BolC9t60204H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	BolC9t60204H-R
Unique Name	BolC9t60204H-R-P
Type	polypeptide
Organism	Brassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length	212

Homology

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BLAST of BolC9t60204H-R vs. GenBank_protein
Match: VDD34881.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 425 bits (1093), Expect = 3.500e-150
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0

Query:    1 MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW
Sbjct:    1 MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211

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BLAST of BolC9t60204H-R vs. GenBank_protein
Match: XP_013609774.1 (PREDICTED: uncharacterized protein LOC106316431 [Brassica oleracea var. oleracea] >XP_013609923.1 PREDICTED: uncharacterized protein LOC106316579 [Brassica oleracea var. oleracea] >XP_013732744.1 uncharacterized protein BNACNNG40650D [Brassica napus] >CAF1793420.1 unnamed protein product [Brassica napus] >CDY62638.1 BnaCnng40650D [Brassica napus])

HSP 1 Score: 422 bits (1086), Expect = 4.090e-149
Identity = 209/211 (99.05%), Postives = 210/211 (99.53%), Query Frame = 0

Query:    1 MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGA GSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFK+QTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW
Sbjct:    1 MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKYQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211

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BLAST of BolC9t60204H-R vs. GenBank_protein
Match: KAG2245112.1 (hypothetical protein Bca52824_093047 [Brassica carinata])

HSP 1 Score: 379 bits (974), Expect = 1.920e-132
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0

Query:   27 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW
Sbjct:    1 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 185

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BLAST of BolC9t60204H-R vs. GenBank_protein
Match: KAF2536059.1 (hypothetical protein F2Q68_00023622 [Brassica cretica] >KAF2571824.1 hypothetical protein F2Q70_00006944 [Brassica cretica])

HSP 1 Score: 378 bits (970), Expect = 7.840e-132
Identity = 184/185 (99.46%), Postives = 184/185 (99.46%), Query Frame = 0

Query:   27 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGA GSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW
Sbjct:    1 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 185

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BLAST of BolC9t60204H-R vs. GenBank_protein
Match: KAF3499860.1 (hypothetical protein F2Q69_00045900 [Brassica cretica])

HSP 1 Score: 376 bits (965), Expect = 4.530e-131
Identity = 183/185 (98.92%), Postives = 183/185 (98.92%), Query Frame = 0

Query:   27 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGA GSIPFEWESHPGTP HPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW
Sbjct:    1 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPNHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 185

[Close]

BLAST of BolC9t60204H-R vs. GenBank_protein
Match: KAF3565901.1 (hypothetical protein DY000_02020010 [Brassica cretica])

HSP 1 Score: 375 bits (964), Expect = 6.440e-131
Identity = 183/185 (98.92%), Postives = 183/185 (98.92%), Query Frame = 0

Query:   27 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGA GSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSS DSSIDHHPTTRRSQSTSCFGIRIW
Sbjct:    1 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSLDSSIDHHPTTRRSQSTSCFGIRIW 185

[Close]

BLAST of BolC9t60204H-R vs. GenBank_protein
Match: KAG2245117.1 (hypothetical protein Bca52824_093052 [Brassica carinata])

HSP 1 Score: 369 bits (946), Expect = 1.960e-120
Identity = 183/184 (99.46%), Postives = 183/184 (99.46%), Query Frame = 0

Query:   27 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRI 210
            MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSK PMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRI
Sbjct:    1 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSK-PMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRI 183

[Close]

BLAST of BolC9t60204H-R vs. GenBank_protein
Match: KAG2262344.1 (hypothetical protein Bca52824_069423 [Brassica carinata])

HSP 1 Score: 345 bits (884), Expect = 1.010e-118
Identity = 168/185 (90.81%), Postives = 175/185 (94.59%), Query Frame = 0

Query:   27 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTNGGSE PA LRKQDTDTFSHKIPSTKQRFSSPASACPSFRIY++DG  GSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQ  R SKKP+KKILALIPTRLFWLS GGH+NKVKK+SASS SLSERVLIDENEYH+FKFQTKGKVIKRFSSFDSSIDH+PT RRSQSTSCFGIRIW
Sbjct:    1 MTNGGSERPAPLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYHYDGVAGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQIRRGSKKPIKKILALIPTRLFWLSSGGHRNKVKKMSASSVSLSERVLIDENEYHLFKFQTKGKVIKRFSSFDSSIDHYPTIRRSQSTSCFGIRIW 185

[Close]

BLAST of BolC9t60204H-R vs. GenBank_protein
Match: XP_018444436.1 (PREDICTED: uncharacterized protein LOC108816362 [Raphanus sativus])

HSP 1 Score: 333 bits (854), Expect = 3.900e-114
Identity = 163/186 (87.63%), Postives = 173/186 (93.01%), Query Frame = 0

Query:   27 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCR-SSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTNGGSE P SLRKQDT+TFSHKIPSTKQRFSSPASACPSFRIYY+DGA GSIPF+WESHPGTPKHPSSELPP LPLTPPPSHFSFS DQ  R  SKKP+KKILALIP RLFWLS GGH NKVKK+SASS+SLSERVLID+NEYH+FKFQTKGKV+KRFSSFDSSIDH+PT RRSQSTSCFGIRIW
Sbjct:    1 MTNGGSERPVSLRKQDTNTFSHKIPSTKQRFSSPASACPSFRIYYYDGAAGSIPFDWESHPGTPKHPSSELPPSLPLTPPPSHFSFSSDQIFRRGSKKPIKKILALIPARLFWLSSGGHNNKVKKMSASSQSLSERVLIDDNEYHLFKFQTKGKVVKRFSSFDSSIDHYPTIRRSQSTSCFGIRIW 186

[Close]

BLAST of BolC9t60204H-R vs. GenBank_protein
Match: KAG2296578.1 (hypothetical protein Bca52824_043247 [Brassica carinata])

HSP 1 Score: 330 bits (846), Expect = 4.240e-113
Identity = 168/185 (90.81%), Postives = 171/185 (92.43%), Query Frame = 0

Query:   27 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPPLPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRSQSTSCFGIRIW 211
            MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASA           + GSIPFEWESHPGTPKHPSSELPPPL LTPPPSHFSFSGDQT RSSK+PMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHP+TRRSQSTSCFGIRIW
Sbjct:    1 MTNGGSESPASLRKQDTDTFSHKIPSTKQRFSSPASA-----------SAGSIPFEWESHPGTPKHPSSELPPPLLLTPPPSHFSFSGDQTRRSSKRPMKKILALIPTRLFWLSPGGHKNKVKKLSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPSTRRSQSTSCFGIRIW 174

The following BLAST results are available for this feature:

BLAST of BolC9t60204H-R vs. GenBank_protein

BLAST of BolC9t60204H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
VDD34881.1	3.500e-150	100.00	unnamed protein product [Brassica oleracea]	[more]
XP_013609774.1	4.090e-149	99.05	PREDICTED: uncharacterized protein LOC106316431 [B...	[more]
KAG2245112.1	1.920e-132	100.00	hypothetical protein Bca52824_093047 [Brassica car...	[more]
KAF2536059.1	7.840e-132	99.46	hypothetical protein F2Q68_00023622 [Brassica cret...	[more]
KAF3499860.1	4.530e-131	98.92	hypothetical protein F2Q69_00045900 [Brassica cret...	[more]
KAF3565901.1	6.440e-131	98.92	hypothetical protein DY000_02020010 [Brassica cret...	[more]
KAG2245117.1	1.960e-120	99.46	hypothetical protein Bca52824_093052 [Brassica car...	[more]
KAG2262344.1	1.010e-118	90.81	hypothetical protein Bca52824_069423 [Brassica car...	[more]
XP_018444436.1	3.900e-114	87.63	PREDICTED: uncharacterized protein LOC108816362 [R...	[more]
KAG2296578.1	4.240e-113	90.81	hypothetical protein Bca52824_043247 [Brassica car...	[more]

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InterPro

Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33257	OS05G0165500 PROTEIN	coord: 1..211
None	No IPR available	PANTHER	PTHR33257:SF37	BNACNNG40650D PROTEIN	coord: 1..211

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C9	contig	C9:63206649..63207284 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Interproscan on OGS1.0	2022-03-19
Diamond on OGS1.0 vs NR	2022-03-19
Brassica oleracea HDEM OGS1.0	2018-11-02

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
BolC9t60204H-R	BolC9t60204H-R	Brassica oleracea HDEM	mRNA	C9 63206649..63207284 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>BolC9t60204H-R-P ID=BolC9t60204H-R-P|Name=BolC9t60204H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=212bp
MTLAPYILVPYVSYASLSLSQSPKTIMTNGGSESPASLRKQDTDTFSHKI
PSTKQRFSSPASACPSFRIYYHDGAVGSIPFEWESHPGTPKHPSSELPPP
LPLTPPPSHFSFSGDQTCRSSKKPMKKILALIPTRLFWLSPGGHKNKVKK
LSASSESLSERVLIDENEYHMFKFQTKGKVIKRFSSFDSSIDHHPTTRRS
QSTSCFGIRIW.

Orthology

View orthology data for BolC9t60204H-R-P