVPIGGSTRNKNKPS LQVISSPPPIVA LSSHELVDGFRMNRAMIDP +TAF GGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQ+DSPPVMFHNVELLPPSTATTEWAFDRSAIG ATSGSNENNGEREGNL SWYYNPNNSMP
Sbjct:    1 MMTSSHQSHTTSFNPRRIKAKAKPPHQISRMGPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGSLRNVPIGGSTRNKNKPSGLQVISSPPPIVASLSSHELVDGFRMNRAMIDPPATAFAGGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQQDSPPVMFHNVELLPPSTATTEWAFDRSAIGGATSGSNENNGEREGNLESWYYNPNNSMP 242

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BLAST of BolC1t00118H-R vs. GenBank_protein
Match: XP_013732610.1 (dof zinc finger protein DOF4.7-like [Brassica napus] >XP_013736532.1 dof zinc finger protein DOF4.7-like [Brassica napus] >CAF2146344.1 unnamed protein product [Brassica napus])

HSP 1 Score: 460 bits (1184), Expect = 5.060e-163
Identity = 229/242 (94.63%), Postives = 232/242 (95.87%), Query Frame = 0

Query:    1 MMTSSHHSHTTSFNPRRIKTKAKPPHQISHMRPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVPIGGSTRNKNKPSSLQVISSPPPIVAPLSSHELVDGFRMNRAMIDPSSTAFQGGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQKDSPPVMFHNVELLPPSTATTEWAFDRSAIGEATSGSNENNGEREGNLGSWYYNPNNSMP 242
            MMTSSH SHTTSFNPRRIK KAKPPHQIS M PSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGG+LRNVPIGGSTRNKNKPSSLQVISSPPPIVA LSSHELVDGFRMNRAMIDP +TAF GGFSGYMFSLDP YNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQ+DSPPVMFHNVELLPPSTATTEWAFDRSAIG ATSGSNENNGEREGNL SWYYNPNNSMP
Sbjct:    1 MMTSSHQSHTTSFNPRRIKAKAKPPHQISRMGPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGSLRNVPIGGSTRNKNKPSSLQVISSPPPIVASLSSHELVDGFRMNRAMIDPPATAFPGGFSGYMFSLDPTYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQQDSPPVMFHNVELLPPSTATTEWAFDRSAIGGATSGSNENNGEREGNLESWYYNPNNSMP 242

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BLAST of BolC1t00118H-R vs. GenBank_protein
Match: VDC73604.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 459 bits (1181), Expect = 1.450e-162
Identity = 229/242 (94.63%), Postives = 232/242 (95.87%), Query Frame = 0

Query:    1 MMTSSHHSHTTSFNPRRIKTKAKPPHQISHMRPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVPIGGSTRNKNKPSSLQVISSPPPIVAPLSSHELVDGFRMNRAMIDPSSTAFQGGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQKDSPPVMFHNVELLPPSTATTEWAFDRSAIGEATSGSNENNGEREGNLGSWYYNPNNSMP 242
            MMTSSH SHTTSFNPRRIK KAKPPHQIS M PSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGG+LRNVPIGGSTRNKNKPSSLQVISSPPPIVA LSSHELVDGFRMNRAMIDP +TAF GGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQ+DSP VMFHNVELLPPSTATTEWAFDRSAI  ATSGSNENNGEREGNLGSWYYNPNNSMP
Sbjct:    1 MMTSSHQSHTTSFNPRRIKAKAKPPHQISRMGPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGSLRNVPIGGSTRNKNKPSSLQVISSPPPIVASLSSHELVDGFRMNRAMIDPPATAFPGGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQQDSPRVMFHNVELLPPSTATTEWAFDRSAIRGATSGSNENNGEREGNLGSWYYNPNNSMP 242

[Close]

BLAST of BolC1t00118H-R vs. GenBank_protein
Match: KAF2543636.1 (hypothetical protein F2Q68_00028624 [Brassica cretica] >KAF2584524.1 hypothetical protein F2Q70_00033746 [Brassica cretica])

HSP 1 Score: 432 bits (1111), Expect = 5.080e-152
Identity = 220/235 (93.62%), Postives = 222/235 (94.47%), Query Frame = 0

Query:    1 MMTSSHHSHTTSFNPRRIKTKAKPPHQISHMRPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVPIGGSTRNKNKPSSLQVISSPPPIVAPLSSHELVDGFRMNRAMIDPSSTAFQGGFSGYMFSLDP-NYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQKDSPPVMFHNVELLPPSTATTEWAFDRSAIGEATSGSNENNGEREGNLGSWY 234
            MMTSSH SHTTSFNPRRIK KAKPPHQISHMRPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVPIGGSTRNKNKPSSLQVISS P IVA LSSHELVDGFRMNRAM DP +TAF GGFS YMFSLDP NYNLASSSIESLSSLNQDLHQKLQQQRLFTSM Q+DSPPVMFHNVELLP STATTEWAFDRSAIG ATSGSNENNGEREGNLGSWY
Sbjct:    1 MMTSSHQSHTTSFNPRRIKAKAKPPHQISHMRPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVPIGGSTRNKNKPSSLQVISSTP-IVASLSSHELVDGFRMNRAMTDPPATAFPGGFSSYMFSLDPPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMLQQDSPPVMFHNVELLPASTATTEWAFDRSAIGGATSGSNENNGEREGNLGSWY 234

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BLAST of BolC1t00118H-R vs. GenBank_protein
Match: KAG5412534.1 (hypothetical protein IGI04_000101 [Brassica rapa subsp. trilocularis])

HSP 1 Score: 430 bits (1106), Expect = 2.940e-151
Identity = 214/227 (94.27%), Postives = 217/227 (95.59%), Query Frame = 0

Query:    1 MMTSSHHSHTTSFNPRRIKTKAKPPHQISHMRPSPAAQPVLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVPIGGSTRNKNKPSSLQVISSPPPIVAPLSSHELVDGFRMNRAMIDPSSTAFQGGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQKDSPPVMFHNVELLPPSTATTEWAFDRSAIGEATSGSNENNGERE 227
            MMTSSH SHTTSFNPRRIK KAKPPHQIS M PSPAAQPVLKCPRCDS NTKFCYYNNYSLSQPRHYCKNCRRYWTRGG+LRNVPIGGSTRNKNKPS LQVISSPPPIVA LSSHELVDGFRMNRAMIDP +TAF GGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQ+DSPPVMFHNVELLPPSTATTEWAFDRSAIG ATSGSNENNGERE
Sbjct:    1 MMTSSHQSHTTSFNPRRIKAKAKPPHQISRMGPSPAAQPVLKCPRCDSANTKFCYYNNYSLSQPRHYCKNCRRYWTRGGSLRNVPIGGSTRNKNKPSGLQVISSPPPIVASLSSHELVDGFRMNRAMIDPPATAFAGGFSGYMFSLDPNYNLASSSIESLSSLNQDLHQKLQQQRLFTSMFQQDSPPVMFHNVELLPPSTATTEWAFDRSAIGGATSGSNENNGERE 227

The following BLAST results are available for this feature:

BLAST of BolC1t00118H-R vs. GenBank_protein

BLAST of BolC1t00118H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
XP_013669458.1	4.570e-175	100.00	dof zinc finger protein DOF4.7-like [Brassica napu...	[more]
XP_013589609.1	2.540e-172	98.76	PREDICTED: dof zinc finger protein DOF4.7 [Brassic...	[more]
KAG2240560.1	2.960e-171	98.35	hypothetical protein Bca52824_090702 [Brassica car...	[more]
KAF3532541.1	3.710e-165	95.45	hypothetical protein DY000_02036272 [Brassica cret...	[more]
XP_009131626.1	6.160e-164	95.04	dof zinc finger protein DOF4.7 [Brassica rapa]	[more]
RID77176.1	2.510e-163	94.63	hypothetical protein BRARA_A00104 [Brassica rapa]	[more]
XP_013732610.1	5.060e-163	94.63	dof zinc finger protein DOF4.7-like [Brassica napu...	[more]
VDC73604.1	1.450e-162	94.63	unnamed protein product [Brassica rapa]	[more]
KAF2543636.1	5.080e-152	93.62	hypothetical protein F2Q68_00028624 [Brassica cret...	[more]
KAG5412534.1	2.940e-151	94.27	hypothetical protein IGI04_000101 [Brassica rapa s...	[more]

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GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010227	floral organ abscission
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 40..95 e-value: 7.5E-32 score: 109.3
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 43..79
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 41..95 score: 28.145748
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..26
None	No IPR available	PANTHER	PTHR31992:SF149	DOF ZINC FINGER PROTEIN DOF4.7	coord: 1..242
IPR045174	Dof zinc finger protein	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 1..242

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C1	contig	C1:563813..564541 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Interproscan on OGS1.0	2022-03-19
Blast2go on OGS1.0	2022-03-19
Diamond on OGS1.0 vs NR	2022-03-19
Brassica oleracea HDEM OGS1.0	2018-11-02

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
BolC1t00118H-R	BolC1t00118H-R	Brassica oleracea HDEM	mRNA	C1 563813..564541 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>BolC1t00118H-R-P ID=BolC1t00118H-R-P|Name=BolC1t00118H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=243bp
MMTSSHHSHTTSFNPRRIKTKAKPPHQISHMRPSPAAQPVLKCPRCDSVN
TKFCYYNNYSLSQPRHYCKNCRRYWTRGGTLRNVPIGGSTRNKNKPSSLQ
VISSPPPIVAPLSSHELVDGFRMNRAMIDPSSTAFQGGFSGYMFSLDPNY
NLASSSIESLSSLNQDLHQKLQQQRLFTSMFQKDSPPVMFHNVELLPPST
ATTEWAFDRSAIGEATSGSNENNGEREGNLGSWYYNPNNSMP.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated
GO:0010227	floral organ abscission
GO:0045893	positive regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR045174	Dof
IPR003851	Znf_Dof

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding
GO:0005515	protein binding
GO:0003700	DNA-binding transcription factor activity
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Orthology

View orthology data for BolC1t00118H-R-P