BolSC45t60924H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	BolSC45t60924H-R
Unique Name	BolSC45t60924H-R-P
Type	polypeptide
Organism	Brassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length	991

Homology

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BLAST of BolSC45t60924H-R vs. GenBank_protein
Match: VDD65696.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 1896 bits (4912), Expect = 0.000e+0
Identity = 990/990 (100.00%), Postives = 990/990 (100.00%), Query Frame = 0

Query:    1 MANSSEKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEKKQSELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRMNDKDIVEKK 990
            MANSSEKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEKKQSELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRMNDKDIVEKK
Sbjct:    1 MANSSEKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEKKQSELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRMNDKDIVEKK 990

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BLAST of BolSC45t60924H-R vs. GenBank_protein
Match: YP_005089995.1 (ycf2 gene product [Brassica napus] >YP_005090015.1 ycf2 gene product [Brassica napus] >ANW83321.1 Ycf2 [Brassica napus var. napus] >ACY66237.1 ycf2 [Brassica napus] >ACY66298.1 Ycf2 [Brassica napus] >AKD00132.1 ycf2 [Brassica napus] >AKD00152.1 ycf2 [Brassica napus])

HSP 1 Score: 1860 bits (4818), Expect = 0.000e+0
Identity = 974/985 (98.88%), Postives = 979/985 (99.39%), Query Frame = 0

Query:    6 EKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEKKQSELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRMNDKDIVEKK 990
            +KKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEK   ELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRM  K +++K+
Sbjct: 1293 QKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEK-HFELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRMT-KTLLKKR 2275

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BLAST of BolSC45t60924H-R vs. GenBank_protein
Match: ANW83407.1 (Ycf2 [Brassica napus var. napus] >ANW83427.1 Ycf2 [Brassica napus var. napus] >QAY81647.1 hypothetical protein Ycf2 [Brassica rapa] >QAY81667.1 hypothetical protein Ycf2 [Brassica rapa])

HSP 1 Score: 1860 bits (4818), Expect = 0.000e+0
Identity = 974/985 (98.88%), Postives = 979/985 (99.39%), Query Frame = 0

Query:    6 EKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEKKQSELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRMNDKDIVEKK 990
            +KKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEK   ELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRM  K +++K+
Sbjct: 1293 QKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEK-HFELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRMT-KTLLKKR 2275

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BLAST of BolSC45t60924H-R vs. GenBank_protein
Match: WP_188434495.1 (Ycf2 [Agromyces flavus] >YP_009177908.1 hypothetical chloroplast RF21 [Brassica juncea] >YP_009177927.1 hypothetical chloroplast RF21 [Brassica juncea] >YP_009553810.1 hypothetical protein Ycf2 [Brassica rapa] >YP_009553830.1 hypothetical protein Ycf2 [Brassica rapa] >YP_009564618.1 hypothetical protein Ycf2 [Brassica oleracea] >YP_009564638.1 hypothetical protein Ycf2 [Brassica oleracea] >YP_009907404.1 Ycf2 [Brassica rapa subsp. rapa] >YP_009907424.1 Ycf2 [Brassica rapa subsp. rapa] >XP_033129922.1 protein Ycf2 [Brassica rapa] >XP_033138929.1 protein Ycf2 [Brassica rapa] >XP_033138930.1 protein Ycf2 [Brassica rapa] >AIK29047.1 ycf2 [Brassica napus] >AKM97960.1 Ycf2 [Brassica oleracea var. capitata] >ANW83839.1 Ycf2 [Brassica napus var. napus] >ASY93491.1 Ycf2 [Brassica rapa subsp. chinensis] >ASY93578.1 Ycf2 [Brassica rapa subsp. pekinensis] >ASY94100.1 Ycf2 [Brassica oleracea var. botrytis] >ASY94187.1 Ycf2 [Brassica oleracea var. gongylodes] >ASY94274.1 Ycf2 [Brassica oleracea var. italica] >ASY94709.1 Ycf2 [Brassica juncea subsp. integrifolia])

HSP 1 Score: 1860 bits (4818), Expect = 0.000e+0
Identity = 974/985 (98.88%), Postives = 979/985 (99.39%), Query Frame = 0

Query:    6 EKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEKKQSELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRMNDKDIVEKK 990
            +KKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEK   ELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRM  K +++K+
Sbjct: 1293 QKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEK-HFELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRMT-KTLLKKR 2275

[Close]

BLAST of BolSC45t60924H-R vs. GenBank_protein
Match: ASY93665.1 (Ycf2 [Brassica rapa subsp. rapa] >ASY93686.1 Ycf2 [Brassica rapa subsp. rapa])

HSP 1 Score: 1860 bits (4818), Expect = 0.000e+0
Identity = 974/985 (98.88%), Postives = 979/985 (99.39%), Query Frame = 0

Query:    6 EKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEKKQSELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRMNDKDIVEKK 990
            +KKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEK   ELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRM  K +++K+
Sbjct: 1293 QKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEK-HFELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRMT-KTLLKKR 2275

[Close]

BLAST of BolSC45t60924H-R vs. GenBank_protein
Match: QNQ65456.1 (hypothetical chloroplast RF21 [Brassica rapa] >QNQ65477.1 hypothetical chloroplast RF21 [Brassica rapa])

HSP 1 Score: 1859 bits (4815), Expect = 0.000e+0
Identity = 973/985 (98.78%), Postives = 979/985 (99.39%), Query Frame = 0

Query:    6 EKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEKKQSELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRMNDKDIVEKK 990
            +KKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEK   ELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTL+DRM  K +++K+
Sbjct: 1293 QKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEK-HFELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLLDRMT-KTLLKKR 2275

[Close]

BLAST of BolSC45t60924H-R vs. GenBank_protein
Match: QUI76336.1 (Ycf2 [Moricandia arvensis] >QUI76356.1 Ycf2 [Moricandia arvensis])

HSP 1 Score: 1858 bits (4814), Expect = 0.000e+0
Identity = 973/985 (98.78%), Postives = 978/985 (99.29%), Query Frame = 0

Query:    6 EKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEKKQSELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRMNDKDIVEKK 990
            +KKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGE VLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEK   ELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRM  K +++K+
Sbjct: 1293 QKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEGVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEK-HFELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRMT-KTLLKKR 2275

[Close]

BLAST of BolSC45t60924H-R vs. GenBank_protein
Match: CAF2058459.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 1855 bits (4806), Expect = 0.000e+0
Identity = 974/986 (98.78%), Postives = 979/986 (99.29%), Query Frame = 0

Query:    6 EKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRK-LLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEKKQSELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRMNDKDIVEKK 990
            +KKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRK LLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEK   ELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRM  K +++K+
Sbjct: 1293 QKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEK-HFELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRMT-KTLLKKR 2276

[Close]

BLAST of BolSC45t60924H-R vs. GenBank_protein
Match: YP_009896572.1 (Ycf2 [Henophyton deserti] >YP_009896592.1 Ycf2 [Henophyton deserti] >QKK43206.1 Ycf2 [Henophyton deserti] >QKK43226.1 Ycf2 [Henophyton deserti])

HSP 1 Score: 1850 bits (4791), Expect = 0.000e+0
Identity = 968/985 (98.27%), Postives = 976/985 (99.09%), Query Frame = 0

Query:    6 EKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEKKQSELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRMNDKDIVEKK 990
            +KKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKK DLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGS+GTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFF+DDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGE VLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEK ELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEK   ELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTL+DRM  K +++K+
Sbjct: 1291 QKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKKDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSLGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFIDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEGVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKDELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEK-HFELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLLDRMT-KTLLKKR 2273

[Close]

BLAST of BolSC45t60924H-R vs. GenBank_protein
Match: YP_009271610.1 (hypothetical chloroplast RF21 [Cakile arabica] >YP_009893973.1 Ycf2 [Cakile maritima] >YP_009893993.1 Ycf2 [Cakile maritima] >QJF59629.1 hypothetical chloroplast RF21 [Cakile arctica] >QJF59716.1 hypothetical chloroplast RF21 [Cakile edentula] >QJF60325.1 hypothetical chloroplast RF21 [Cakile edentula subsp. harperi] >QJF60673.1 hypothetical chloroplast RF21 [Cakile edentula subsp. lacustris] >QJF65197.1 hypothetical chloroplast RF21 [Cakile lanceolata] >QJF65371.1 hypothetical chloroplast RF21 [Cakile lanceolata subsp. fusiformis] >QJF65716.1 hypothetical chloroplast RF21 [Cakile maritima subsp. islandica] >QJF66325.1 hypothetical chloroplast RF21 [Cakile maritima subsp. euxina] >QJF66934.1 hypothetical chloroplast RF21 [Cakile maritima subsp. baltica])

HSP 1 Score: 1849 bits (4790), Expect = 0.000e+0
Identity = 967/985 (98.17%), Postives = 975/985 (98.98%), Query Frame = 0

Query:    6 EKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEKKQSELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLVDRMNDKDIVEKK 990
            +KKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKK DLKINFI+IIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLR EKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFF+DDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGR VAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGE VLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEK   ELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTL+DRM  K +++K+
Sbjct: 1293 QKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGGDPAYGVKSIRSKKKDLKINFINIIDLISIIPNPINRITFSRNTRHLSHTSKDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRVEKRIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFNTSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSILVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFIDDIDIDDSDXXXXXXXXXXXXXXXXXXXXXXXXXXMDMMSEIDRFYITLQFELAKAMSPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHIPQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHTNGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLISNCPIDPISIYMKKKSCNEGDSYLYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGFIENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYMMQDGSCSIVDQRFLYEKYESEFEEGEGEGVLDPEQIEEDLFNHIVWAPRIWRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSGTMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFADEEMSKGLLTSQTDPPTSIYKRWFIKNTQEK-HFELLIQRQRWLRTNSSLSNGFFRSNTLSESYQYLSNLFLSNGTLLDRMT-KTLLKKR 2275

The following BLAST results are available for this feature:

BLAST of BolSC45t60924H-R vs. GenBank_protein

BLAST of BolSC45t60924H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
VDD65696.1	0.000e+0	100.00	unnamed protein product [Brassica oleracea]	[more]
YP_005089995.1	0.000e+0	98.88	ycf2 gene product [Brassica napus] >YP_005090015.1...	[more]
ANW83407.1	0.000e+0	98.88	Ycf2 [Brassica napus var. napus] >ANW83427.1 Ycf2 ...	[more]
WP_188434495.1	0.000e+0	98.88	Ycf2 [Agromyces flavus] >YP_009177908.1 hypothetic...	[more]
ASY93665.1	0.000e+0	98.88	Ycf2 [Brassica rapa subsp. rapa] >ASY93686.1 Ycf2 ...	[more]
QNQ65456.1	0.000e+0	98.78	hypothetical chloroplast RF21 [Brassica rapa] >QNQ...	[more]
QUI76336.1	0.000e+0	98.78	Ycf2 [Moricandia arvensis] >QUI76356.1 Ycf2 [Moric...	[more]
CAF2058459.1	0.000e+0	98.78	unnamed protein product [Brassica napus]	[more]
YP_009896572.1	0.000e+0	98.27	Ycf2 [Henophyton deserti] >YP_009896592.1 Ycf2 [He...	[more]
YP_009271610.1	0.000e+0	98.17	hypothetical chloroplast RF21 [Cakile arabica] >YP...	[more]

Pages

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0005524	ATP binding

InterPro

Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 346..524 e-value: 2.8E-4 score: 30.2
IPR008543	Uncharacterised protein family Ycf2	PFAM	PF05695	DUF825	coord: 6..200 e-value: 1.2E-111 score: 374.1
IPR008543	Uncharacterised protein family Ycf2	PANTHER	PTHR33078:SF22	PROTEIN YCF2	coord: 151..981
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 327..521 e-value: 2.0E-15 score: 58.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 340..595
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 350..521 e-value: 1.7E-9 score: 38.2
None	No IPR available	PANTHER	PTHR33078	PROTEIN YCF2-RELATED	coord: 151..981
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 78..990
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 56..77
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..55
None	No IPR available	TMHMM	TMhelix		coord: 56..78

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Boleracea_scaffold_45	contig	Boleracea_scaffold_45:116043..119015 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Interproscan on OGS1.0	2022-03-19
Blast2go on OGS1.0	2022-03-19
Diamond on OGS1.0 vs NR	2022-03-19
Brassica oleracea HDEM OGS1.0	2018-11-02

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
BolSC45t60924H-R	BolSC45t60924H-R	Brassica oleracea HDEM	mRNA	Boleracea_scaffold_45 116043..119015 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>BolSC45t60924H-R-P ID=BolSC45t60924H-R-P|Name=BolSC45t60924H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=991bp
MANSSEKKLCLPQRNLISEISSKSLHNLLLSEEMIHRNNESSLISTHLRS
PNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSY
MIELRKLLDRYPTSEQNSFWLKNLFLVALEQLGDCLEEIRGSGGNMLWGG
DPAYGVKSIRSKKTDLKINFIDIIDLISIIPNPINRITFSRNTRHLSHTS
KDIYSLIRKRKNVSGDWIDDKIESWVANSDSIDDKEREFLVQFSTLRAEK
RIDQILLSLTHSDHLSKNDSGYQMIEQPGTIYLRYLVDIHKKYLMNYEFN
TSCLAERRIFLAHYQTITYSQTSCGANSFHFPSHGKPFSLRLALSPSRSI
LVIGSIGTGRSYLVKYLATNSYVPFITVCLNKFLDNKPKGFFLDDIDIDD
SDDIDASNDIDRELDTELELLTMMNALTMDMMSEIDRFYITLQFELAKAM
SPCIIWIPNIHDLDVNESNYLALGLLVNSLSRDCERCSTRNSLVIASTHI
PQKVDPALIAPNKLNTCIKIRRLLIPQQRKHFFTLSYTRGFHLEKKMFHT
NGFESITMGSSARDLVALTNEALSISITQKKSIIDTNTIRSALHRQTWDL
RSQVRSVQDHGILFYQIGRVVAQNVLISNCPIDPISIYMKKKSCNEGDSY
LYKWYFELGTSMKKFTILLYLLSCSAGSVAQDLWSLPGPDEKNRITSYGF
IENDSDLFHGLLEVQGALVGSSRTEKDCSQFDNDRVTLLFRSEPRDPLYM
MQDGSCSIVDQRFLYEKYESEFEEGEGEAVLDPEQIEEDLFNHIVWAPRI
WRPRGFLFDCIERPNELGFPYLAGSFRGKRIIYDEKYELQENDSEFLQSG
TMQYQRRDRSSKEQGFFRISQFIWDPADPLFFLFKDQPFVSVFSHREFFA
DEEMSKGLLTSQTDPPTSIYKRWFIKNTQEKKQSELLIQRQRWLRTNSSL
SNGFFRSNTLSESYQYLSNLFLSNGTLVDRMNDKDIVEKK.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003959	ATPase_AAA_core
IPR027417	P-loop_NTPase
IPR008543	Uncharacterised_Ycf2
IPR003593	AAA+_ATPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0016887	ATPase activity
GO:0005524	ATP binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane
GO:0009570	chloroplast stroma

Orthology

View orthology data for BolSC45t60924H-R-P