BolSC55t61223H-R-P (polypeptide) Brassica oleracea HDEM
Overview
Homology
BLAST of BolSC55t61223H-R vs. GenBank_protein
Match: VDD65995.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 400 bits (1027), Expect = 1.590e-139 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0 Query: 1 MSSTSLVLTLASPLFSRRPVSARVALKKNTTTTEPSVKFRRRCSGKEEVLLEGMPPEYYDDEWQARQREXXXXXXXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPRKTLQHSNATRFRH 229 MSSTSLVLTLASPLFSRRPVSARVALKKNTTTTEPSVKFRRRCSGKEEVLLEGMPPEYYDDEWQARQREXXXXXXXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPRKTLQHSNATRFRH Sbjct: 1 MSSTSLVLTLASPLFSRRPVSARVALKKNTTTTEPSVKFRRRCSGKEEVLLEGMPPEYYDDEWQARQREXXXXXXXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPRKTLQHSNATRFRH 229
BLAST of BolSC55t61223H-R vs. GenBank_protein
Match: KAG2290662.1 (hypothetical protein Bca52824_050266 [Brassica carinata]) HSP 1 Score: 357 bits (916), Expect = 1.660e-121 Identity = 206/227 (90.75%), Postives = 208/227 (91.63%), Query Frame = 0 Query: 1 MSSTSLVLTLASPLFSRRPVSARVALKKNTTTTEPSVKFRRRCSGKEEVLLEGMPPEYYDDEWQARQREXXXXXXXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPRKTLQHSNATRF 227 M+STSLVLT+A PLFS ALKK T TTEPSVKFRRRCSGKEEVLLEGMPPEYYDDEWQARQRE XXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETF KTLQHSNAT F Sbjct: 1 MASTSLVLTIAPPLFSS-------ALKKKTMTTEPSVKFRRRCSGKEEVLLEGMPPEYYDDEWQARQREKTKELXXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFHGKTLQHSNATGF 220
BLAST of BolSC55t61223H-R vs. GenBank_protein
Match: XP_033147147.1 (protein PALE CRESS, chloroplastic isoform X2 [Brassica rapa]) HSP 1 Score: 352 bits (903), Expect = 1.860e-119 Identity = 202/217 (93.09%), Postives = 204/217 (94.01%), Query Frame = 0 Query: 1 MSSTSLVLTLASPLFSRRPVSARVALKKNTTTTEPSVKFRRRCSGKEEVLLEGMPPEYYDDEWQARQREXXXXXXXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPRK 217 M+STSLVLTLA PLFSRRP SARVALKK T EPSVK RRRCSGKEEVLLEGMPPEYYDDEWQARQRE XXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPR+ Sbjct: 1 MASTSLVLTLAPPLFSRRPDSARVALKKKT---EPSVKLRRRCSGKEEVLLEGMPPEYYDDEWQARQREKTKELRXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPRE 214
BLAST of BolSC55t61223H-R vs. GenBank_protein
Match: CAF2093096.1 (unnamed protein product, partial [Brassica napus]) HSP 1 Score: 350 bits (899), Expect = 6.160e-119 Identity = 201/217 (92.63%), Postives = 204/217 (94.01%), Query Frame = 0 Query: 1 MSSTSLVLTLASPLFSRRPVSARVALKKNTTTTEPSVKFRRRCSGKEEVLLEGMPPEYYDDEWQARQREXXXXXXXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPRK 217 M+STSLVLTLA PLFSRRP SARVALKK T + PSVK RRRCSGKEEVLLEGMPPEYYDDEWQARQRE XXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPR+ Sbjct: 1 MASTSLVLTLAPPLFSRRPDSARVALKKKTEPS-PSVKLRRRCSGKEEVLLEGMPPEYYDDEWQARQREKTKELRXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPRE 216
BLAST of BolSC55t61223H-R vs. GenBank_protein
Match: XP_009142474.1 (protein PALE CRESS, chloroplastic isoform X1 [Brassica rapa] >XP_022574689.1 protein PALE CRESS, chloroplastic-like isoform X2 [Brassica napus] >RID60834.1 hypothetical protein BRARA_E00029 [Brassica rapa] >VDC69283.1 unnamed protein product [Brassica rapa]) HSP 1 Score: 350 bits (899), Expect = 8.100e-119 Identity = 201/217 (92.63%), Postives = 204/217 (94.01%), Query Frame = 0 Query: 1 MSSTSLVLTLASPLFSRRPVSARVALKKNTTTTEPSVKFRRRCSGKEEVLLEGMPPEYYDDEWQARQREXXXXXXXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPRK 217 M+STSLVLTLA PLFSRRP SARVALKK T + PSVK RRRCSGKEEVLLEGMPPEYYDDEWQARQRE XXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPR+ Sbjct: 1 MASTSLVLTLAPPLFSRRPDSARVALKKKTEPS-PSVKLRRRCSGKEEVLLEGMPPEYYDDEWQARQREKTKELRXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPRE 216
BLAST of BolSC55t61223H-R vs. GenBank_protein
Match: KAF8074362.1 (hypothetical protein N665_1107s0003 [Sinapis alba]) HSP 1 Score: 348 bits (892), Expect = 1.080e-117 Identity = 195/217 (89.86%), Postives = 199/217 (91.71%), Query Frame = 0 Query: 1 MSSTSLVLTLASPLFSRRPVSARVALKKNTTTTEPSVKFRRRCSGKEEVLLEGMPPEYYDDEWQARQREXXXXXXXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPRK 217 M+STSL+LTLAS LFSR PVSARVALKK T T PSVK+ RRCSGKEEVLLEGMPPEYYDDEWQARQRE XXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFI AAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETE LKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRM ETFPR+ Sbjct: 1 MASTSLLLTLASSLFSRGPVSARVALKKKTMITNPSVKYTRRCSGKEEVLLEGMPPEYYDDEWQARQREKTKELRRMXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFIRAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEFLKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMTETFPRE 217
BLAST of BolSC55t61223H-R vs. GenBank_protein
Match: VDD65991.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 344 bits (882), Expect = 1.190e-117 Identity = 198/217 (91.24%), Postives = 201/217 (92.63%), Query Frame = 0 Query: 1 MSSTSLVLTLASPLFSRRPVSARVALKKNTTTTEPSVKFRRRCSGKEEVLLEGMPPEYYDDEWQARQREXXXXXXXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPRK 217 M+STSLVLT+A PLFS ALKK T TTEPSVKFRRRCSGKEEVLLEGMPPEYYDDEWQARQRE XXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPR+ Sbjct: 1 MASTSLVLTIAPPLFSS-------ALKKKTMTTEPSVKFRRRCSGKEEVLLEGMPPEYYDDEWQARQREKTKELXXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPRE 210
BLAST of BolSC55t61223H-R vs. GenBank_protein
Match: XP_013635856.1 (PREDICTED: protein PALE CRESS, chloroplastic [Brassica oleracea var. oleracea] >XP_013690385.1 protein PALE CRESS, chloroplastic isoform X2 [Brassica napus] >CDY65703.1 BnaCnng48330D [Brassica napus]) HSP 1 Score: 344 bits (882), Expect = 2.530e-116 Identity = 198/217 (91.24%), Postives = 201/217 (92.63%), Query Frame = 0 Query: 1 MSSTSLVLTLASPLFSRRPVSARVALKKNTTTTEPSVKFRRRCSGKEEVLLEGMPPEYYDDEWQARQREXXXXXXXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPRK 217 M+STSLVLT+A PLFS ALKK T TTEPSVKFRRRCSGKEEVLLEGMPPEYYDDEWQARQRE XXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPR+ Sbjct: 1 MASTSLVLTIAPPLFSS-------ALKKKTMTTEPSVKFRRRCSGKEEVLLEGMPPEYYDDEWQARQREKTKELXXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPRE 210
BLAST of BolSC55t61223H-R vs. GenBank_protein
Match: XP_013731157.1 (protein PALE CRESS, chloroplastic [Brassica napus]) HSP 1 Score: 344 bits (882), Expect = 2.530e-116 Identity = 192/217 (88.48%), Postives = 195/217 (89.86%), Query Frame = 0 Query: 1 MSSTSLVLTLASPLFSRRPVSARVALKKNTTTTEPSVKFRRRCSGKEEVLLEGMPPEYYDDEWQARQREXXXXXXXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPRK 217 M+STSLVLT+A PLFS ALKK T TTEPSVKFRRRCSGKEEVLLEGMPPEYYDDEWQARQRE XXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPR+ Sbjct: 1 MASTSLVLTIAPPLFSS-------ALKKKTMTTEPSVKFRRRCSGKEEVLLEGMPPEYYDDEWQARQREKTKELRWMQREXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPRE 210
BLAST of BolSC55t61223H-R vs. GenBank_protein
Match: KAG2326010.1 (hypothetical protein Bca52824_008738 [Brassica carinata]) HSP 1 Score: 341 bits (875), Expect = 3.040e-115 Identity = 195/217 (89.86%), Postives = 201/217 (92.63%), Query Frame = 0 Query: 1 MSSTSLVLTLASPLFSRRPVSARVALKKNTTTTEPSVKFRRRCSGKEEVLLEGMPPEYYDDEWQARQREXXXXXXXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMAETFPRK 217 M+STSLVLTLASPLFSR + KK T +TEPSVKF+RRCSGKEEVLLEGMPPEYYDDEWQARQRE XXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMA+TFPR+ Sbjct: 1 MASTSLVLTLASPLFSRV-----ASKKKKTMSTEPSVKFKRRCSGKEEVLLEGMPPEYYDDEWQARQREKTKELRXXXXXXXXXXXRKIEEYREIGLRLKEFPEEDLRKARKLVSSFITAAEEVEERIEEAAEKGELDELVLMIIWNRLDLARRDDEKDAIRSLDLLYRRVETEILKRQASPAMKLLNDLLNMHDGFGDDAWLKDCRKRMADTFPRE 212 The following BLAST results are available for this feature:
BLAST of BolSC55t61223H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR) Total hits: 20
Pagesback to topGO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BolSC55t61223H-R-P ID=BolSC55t61223H-R-P|Name=BolSC55t61223H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=230bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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