BolC9t60204H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameBolC9t60204H-R
Unique NameBolC9t60204H-R-P
Typepolypeptide
OrganismBrassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length212
Homology
BLAST of BolC9t60204H-R vs. GenBank_protein
Match: VDD34881.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 425 bits (1093), Expect = 3.500e-150
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
Query:    1 MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW
Sbjct:    1 MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211          
BLAST of BolC9t60204H-R vs. GenBank_protein
Match: XP_013609774.1 (PREDICTED: uncharacterized protein LOC106316431 [Brassica oleracea var. oleracea] >XP_013609923.1 PREDICTED: uncharacterized protein LOC106316579 [Brassica oleracea var. oleracea] >XP_013732744.1 uncharacterized protein BNACNNG40650D [Brassica napus] >CAF1793420.1 unnamed protein product [Brassica napus] >CDY62638.1 BnaCnng40650D [Brassica napus])

HSP 1 Score: 422 bits (1086), Expect = 4.090e-149
Identity = 209/211 (99.05%), Postives = 210/211 (99.53%), Query Frame = 0
Query:    1 MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGA GSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFK+QTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW
Sbjct:    1 MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKYQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211          
BLAST of BolC9t60204H-R vs. GenBank_protein
Match: KAG2245112.1 (hypothetical protein Bca52824_093047 [Brassica carinata])

HSP 1 Score: 379 bits (974), Expect = 1.920e-132
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0
Query:   27 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW
Sbjct:    1 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 185          
BLAST of BolC9t60204H-R vs. GenBank_protein
Match: KAF2536059.1 (hypothetical protein F2Q68_00023622 [Brassica cretica] >KAF2571824.1 hypothetical protein F2Q70_00006944 [Brassica cretica])

HSP 1 Score: 378 bits (970), Expect = 7.840e-132
Identity = 184/185 (99.46%), Postives = 184/185 (99.46%), Query Frame = 0
Query:   27 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGA GSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW
Sbjct:    1 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 185          
BLAST of BolC9t60204H-R vs. GenBank_protein
Match: KAF3499860.1 (hypothetical protein F2Q69_00045900 [Brassica cretica])

HSP 1 Score: 376 bits (965), Expect = 4.530e-131
Identity = 183/185 (98.92%), Postives = 183/185 (98.92%), Query Frame = 0
Query:   27 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGA GSIPFEWESHPGTP HPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW
Sbjct:    1 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPNHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 185          
BLAST of BolC9t60204H-R vs. GenBank_protein
Match: KAF3565901.1 (hypothetical protein DY000_02020010 [Brassica cretica])

HSP 1 Score: 375 bits (964), Expect = 6.440e-131
Identity = 183/185 (98.92%), Postives = 183/185 (98.92%), Query Frame = 0
Query:   27 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGA GSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSS DSSIDHHPTTRRSQSTSCFGIRIW
Sbjct:    1 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSLDSSIDHHPTTRRSQSTSCFGIRIW 185          
BLAST of BolC9t60204H-R vs. GenBank_protein
Match: KAG2245117.1 (hypothetical protein Bca52824_093052 [Brassica carinata])

HSP 1 Score: 369 bits (946), Expect = 1.960e-120
Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 0
Query:   27 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRI 210
            MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSK PMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRI
Sbjct:    1 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSK-PMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRI 183          
BLAST of BolC9t60204H-R vs. GenBank_protein
Match: KAG2262344.1 (hypothetical protein Bca52824_069423 [Brassica carinata])

HSP 1 Score: 345 bits (884), Expect = 1.010e-118
Identity = 168/185 (90.81%), Postives = 175/185 (94.59%), Query Frame = 0
Query:   27 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTNGGSE PA LRKQDTDTFSHKIPSTKQRFSSPASACPSFRIY++DG  GSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQ  R SKKP+KKILALIPTRLFWLS GGH+NKVKK+SASS SLSERVLIDENEYH+FKFQTKGKVIKRFSSFDSSIDH+PT RRSQSTSCFGIRIW
Sbjct:    1 MTNGGSERPAPLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYHYDGVAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQIRRGSKKPIKKILALIPTRLFWLSSGGHRNKVKKMSASSVSLSERVLIDENEYHLFKFQTKGKVIKRFSSFDSSIDHYPTIRRSQSTSCFGIRIW 185          
BLAST of BolC9t60204H-R vs. GenBank_protein
Match: XP_018444436.1 (PREDICTED: uncharacterized protein LOC108816362 [Raphanus sativus])

HSP 1 Score: 333 bits (854), Expect = 3.900e-114
Identity = 163/186 (87.63%), Postives = 173/186 (93.01%), Query Frame = 0
Query:   27 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCR-SSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTNGGSE P SLRKQDT+TFSHKIPSTKQRFSSPASACPSFRIYY+DGA GSIPF+WESHPGTPKHPSSELPP LPLTPPPSHFSFS DQ  R  SKKP+KKILALIP RLFWLS GGH NKVKK+SASS+SLSERVLID+NEYH+FKFQTKGKV+KRFSSFDSSIDH+PT RRSQSTSCFGIRIW
Sbjct:    1 MTNGGSERPVSLRKQDTNTFSHKIPSTKQRFSSPASACPSFRIYYYDGAAGSIPFDWESHPGTPKHPSSELPPSLPLTPPPSHFSFSSDQIFRRGSKKPIKKILALIPARLFWLSSGGHNNKVKKMSASSQSLSERVLIDDNEYHLFKFQTKGKVVKRFSSFDSSIDHYPTIRRSQSTSCFGIRIW 186          
BLAST of BolC9t60204H-R vs. GenBank_protein
Match: KAG2296578.1 (hypothetical protein Bca52824_043247 [Brassica carinata])

HSP 1 Score: 330 bits (846), Expect = 4.240e-113
Identity = 168/185 (90.81%), Postives = 171/185 (92.43%), Query Frame = 0
Query:   27 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASA           + GSIPFEWESHPGTPKHPSSELPPPL LTPPPSHFSFSGDQT RSSK+PMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHP+TRRSQSTSCFGIRIW
Sbjct:    1 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASA-----------SAGSIPFEWESHPGTPKHPSSELPPPLLLTPPPSHFSFSGDQTRRSSKRPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPSTRRSQSTSCFGIRIW 174          
The following BLAST results are available for this feature:
BLAST of BolC9t60204H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20
Match NameE-valueIdentityDescription
VDD34881.13.500e-150100.00unnamed protein product [Brassica oleracea][more]
XP_013609774.14.090e-14999.05PREDICTED: uncharacterized protein LOC106316431 [B... [more]
KAG2245112.11.920e-132100.00hypothetical protein Bca52824_093047 [Brassica car... [more]
KAF2536059.17.840e-13299.46hypothetical protein F2Q68_00023622 [Brassica cret... [more]
KAF3499860.14.530e-13198.92hypothetical protein F2Q69_00045900 [Brassica cret... [more]
KAF3565901.16.440e-13198.92hypothetical protein DY000_02020010 [Brassica cret... [more]
KAG2245117.11.960e-12099.46hypothetical protein Bca52824_093052 [Brassica car... [more]
KAG2262344.11.010e-11890.81hypothetical protein Bca52824_069423 [Brassica car... [more]
XP_018444436.13.900e-11487.63PREDICTED: uncharacterized protein LOC108816362 [R... [more]
KAG2296578.14.240e-11390.81hypothetical protein Bca52824_043247 [Brassica car... [more]

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InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33257OS05G0165500 PROTEINcoord: 1..211
NoneNo IPR availablePANTHERPTHR33257:SF37BNACNNG40650D PROTEINcoord: 1..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C9contigC9:63206649..63207284 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Interproscan on OGS1.02022-03-19
Diamond on OGS1.0 vs NR2022-03-19
Brassica oleracea HDEM OGS1.02018-11-02
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
BolC9t60204H-RBolC9t60204H-RBrassica oleracea HDEMmRNAC9 63206649..63207284 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>BolC9t60204H-R-P ID=BolC9t60204H-R-P|Name=BolC9t60204H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=212bp
MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKI
PSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPP
LPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKK
LSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRS
QSTSCFGIRIW.
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