BolSC47t61099H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameBolSC47t61099H-R
Unique NameBolSC47t61099H-R-P
Typepolypeptide
OrganismBrassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length441
Homology
BLAST of BolSC47t61099H-R vs. GenBank_protein
Match: VDD65871.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 883 bits (2282), Expect = 0.000e+0
Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = 0
Query:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVIPCFFFL 440
            MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVIPCFFFL
Sbjct:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVIPCFFFL 440          
BLAST of BolSC47t61099H-R vs. GenBank_protein
Match: YP_009564584.1 (acetyl-CoA carboxylase beta subunit [Brassica oleracea] >AKM97927.1 AccD [Brassica oleracea var. capitata] >ANW83804.1 AccD [Brassica napus var. napus] >ASY94067.1 AccD [Brassica oleracea var. botrytis] >ASY94154.1 AccD [Brassica oleracea var. gongylodes] >ASY94241.1 AccD [Brassica oleracea var. italica])

HSP 1 Score: 870 bits (2247), Expect = 0.000e+0
Identity = 434/434 (100.00%), Postives = 434/434 (100.00%), Query Frame = 0
Query:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434
            MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI
Sbjct:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434          
BLAST of BolSC47t61099H-R vs. GenBank_protein
Match: ABZ10596.1 (ACCase beta-CT subunit [Brassica oleracea])

HSP 1 Score: 868 bits (2243), Expect = 0.000e+0
Identity = 433/434 (99.77%), Postives = 433/434 (99.77%), Query Frame = 0
Query:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434
            MEKSWFNLMFSKGELEYRGELSKAMD FAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI
Sbjct:    1 MEKSWFNLMFSKGELEYRGELSKAMDGFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434          
BLAST of BolSC47t61099H-R vs. GenBank_protein
Match: YP_005089961.1 (accD gene product [Brassica napus] >ANW83286.1 AccD [Brassica napus var. napus] >ACY66222.1 acetyl-CoA carboxylase beta subunit [Brassica napus] >AEQ19133.1 acetyl CoA carboxylase carboxyltransferase beta subunit [Brassica napus] >AKD00098.1 acetyl-CoA carboxylase beta subunit [Brassica napus] >ANW83458.1 AccD [Brassica napus var. napus])

HSP 1 Score: 859 bits (2219), Expect = 2.710e-313
Identity = 430/434 (99.08%), Postives = 431/434 (99.31%), Query Frame = 0
Query:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434
            MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLE FFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSID GTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQ LPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKK+FYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI
Sbjct:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLEIFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDPGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQCLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKLFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434          
BLAST of BolSC47t61099H-R vs. GenBank_protein
Match: AEQ19135.1 (acetyl CoA carboxylase carboxyltransferase beta subunit [Brassica napus] >AIK29013.1 acetyl-CoA carboxylase beta subunit [Brassica napus] >AIZ06089.1 acetyl-CoA carboxylase beta subunit [Brassica napus] >ASY93632.1 AccD [Brassica rapa subsp. rapa])

HSP 1 Score: 856 bits (2211), Expect = 4.480e-312
Identity = 429/434 (98.85%), Postives = 430/434 (99.08%), Query Frame = 0
Query:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434
            MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLE FFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSK FDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSID GTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQ LPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKK+FYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI
Sbjct:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLEIFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKAFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDPGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQCLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKLFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434          
BLAST of BolSC47t61099H-R vs. GenBank_protein
Match: YP_009177874.1 (acetyl-CoA carboxylase carboxyltransferase beta subunit [Brassica juncea] >YP_009553776.1 acetyl-CoA carboxylase beta subunit [Brassica rapa] >YP_009907370.1 AccD [Brassica rapa subsp. rapa] >AEQ19136.1 acetyl CoA carboxylase carboxyltransferase beta subunit [Brassica napus] >ANW83373.1 AccD [Brassica napus var. napus] >ASY93458.1 AccD [Brassica rapa subsp. chinensis] >ASY93545.1 AccD [Brassica rapa subsp. pekinensis] >ASY94676.1 AccD [Brassica juncea subsp. integrifolia])

HSP 1 Score: 848 bits (2190), Expect = 6.590e-309
Identity = 427/434 (98.39%), Postives = 428/434 (98.62%), Query Frame = 0
Query:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434
            MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLE FFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICS  GSGKIRESKNDKIRTNSNRNNLMSSK FDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSID GTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQ LPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKK+FYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI
Sbjct:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLEIFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICS--GSGKIRESKNDKIRTNSNRNNLMSSKAFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDPGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQCLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKLFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 432          
BLAST of BolSC47t61099H-R vs. GenBank_protein
Match: AEO92132.1 (carboxyltransferase beta subunit [Brassica rapa])

HSP 1 Score: 847 bits (2189), Expect = 9.350e-309
Identity = 426/434 (98.16%), Postives = 428/434 (98.62%), Query Frame = 0
Query:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434
            MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLE FFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICS  GSGKIRESKNDKIRTNSNRNNLMSSK FDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSID GTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQ LPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKK+FYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRV+
Sbjct:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLEIFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICS--GSGKIRESKNDKIRTNSNRNNLMSSKAFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDPGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQCLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKLFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVV 432          
BLAST of BolSC47t61099H-R vs. GenBank_protein
Match: ABZ10595.1 (ACCase beta-CT subunit [Brassica juncea])

HSP 1 Score: 847 bits (2188), Expect = 1.330e-308
Identity = 425/434 (97.93%), Postives = 428/434 (98.62%), Query Frame = 0
Query:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434
            MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLE FFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICS  GSGKIRESKNDKIRTNSNRNNLMSSK FDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSID GTWNPMDEDM+SADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQ LPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKK+FYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRV+
Sbjct:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLEIFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICS--GSGKIRESKNDKIRTNSNRNNLMSSKAFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDPGTWNPMDEDMISADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQCLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKLFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVV 432          
BLAST of BolSC47t61099H-R vs. GenBank_protein
Match: CAA90747.1 (acetyl CoA carboxylase carboxyltransferase (beta subunit) [Brassica napus] >prf||2210244G Ac-CoA carboxylase:SUBUNIT=beta [Brassica napus])

HSP 1 Score: 847 bits (2187), Expect = 2.030e-308
Identity = 424/434 (97.70%), Postives = 428/434 (98.62%), Query Frame = 0
Query:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434
            MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDI+KKKFEINNDLSDLE FFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGL YKKVEMNVCEECGHYLKMTSSERIELSID G+WN MDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVG+KITRLIEYATNQ LPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKK+FYISILTSPTTGGVTAS GMLGDIIIAEPYAYIAFAGKRVI
Sbjct:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIEKKKFEINNDLSDLEIFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLKYKKVEMNVCEECGHYLKMTSSERIELSIDPGSWNGMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGDKITRLIEYATNQCLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKLFYISILTSPTTGGVTASLGMLGDIIIAEPYAYIAFAGKRVI 434          
BLAST of BolSC47t61099H-R vs. GenBank_protein
Match: P48937.2 (RecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic; Short=ACCase subunit beta; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta [Brassica napus])

HSP 1 Score: 844 bits (2181), Expect = 1.670e-307
Identity = 423/434 (97.47%), Postives = 427/434 (98.39%), Query Frame = 0
Query:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434
            MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDI+KKKFEINNDLSDLE FFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGL YKKVEMNVCEECGHYLKMTSSERIEL ID G+WN MDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVG+KITRLIEYATNQ LPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKK+FYISILTSPTTGGVTAS GMLGDIIIAEPYAYIAFAGKRVI
Sbjct:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIEKKKFEINNDLSDLEIFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLKYKKVEMNVCEECGHYLKMTSSERIELLIDPGSWNGMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGDKITRLIEYATNQCLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKLFYISILTSPTTGGVTASLGMLGDIIIAEPYAYIAFAGKRVI 434          
The following BLAST results are available for this feature:
BLAST of BolSC47t61099H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20
Match NameE-valueIdentityDescription
VDD65871.10.000e+0100.00unnamed protein product [Brassica oleracea][more]
YP_009564584.10.000e+0100.00acetyl-CoA carboxylase beta subunit [Brassica oler... [more]
ABZ10596.10.000e+099.77ACCase beta-CT subunit [Brassica oleracea][more]
YP_005089961.12.710e-31399.08accD gene product [Brassica napus] >ANW83286.1 Acc... [more]
AEQ19135.14.480e-31298.85acetyl CoA carboxylase carboxyltransferase beta su... [more]
YP_009177874.16.590e-30998.39acetyl-CoA carboxylase carboxyltransferase beta su... [more]
AEO92132.19.350e-30998.16carboxyltransferase beta subunit [Brassica rapa][more]
ABZ10595.11.330e-30897.93ACCase beta-CT subunit [Brassica juncea][more]
CAA90747.12.030e-30897.70acetyl CoA carboxylase carboxyltransferase (beta s... [more]
P48937.21.670e-30797.47RecName: Full=Acetyl-coenzyme A carboxylase carbox... [more]

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GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:2001295 malonyl-CoA biosynthetic process
cellular_component GO:0009317 acetyl-CoA carboxylase complex
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0003989 acetyl-CoA carboxylase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016743 carboxyl- or carbamoyltransferase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000438Acetyl-CoA carboxylase carboxyl transferase, beta subunitPRINTSPR01070ACCCTRFRASEBcoord: 428..439
score: 52.54
coord: 361..379
score: 88.1
coord: 327..341
score: 88.41
coord: 399..416
score: 89.13
IPR034733Acetyl-CoA carboxylasePFAMPF01039Carboxyl_transcoord: 282..434
e-value: 3.6E-18
score: 65.5
NoneNo IPR availableGENE3D3.90.226.10coord: 225..436
e-value: 9.0E-74
score: 250.2
NoneNo IPR availablePANTHERPTHR42995FAMILY NOT NAMEDcoord: 219..434
coord: 60..185
IPR011762Acetyl-coenzyme A carboxyltransferase, N-terminalPROSITEPS50980COA_CT_NTERcoord: 225..440
score: 80.382431
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 225..434

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Boleracea_scaffold_47contigBoleracea_scaffold_47:112579..113901 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Interproscan on OGS1.02022-03-19
Blast2go on OGS1.02022-03-19
Diamond on OGS1.0 vs NR2022-03-19
Brassica oleracea HDEM OGS1.02018-11-02
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
BolSC47t61099H-RBolSC47t61099H-RBrassica oleracea HDEMmRNABoleracea_scaffold_47 112579..113901 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>BolSC47t61099H-R-P ID=BolSC47t61099H-R-P|Name=BolSC47t61099H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=441bp
MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFY
GWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKK
FEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHI
NSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDK
IRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGH
YLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQK
KTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYAT
NQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILT
SPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVIPCFFFL.
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029045ClpP/crotonase-like_dom_sf
IPR011762COA_CT_N
IPR034733AcCoA_carboxyl
IPR000438Acetyl_CoA_COase_Trfase_b_su
Vocabulary: Biological Process
TermDefinition
GO:2001295malonyl-CoA biosynthetic process
GO:0006633fatty acid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016743carboxyl- or carbamoyltransferase activity
GO:0008270zinc ion binding
GO:0005524ATP binding
GO:0003989acetyl-CoA carboxylase activity
Vocabulary: Cellular Component
TermDefinition
GO:0009570chloroplast stroma
GO:0009317acetyl-CoA carboxylase complex