BolSC45t60913H-R-P (polypeptide) Brassica oleracea HDEM
Overview
Homology
BLAST of BolSC45t60913H-R vs. GenBank_protein
Match: VDD65685.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 107 bits (267), Expect = 3.920e-29 Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0 Query: 1 MAVPKKRTSISKKRIRKKKNLKRKGYWTSLKAFSLGKSLSTGNSKSFFLYNKINKKH 57 MAVPKKRTSISKKRIRKKKNLKRKGYWTSLKAFSLGKSLSTGNSKSFFLYNKINKKH Sbjct: 1 MAVPKKRTSISKKRIRKKKNLKRKGYWTSLKAFSLGKSLSTGNSKSFFLYNKINKKH 57
BLAST of BolSC45t60913H-R vs. GenBank_protein
Match: YP_009540680.1 (ribosomal protein L32 [Ricotia lunaria] >AYQ22683.1 ribosomal protein L32 [Ricotia lunaria]) HSP 1 Score: 84.0 bits (206), Expect = 7.140e-20 Identity = 48/52 (92.31%), Postives = 48/52 (92.31%), Query Frame = 0 Query: 1 MAVPKKRTSISKKRIRKKKNLKRKGYWTSLKAFSLGKSLSTGNSKSFFLYNK 52 MAVPKKRTSISKKRIRK KN KRKGYWTSLKAFSLGKSLSTGNSKSFFL K Sbjct: 1 MAVPKKRTSISKKRIRK-KNWKRKGYWTSLKAFSLGKSLSTGNSKSFFLQKK 51
BLAST of BolSC45t60913H-R vs. GenBank_protein
Match: YP_009899827.1 (ribosomal protein L32 [Noccaea caerulescens] >QKK46722.1 ribosomal protein L32 [Noccaea caerulescens] >QKK48358.1 ribosomal protein L32 [Pseudoturritis turrita] >QKM79347.1 ribosomal protein L32 [Clausia trichosepala]) HSP 1 Score: 82.8 bits (203), Expect = 2.050e-19 Identity = 47/52 (90.38%), Postives = 48/52 (92.31%), Query Frame = 0 Query: 1 MAVPKKRTSISKKRIRKKKNLKRKGYWTSLKAFSLGKSLSTGNSKSFFLYNK 52 MAVPKKRTSISKKRIRK KN KRKGYWTSLKAFSLGKSLSTGNSKSFF+ K Sbjct: 1 MAVPKKRTSISKKRIRK-KNWKRKGYWTSLKAFSLGKSLSTGNSKSFFVQQK 51
BLAST of BolSC45t60913H-R vs. GenBank_protein
Match: YP_001123248.1 (ribosomal protein L32 [Arabis hirsuta] >YP_009478024.1 ribosomal protein L32 [Arabis flagellosa] >YP_009827403.1 ribosomal protein L32 [Arabis scabra] >YP_009897600.1 ribosomal protein L32 [Iodanthus pinnatifidus] >YP_010026522.1 ribosomal protein L32 [Arabis paniculata] >A4QK68.1 RecName: Full=50S ribosomal protein L32, chloroplastic [Arabis hirsuta] >ARI46784.1 ribosomal protein L32 [Arabis stelleri subsp. japonica] >QKK51304.1 ribosomal protein L32 [Vella lucentina] >VDD31486.1 unnamed protein product [Brassica oleracea] >BBC42888.1 ribosomal protein L32 [Arabis hirsuta var. nipponica] >QIV22565.1 ribosomal protein L32 [Arabis scabra]) HSP 1 Score: 82.0 bits (201), Expect = 4.140e-19 Identity = 46/49 (93.88%), Postives = 47/49 (95.92%), Query Frame = 0 Query: 1 MAVPKKRTSISKKRIRKKKNLKRKGYWTSLKAFSLGKSLSTGNSKSFFL 49 MAVPKKRTSISKKRIRK KN KRKGYWTSLKAFSLGKSLSTGNSKSFF+ Sbjct: 1 MAVPKKRTSISKKRIRK-KNWKRKGYWTSLKAFSLGKSLSTGNSKSFFV 48
BLAST of BolSC45t60913H-R vs. GenBank_protein
Match: YP_009891389.1 (ribosomal protein L32 [Aphragmus nepalensis] >QKK37762.1 ribosomal protein L32 [Aphragmus nepalensis]) HSP 1 Score: 82.0 bits (201), Expect = 4.670e-19 Identity = 46/49 (93.88%), Postives = 47/49 (95.92%), Query Frame = 0 Query: 1 MAVPKKRTSISKKRIRKKKNLKRKGYWTSLKAFSLGKSLSTGNSKSFFL 49 MAVPKKRTSISKKRIRK KN KRKGYWTSLKAFSLGKSLSTGNSKSFF+ Sbjct: 1 MAVPKKRTSISKKRIRK-KNWKRKGYWTSLKAFSLGKSLSTGNSKSFFV 48
BLAST of BolSC45t60913H-R vs. GenBank_protein
Match: YP_009892854.1 (ribosomal protein L32 [Biscutella vincentina] >QKK39227.1 ribosomal protein L32 [Biscutella vincentina]) HSP 1 Score: 80.9 bits (198), Expect = 1.190e-18 Identity = 46/49 (93.88%), Postives = 47/49 (95.92%), Query Frame = 0 Query: 1 MAVPKKRTSISKKRIRKKKNLKRKGYWTSLKAFSLGKSLSTGNSKSFFL 49 MAVPKKRTSISKKRIRK K LKRKGYWTSLKAFSLGKSLSTGNSKSFF+ Sbjct: 1 MAVPKKRTSISKKRIRK-KILKRKGYWTSLKAFSLGKSLSTGNSKSFFV 48
BLAST of BolSC45t60913H-R vs. GenBank_protein
Match: APS85129.1 (ribosomal protein L32 [Orychophragmus zhongtiaoshanus]) HSP 1 Score: 80.5 bits (197), Expect = 1.690e-18 Identity = 46/52 (88.46%), Postives = 47/52 (90.38%), Query Frame = 0 Query: 1 MAVPKKRTSISKKRIRKKKNLKRKGYWTSLKAFSLGKSLSTGNSKSFFLYNK 52 MAVPKKRTSISKKRIRK KN KRKGYWTSLKA SLGKSLSTGNSKSFF+ K Sbjct: 1 MAVPKKRTSISKKRIRK-KNWKRKGYWTSLKAISLGKSLSTGNSKSFFVQQK 51
BLAST of BolSC45t60913H-R vs. GenBank_protein
Match: YP_009540595.1 (ribosomal protein L32 [Ricotia isatoides] >AYQ22598.1 ribosomal protein L32 [Ricotia isatoides] >AYQ22769.1 ribosomal protein L32 [Ricotia isatoides]) HSP 1 Score: 80.5 bits (197), Expect = 1.690e-18 Identity = 47/52 (90.38%), Postives = 47/52 (90.38%), Query Frame = 0 Query: 1 MAVPKKRTSISKKRIRKKKNLKRKGYWTSLKAFSLGKSLSTGNSKSFFLYNK 52 MAVPKKRTSISKKRIRK K KRKGYWTSLKAFSLGKSLSTGNSKSFFL K Sbjct: 1 MAVPKKRTSISKKRIRK-KIWKRKGYWTSLKAFSLGKSLSTGNSKSFFLQQK 51
BLAST of BolSC45t60913H-R vs. GenBank_protein
Match: QKK48617.1 (ribosomal protein L32 [Ricotia lunaria]) HSP 1 Score: 80.5 bits (197), Expect = 1.690e-18 Identity = 47/52 (90.38%), Postives = 47/52 (90.38%), Query Frame = 0 Query: 1 MAVPKKRTSISKKRIRKKKNLKRKGYWTSLKAFSLGKSLSTGNSKSFFLYNK 52 MAVPKKRTSISKKRIRK K KRKGYWTSLKAFSLGKSLSTGNSKSFFL K Sbjct: 1 MAVPKKRTSISKKRIRK-KIWKRKGYWTSLKAFSLGKSLSTGNSKSFFLQKK 51
BLAST of BolSC45t60913H-R vs. GenBank_protein
Match: YP_009898109.1 (ribosomal protein L32 [Ladakiella klimesii] >QKK44830.1 ribosomal protein L32 [Ladakiella klimesii]) HSP 1 Score: 80.1 bits (196), Expect = 2.400e-18 Identity = 45/49 (91.84%), Postives = 47/49 (95.92%), Query Frame = 0 Query: 1 MAVPKKRTSISKKRIRKKKNLKRKGYWTSLKAFSLGKSLSTGNSKSFFL 49 MAVPKKRTSISKKRIRK K+ KRKGYWTSLKAFSLGKSLSTGNSKSFF+ Sbjct: 1 MAVPKKRTSISKKRIRK-KSWKRKGYWTSLKAFSLGKSLSTGNSKSFFV 48 The following BLAST results are available for this feature:
BLAST of BolSC45t60913H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR) Total hits: 20
Pagesback to topGO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BolSC45t60913H-R-P ID=BolSC45t60913H-R-P|Name=BolSC45t60913H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=58bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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