BolSC47t61099H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	BolSC47t61099H-R
Unique Name	BolSC47t61099H-R-P
Type	polypeptide
Organism	Brassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length	441

Homology

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BLAST of BolSC47t61099H-R vs. GenBank_protein
Match: VDD65871.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 883 bits (2282), Expect = 0.000e+0
Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = 0

Query:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVIPCFFFL 440
            MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVIPCFFFL
Sbjct:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVIPCFFFL 440

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BLAST of BolSC47t61099H-R vs. GenBank_protein
Match: YP_009564584.1 (acetyl-CoA carboxylase beta subunit [Brassica oleracea] >AKM97927.1 AccD [Brassica oleracea var. capitata] >ANW83804.1 AccD [Brassica napus var. napus] >ASY94067.1 AccD [Brassica oleracea var. botrytis] >ASY94154.1 AccD [Brassica oleracea var. gongylodes] >ASY94241.1 AccD [Brassica oleracea var. italica])

HSP 1 Score: 870 bits (2247), Expect = 0.000e+0
Identity = 434/434 (100.00%), Postives = 434/434 (100.00%), Query Frame = 0

Query:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434
            MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI
Sbjct:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434

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BLAST of BolSC47t61099H-R vs. GenBank_protein
Match: ABZ10596.1 (ACCase beta-CT subunit [Brassica oleracea])

HSP 1 Score: 868 bits (2243), Expect = 0.000e+0
Identity = 433/434 (99.77%), Postives = 433/434 (99.77%), Query Frame = 0

Query:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434
            MEKSWFNLMFSKGELEYRGELSKAMD FAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI
Sbjct:    1 MEKSWFNLMFSKGELEYRGELSKAMDGFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434

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BLAST of BolSC47t61099H-R vs. GenBank_protein
Match: YP_005089961.1 (accD gene product [Brassica napus] >ANW83286.1 AccD [Brassica napus var. napus] >ACY66222.1 acetyl-CoA carboxylase beta subunit [Brassica napus] >AEQ19133.1 acetyl CoA carboxylase carboxyltransferase beta subunit [Brassica napus] >AKD00098.1 acetyl-CoA carboxylase beta subunit [Brassica napus] >ANW83458.1 AccD [Brassica napus var. napus])

HSP 1 Score: 859 bits (2219), Expect = 2.710e-313
Identity = 430/434 (99.08%), Postives = 431/434 (99.31%), Query Frame = 0

Query:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434
            MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLE FFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSID GTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQ LPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKK+FYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI
Sbjct:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLEIFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDPGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQCLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKLFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434

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BLAST of BolSC47t61099H-R vs. GenBank_protein
Match: AEQ19135.1 (acetyl CoA carboxylase carboxyltransferase beta subunit [Brassica napus] >AIK29013.1 acetyl-CoA carboxylase beta subunit [Brassica napus] >AIZ06089.1 acetyl-CoA carboxylase beta subunit [Brassica napus] >ASY93632.1 AccD [Brassica rapa subsp. rapa])

HSP 1 Score: 856 bits (2211), Expect = 4.480e-312
Identity = 429/434 (98.85%), Postives = 430/434 (99.08%), Query Frame = 0

Query:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434
            MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLE FFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSK FDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSID GTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQ LPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKK+FYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI
Sbjct:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLEIFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKAFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDPGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQCLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKLFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434

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BLAST of BolSC47t61099H-R vs. GenBank_protein
Match: YP_009177874.1 (acetyl-CoA carboxylase carboxyltransferase beta subunit [Brassica juncea] >YP_009553776.1 acetyl-CoA carboxylase beta subunit [Brassica rapa] >YP_009907370.1 AccD [Brassica rapa subsp. rapa] >AEQ19136.1 acetyl CoA carboxylase carboxyltransferase beta subunit [Brassica napus] >ANW83373.1 AccD [Brassica napus var. napus] >ASY93458.1 AccD [Brassica rapa subsp. chinensis] >ASY93545.1 AccD [Brassica rapa subsp. pekinensis] >ASY94676.1 AccD [Brassica juncea subsp. integrifolia])

HSP 1 Score: 848 bits (2190), Expect = 6.590e-309
Identity = 427/434 (98.39%), Postives = 428/434 (98.62%), Query Frame = 0

Query:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434
            MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLE FFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICS  GSGKIRESKNDKIRTNSNRNNLMSSK FDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSID GTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQ LPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKK+FYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI
Sbjct:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLEIFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICS--GSGKIRESKNDKIRTNSNRNNLMSSKAFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDPGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQCLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKLFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 432

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BLAST of BolSC47t61099H-R vs. GenBank_protein
Match: AEO92132.1 (carboxyltransferase beta subunit [Brassica rapa])

HSP 1 Score: 847 bits (2189), Expect = 9.350e-309
Identity = 426/434 (98.16%), Postives = 428/434 (98.62%), Query Frame = 0

Query:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434
            MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLE FFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICS  GSGKIRESKNDKIRTNSNRNNLMSSK FDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSID GTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQ LPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKK+FYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRV+
Sbjct:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLEIFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICS--GSGKIRESKNDKIRTNSNRNNLMSSKAFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDPGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQCLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKLFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVV 432

[Close]

BLAST of BolSC47t61099H-R vs. GenBank_protein
Match: ABZ10595.1 (ACCase beta-CT subunit [Brassica juncea])

HSP 1 Score: 847 bits (2188), Expect = 1.330e-308
Identity = 425/434 (97.93%), Postives = 428/434 (98.62%), Query Frame = 0

Query:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434
            MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLE FFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICS  GSGKIRESKNDKIRTNSNRNNLMSSK FDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSID GTWNPMDEDM+SADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQ LPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKK+FYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRV+
Sbjct:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLEIFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICS--GSGKIRESKNDKIRTNSNRNNLMSSKAFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDPGTWNPMDEDMISADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQCLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKLFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVV 432

[Close]

BLAST of BolSC47t61099H-R vs. GenBank_protein
Match: CAA90747.1 (acetyl CoA carboxylase carboxyltransferase (beta subunit) [Brassica napus] >prf||2210244G Ac-CoA carboxylase:SUBUNIT=beta [Brassica napus])

HSP 1 Score: 847 bits (2187), Expect = 2.030e-308
Identity = 424/434 (97.70%), Postives = 428/434 (98.62%), Query Frame = 0

Query:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434
            MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDI+KKKFEINNDLSDLE FFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGL YKKVEMNVCEECGHYLKMTSSERIELSID G+WN MDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVG+KITRLIEYATNQ LPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKK+FYISILTSPTTGGVTAS GMLGDIIIAEPYAYIAFAGKRVI
Sbjct:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIEKKKFEINNDLSDLEIFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLKYKKVEMNVCEECGHYLKMTSSERIELSIDPGSWNGMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGDKITRLIEYATNQCLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKLFYISILTSPTTGGVTASLGMLGDIIIAEPYAYIAFAGKRVI 434

[Close]

BLAST of BolSC47t61099H-R vs. GenBank_protein
Match: P48937.2 (RecName: Full=Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic; Short=ACCase subunit beta; Short=Acetyl-CoA carboxylase carboxyltransferase subunit beta [Brassica napus])

HSP 1 Score: 844 bits (2181), Expect = 1.670e-307
Identity = 423/434 (97.47%), Postives = 427/434 (98.39%), Query Frame = 0

Query:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKKFEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGHYLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYATNQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVI 434
            MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDI+KKKFEINNDLSDLE FFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGL YKKVEMNVCEECGHYLKMTSSERIEL ID G+WN MDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVG+KITRLIEYATNQ LPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKK+FYISILTSPTTGGVTAS GMLGDIIIAEPYAYIAFAGKRVI
Sbjct:    1 MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFYGWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIEKKKFEINNDLSDLEIFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHINSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDKIRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLKYKKVEMNVCEECGHYLKMTSSERIELLIDPGSWNGMDEDMVSADPIKFHSREEPYKKRIASAQKKTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGDKITRLIEYATNQCLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKLFYISILTSPTTGGVTASLGMLGDIIIAEPYAYIAFAGKRVI 434

The following BLAST results are available for this feature:

BLAST of BolSC47t61099H-R vs. GenBank_protein

BLAST of BolSC47t61099H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
VDD65871.1	0.000e+0	100.00	unnamed protein product [Brassica oleracea]	[more]
YP_009564584.1	0.000e+0	100.00	acetyl-CoA carboxylase beta subunit [Brassica oler...	[more]
ABZ10596.1	0.000e+0	99.77	ACCase beta-CT subunit [Brassica oleracea]	[more]
YP_005089961.1	2.710e-313	99.08	accD gene product [Brassica napus] >ANW83286.1 Acc...	[more]
AEQ19135.1	4.480e-312	98.85	acetyl CoA carboxylase carboxyltransferase beta su...	[more]
YP_009177874.1	6.590e-309	98.39	acetyl-CoA carboxylase carboxyltransferase beta su...	[more]
AEO92132.1	9.350e-309	98.16	carboxyltransferase beta subunit [Brassica rapa]	[more]
ABZ10595.1	1.330e-308	97.93	ACCase beta-CT subunit [Brassica juncea]	[more]
CAA90747.1	2.030e-308	97.70	acetyl CoA carboxylase carboxyltransferase (beta s...	[more]
P48937.2	1.670e-307	97.47	RecName: Full=Acetyl-coenzyme A carboxylase carbox...	[more]

Pages

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:2001295	malonyl-CoA biosynthetic process
cellular_component	GO:0009317	acetyl-CoA carboxylase complex
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0003989	acetyl-CoA carboxylase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016743	carboxyl- or carbamoyltransferase activity
molecular_function	GO:0008270	zinc ion binding

InterPro

Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000438	Acetyl-CoA carboxylase carboxyl transferase, beta subunit	PRINTS	PR01070	ACCCTRFRASEB	coord: 428..439 score: 52.54 coord: 361..379 score: 88.1 coord: 327..341 score: 88.41 coord: 399..416 score: 89.13
IPR034733	Acetyl-CoA carboxylase	PFAM	PF01039	Carboxyl_trans	coord: 282..434 e-value: 3.6E-18 score: 65.5
None	No IPR available	GENE3D	3.90.226.10		coord: 225..436 e-value: 9.0E-74 score: 250.2
None	No IPR available	PANTHER	PTHR42995	FAMILY NOT NAMED	coord: 219..434 coord: 60..185
IPR011762	Acetyl-coenzyme A carboxyltransferase, N-terminal	PROSITE	PS50980	COA_CT_NTER	coord: 225..440 score: 80.382431
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 225..434

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Boleracea_scaffold_47	contig	Boleracea_scaffold_47:112579..113901 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Interproscan on OGS1.0	2022-03-19
Blast2go on OGS1.0	2022-03-19
Diamond on OGS1.0 vs NR	2022-03-19
Brassica oleracea HDEM OGS1.0	2018-11-02

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
BolSC47t61099H-R	BolSC47t61099H-R	Brassica oleracea HDEM	mRNA	Boleracea_scaffold_47 112579..113901 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>BolSC47t61099H-R-P ID=BolSC47t61099H-R-P|Name=BolSC47t61099H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=441bp
MEKSWFNLMFSKGELEYRGELSKAMDSFAPIEKTTISKDRFIYDMDKNFY
GWGERSSYYNNVDLLVNSKDIRNFISDDTFFVRDSNKNSYSIYFDIKKKK
FEINNDLSDLENFFYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCNNHI
NSCIDSYFRSHICINSHFLSDSNNSNESYIYNFICSESGSGKIRESKNDK
IRTNSNRNNLMSSKDFDITKNYNQLWIQCDNCYGLMYKKVEMNVCEECGH
YLKMTSSERIELSIDLGTWNPMDEDMVSADPIKFHSREEPYKKRIASAQK
KTGLTDAIQTGTGQLNGIPVALGVMDFQFMGGSMGSVVGEKITRLIEYAT
NQYLPLILVCSSGGARMQEGSLSLMQMAKISSVLCDYQSSKKVFYISILT
SPTTGGVTASFGMLGDIIIAEPYAYIAFAGKRVIPCFFFL.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029045	ClpP/crotonase-like_dom_sf
IPR011762	COA_CT_N
IPR034733	AcCoA_carboxyl
IPR000438	Acetyl_CoA_COase_Trfase_b_su

Vocabulary: **Biological Process**
Term	Definition
GO:2001295	malonyl-CoA biosynthetic process
GO:0006633	fatty acid biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016743	carboxyl- or carbamoyltransferase activity
GO:0008270	zinc ion binding
GO:0005524	ATP binding
GO:0003989	acetyl-CoA carboxylase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0009570	chloroplast stroma
GO:0009317	acetyl-CoA carboxylase complex

Orthology

View orthology data for BolSC47t61099H-R-P