BolC9t59908H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	BolC9t59908H-R
Unique Name	BolC9t59908H-R-P
Type	polypeptide
Organism	Brassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length	230

Homology

[Close]

BLAST of BolC9t59908H-R vs. GenBank_protein
Match: XP_013741473.1 (uncharacterized protein BNAC09G50070D [Brassica napus] >CAF1790484.1 unnamed protein product [Brassica napus] >VDD34585.1 unnamed protein product [Brassica oleracea])

HSP 1 Score: 459 bits (1182), Expect = 3.750e-163
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0

Query:    1 MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDGTRRINVGTISASVAEAVSEIEKQRGGKRSGGRDRREVEVTREKLDRWMKESVTEIVKNLSEAPLLVHMYAGDEEKGTVVVMKAEEWAAVKERWERGEAEMPDGMIFVEQLGVGEEESCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMQCTHFCLAKVSSFRETSESQLRNCWLVGN 229
            MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDGTRRINVGTISASVAEAVSEIEKQRGGKRSGGRDRREVEVTREKLDRWMKESVTEIVKNLSEAPLLVHMYAGDEEKGTVVVMKAEEWAAVKERWERGEAEMPDGMIFVEQLGVGEEESCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMQCTHFCLAKVSSFRETSESQLRNCWLVGN
Sbjct:    1 MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDGTRRINVGTISASVAEAVSEIEKQRGGKRSGGRDRREVEVTREKLDRWMKESVTEIVKNLSEAPLLVHMYAGDEEKGTVVVMKAEEWAAVKERWERGEAEMPDGMIFVEQLGVGEEESCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMQCTHFCLAKVSSFRETSESQLRNCWLVGN 229

[Close]

BLAST of BolC9t59908H-R vs. GenBank_protein
Match: XP_013609025.1 (PREDICTED: uncharacterized protein LOC106315753 [Brassica oleracea var. oleracea])

HSP 1 Score: 453 bits (1166), Expect = 1.030e-160
Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 0

Query:    1 MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDGTRRINVGTISASVAEAVSEIEKQRGGKRSGGRDRREVEVTREKLDRWMKESVTEIVKNLSEAPLLVHMYAGDEEKGTVVVMKAEEWAAVKERWERGEAEMPDGMIFVEQLGVGEEESCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMQCTHFCLAKVSSFRETSESQLRNCWLVG 228
            MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDGTRRINVGTISASVAEAVSEIEKQRGGKRSGGRDRREVEVTREKLDRWMKESVTEIVKNLSEAPLLVH+YAGDEEKGTVVVMKAEEWAAVK RWERGEAEMPDGMIFVEQLGVGEEESCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMQCTHFCLAKVSSFRETSESQLRNCWLVG
Sbjct:    1 MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDGTRRINVGTISASVAEAVSEIEKQRGGKRSGGRDRREVEVTREKLDRWMKESVTEIVKNLSEAPLLVHLYAGDEEKGTVVVMKAEEWAAVKGRWERGEAEMPDGMIFVEQLGVGEEESCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMQCTHFCLAKVSSFRETSESQLRNCWLVG 228

[Close]

BLAST of BolC9t59908H-R vs. GenBank_protein
Match: KAF2537736.1 (hypothetical protein F2Q68_00023302 [Brassica cretica] >KAF2575250.1 hypothetical protein F2Q70_00006615 [Brassica cretica])

HSP 1 Score: 446 bits (1148), Expect = 5.730e-158
Identity = 221/229 (96.51%), Postives = 225/229 (98.25%), Query Frame = 0

Query:    1 MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDGTRRINVGTISASVAEAVSEIEKQRGGKRSGGRDRREVEVTREKLDRWMKESVTEIVKNLSEAPLLVHMYAGDEEKGTVVVMKAEEWAAVKERWERGEAEMPDGMIFVEQLGVGEEESCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMQCTHFCLAKVSSFRETSESQLRNCWLVGN 229
            MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDG RRINVGTISAS+AEAVSEIEKQRGG+RSGGRDRR VEVTREKLDRWMKESVTEIVKNLSEAPLLVH+YAGDEEKGTVVVMKAEEWAAVK RWERGEAEMPDGMIFVEQLG GEEE+CGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMQCTHFCLAKVSSFRETSESQLRNCWLVGN
Sbjct:    1 MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDGNRRINVGTISASLAEAVSEIEKQRGGRRSGGRDRRAVEVTREKLDRWMKESVTEIVKNLSEAPLLVHLYAGDEEKGTVVVMKAEEWAAVKGRWERGEAEMPDGMIFVEQLGAGEEENCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMQCTHFCLAKVSSFRETSESQLRNCWLVGN 229

[Close]

BLAST of BolC9t59908H-R vs. GenBank_protein
Match: KAF3499891.1 (hypothetical protein F2Q69_00045545 [Brassica cretica])

HSP 1 Score: 444 bits (1142), Expect = 4.710e-157
Identity = 220/229 (96.07%), Postives = 224/229 (97.82%), Query Frame = 0

Query:    1 MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDGTRRINVGTISASVAEAVSEIEKQRGGKRSGGRDRREVEVTREKLDRWMKESVTEIVKNLSEAPLLVHMYAGDEEKGTVVVMKAEEWAAVKERWERGEAEMPDGMIFVEQLGVGEEESCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMQCTHFCLAKVSSFRETSESQLRNCWLVGN 229
            MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDG RRINVGTISAS+AEAVSEIEKQRGG+RSGGRDR  VEVTREKLDRWMKESVTEIVKNLSEAPLLVH+YAGDEEKGTVVVMKAEEWAAVK RWERGEAEMPDGMIFVEQLG GEEE+CGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMQCTHFCLAKVSSFRETSESQLRNCWLVGN
Sbjct:    1 MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDGNRRINVGTISASLAEAVSEIEKQRGGRRSGGRDRTAVEVTREKLDRWMKESVTEIVKNLSEAPLLVHLYAGDEEKGTVVVMKAEEWAAVKGRWERGEAEMPDGMIFVEQLGAGEEENCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMQCTHFCLAKVSSFRETSESQLRNCWLVGN 229

[Close]

BLAST of BolC9t59908H-R vs. GenBank_protein
Match: XP_009122134.1 (uncharacterized protein LOC103846878 [Brassica rapa] >XP_033137339.1 uncharacterized protein LOC103846878 [Brassica rapa] >RID42818.1 hypothetical protein BRARA_J02676 [Brassica rapa] >CAF2359669.1 unnamed protein product [Brassica napus] >VDD20949.1 unnamed protein product [Brassica rapa])

HSP 1 Score: 441 bits (1135), Expect = 5.500e-156
Identity = 218/229 (95.20%), Postives = 225/229 (98.25%), Query Frame = 0

Query:    1 MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDGTRRINVGTISASVAEAVSEIEKQRGGKRSGGRDRREVEVTREKLDRWMKESVTEIVKNLSEAPLLVHMYAGDEEKGTVVVMKAEEWAAVKERWERGEAEMPDGMIFVEQLGVGEEESCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMQCTHFCLAKVSSFRETSESQLRNCWLVGN 229
            MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDG RRINV TISAS+AEAVSEIEKQRGG+RSGGRDRREVEVTREKLDRWMKESVTEIVKNLSEAPLLVH+YAGDEEKGTVVVMKAEEWAAVK RW+RGEAEMPDGMIFVEQLG G+EE+CGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMQCTHFCLAKVSSFRET+ESQLRNCWLVGN
Sbjct:    1 MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDGNRRINVVTISASMAEAVSEIEKQRGGRRSGGRDRREVEVTREKLDRWMKESVTEIVKNLSEAPLLVHLYAGDEEKGTVVVMKAEEWAAVKGRWKRGEAEMPDGMIFVEQLGAGDEENCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMQCTHFCLAKVSSFRETAESQLRNCWLVGN 229

[Close]

BLAST of BolC9t59908H-R vs. GenBank_protein
Match: XP_013715373.1 (uncharacterized protein LOC106419168 [Brassica napus])

HSP 1 Score: 439 bits (1128), Expect = 6.420e-155
Identity = 217/229 (94.76%), Postives = 223/229 (97.38%), Query Frame = 0

Query:    1 MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDGTRRINVGTISASVAEAVSEIEKQRGGKRSGGRDRREVEVTREKLDRWMKESVTEIVKNLSEAPLLVHMYAGDEEKGTVVVMKAEEWAAVKERWERGEAEMPDGMIFVEQLGVGEEESCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMQCTHFCLAKVSSFRETSESQLRNCWLVGN 229
            MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDG RRINV TISAS+AEAVSEIEKQRGG+RSGGRDRR VEVTREKLDRWMKESVTEIVKNLSEAPLLVH+Y GDEEKGTVVVMKAEEWAAVK RW+RGEAEMPDGMIFVEQLG GEEE+CGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMQCTHFCLAKVSSFRET+ESQLRNCWLVGN
Sbjct:    1 MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDGNRRINVVTISASMAEAVSEIEKQRGGRRSGGRDRRAVEVTREKLDRWMKESVTEIVKNLSEAPLLVHLYGGDEEKGTVVVMKAEEWAAVKGRWKRGEAEMPDGMIFVEQLGAGEEENCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMQCTHFCLAKVSSFRETAESQLRNCWLVGN 229

[Close]

BLAST of BolC9t59908H-R vs. GenBank_protein
Match: XP_018444411.1 (PREDICTED: uncharacterized protein LOC108816333 [Raphanus sativus])

HSP 1 Score: 438 bits (1126), Expect = 1.300e-154
Identity = 217/229 (94.76%), Postives = 224/229 (97.82%), Query Frame = 0

Query:    1 MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDGTRRINVGTISASVAEAVSEIEKQRGGKRSGGRDRREVEVTREKLDRWMKESVTEIVKNLSEAPLLVHMYAGDEEKGTVVVMKAEEWAAVKERWERGEAEMPDGMIFVEQLGVGEEESCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMQCTHFCLAKVSSFRETSESQLRNCWLVGN 229
            MAYA+IGYGGTYLVHRGILESDNNARSL SSFPINRDG+RRINVGTISASVAEAVSEIEKQRGG+RSGGRDRREVEVTREKLDRWMK SVTEIVKNLSEAPLLVH+YAGDEEKGTVVVMKAEEWAAVK RWERGEAEMPDG+IFVEQLG  EEESCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSM+CTHFCLAKVSSFRET+ESQLRNCWLVGN
Sbjct:    1 MAYARIGYGGTYLVHRGILESDNNARSLSSSFPINRDGSRRINVGTISASVAEAVSEIEKQRGGRRSGGRDRREVEVTREKLDRWMKNSVTEIVKNLSEAPLLVHLYAGDEEKGTVVVMKAEEWAAVKGRWERGEAEMPDGIIFVEQLGTTEEESCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMRCTHFCLAKVSSFRETTESQLRNCWLVGN 229

[Close]

BLAST of BolC9t59908H-R vs. GenBank_protein
Match: KAG2262625.1 (hypothetical protein Bca52824_069704 [Brassica carinata])

HSP 1 Score: 419 bits (1077), Expect = 2.480e-147
Identity = 216/229 (94.32%), Postives = 216/229 (94.32%), Query Frame = 0

Query:    1 MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDGTRRINVGTISASVAEAVSEIEKQRGGKRSGGRDRREVEVTREKLDRWMKESVTEIVKNLSEAPLLVHMYAGDEEKGTVVVMKAEEWAAVKERWERGEAEMPDGMIFVEQLGVGEEESCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMQCTHFCLAKVSSFRETSESQLRNCWLVGN 229
            MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDGTRRINVGTISASVAEAVSEIEKQRGGK SGGRDRREVEVTREKLDRWMKESVTEIVKNLSEAPLLVHMYAGDEEKGTVVVMKAEEWAAVKERWERGEAEMPDGMIFVEQLGVGEEESCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSM            FRETSESQLRNCWLVGN
Sbjct:    1 MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDGTRRINVGTISASVAEAVSEIEKQRGGK-SGGRDRREVEVTREKLDRWMKESVTEIVKNLSEAPLLVHMYAGDEEKGTVVVMKAEEWAAVKERWERGEAEMPDGMIFVEQLGVGEEESCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSMH-----------FRETSESQLRNCWLVGN 217

[Close]

BLAST of BolC9t59908H-R vs. GenBank_protein
Match: KAF8115207.1 (hypothetical protein N665_0029s0050 [Sinapis alba])

HSP 1 Score: 383 bits (984), Expect = 7.560e-133
Identity = 199/237 (83.97%), Postives = 212/237 (89.45%), Query Frame = 0

Query:    1 MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDGTRRINVGTISASVAEAVSEIEKQRGGKRSGG---RDRREVEVTREKLDRWMKESVTEIVKNLSEAPLLVHMYAGDEEKGTVV-VMKAEEWAAVKERWERGEAEMPDGMIFVEQLGVGEEESCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSG----LSMQCTHFCLAKVSSFRETSESQLRNCWLVGN 229
            MAYA+IG GGTYLVHRG+LESDNNARSL SSFPI+RDG+RRINV TI+ASV+EAV+EIEKQRGG        RD REVEVTREKLD WMKESVTEIV+NLSEAPLLVH+YAGDE +GTVV VMKAEEWAAVK RWERGEAEMPDGMIFVEQLG   EESCGCGF+GDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSG      LSM+CTHFCLAKVSSF+ETSESQLRNCWLVGN
Sbjct:    1 MAYARIGNGGTYLVHRGMLESDNNARSLSSSFPIHRDGSRRINVRTITASVSEAVTEIEKQRGGXXXXXXXXRDGREVEVTREKLDMWMKESVTEIVRNLSEAPLLVHLYAGDEGEGTVVMVMKAEEWAAVKGRWERGEAEMPDGMIFVEQLGAEAEESCGCGFDGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGXXXXXXLSMRCTHFCLAKVSSFKETSESQLRNCWLVGN 237

[Close]

BLAST of BolC9t59908H-R vs. GenBank_protein
Match: CAA7031993.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 372 bits (956), Expect = 1.300e-128
Identity = 189/235 (80.43%), Postives = 206/235 (87.66%), Query Frame = 0

Query:    1 MAYAKIGYGGTYLVHRGILE----SDNNARSLPSSFPINRDGTRRINVGTISASVAEAVSEIEKQRGGKRSGGRDRREVEVTREKLDRWMKESVTEIVKNLSEAPLLVHMYAGDEEKGTVVVMKAEEWAAVKERWERGEAEMPDGMIFVEQLGVGEEESCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSG--LSMQCTHFCLAKVSSFRETSESQLRNCWLVGN 229
            MAYAKIGY G+YLVH G+LE    SD+NAR L SSFP NRDG RR NVGTISAS+ EAV+EIEKQ+G +  GG DRR VE  REK+DRWMK SVTEIVKNLSEAPLLVH++AGD+E GTVVVMKAEEWAAVK RWE+GEAEMP+G+IFVEQLG   EESCGCGF+G DGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSG  L M+CTHFCLAKVSSFRET+ESQLRNCWLVGN
Sbjct:    1 MAYAKIGYRGSYLVHCGVLELPYGSDHNARLLSSSFPTNRDGNRRSNVGTISASMVEAVTEIEKQKGRRNRGGGDRRAVEAAREKVDRWMKVSVTEIVKNLSEAPLLVHLHAGDKEDGTVVVMKAEEWAAVKGRWEKGEAEMPEGIIFVEQLGEKSEESCGCGFDGGDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGSGLGMRCTHFCLAKVSSFRETTESQLRNCWLVGN 235

The following BLAST results are available for this feature:

BLAST of BolC9t59908H-R vs. GenBank_protein

BLAST of BolC9t59908H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
XP_013741473.1	3.750e-163	100.00	uncharacterized protein BNAC09G50070D [Brassica na...	[more]
XP_013609025.1	1.030e-160	99.12	PREDICTED: uncharacterized protein LOC106315753 [B...	[more]
KAF2537736.1	5.730e-158	96.51	hypothetical protein F2Q68_00023302 [Brassica cret...	[more]
KAF3499891.1	4.710e-157	96.07	hypothetical protein F2Q69_00045545 [Brassica cret...	[more]
XP_009122134.1	5.500e-156	95.20	uncharacterized protein LOC103846878 [Brassica rap...	[more]
XP_013715373.1	6.420e-155	94.76	uncharacterized protein LOC106419168 [Brassica nap...	[more]
XP_018444411.1	1.300e-154	94.76	PREDICTED: uncharacterized protein LOC108816333 [R...	[more]
KAG2262625.1	2.480e-147	94.32	hypothetical protein Bca52824_069704 [Brassica car...	[more]
KAF8115207.1	7.560e-133	83.97	hypothetical protein N665_0029s0050 [Sinapis alba]	[more]
CAA7031993.1	1.300e-128	80.43	unnamed protein product [Microthlaspi erraticum]	[more]

Pages

InterPro

Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35127	FAMILY NOT NAMED	coord: 23..227
None	No IPR available	PANTHER	PTHR35127:SF1	SUBFAMILY NOT NAMED	coord: 23..227

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C9	contig	C9:61427898..61428587 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Interproscan on OGS1.0	2022-03-19
Diamond on OGS1.0 vs NR	2022-03-19
Brassica oleracea HDEM OGS1.0	2018-11-02

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
BolC9t59908H-R	BolC9t59908H-R	Brassica oleracea HDEM	mRNA	C9 61427898..61428587 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>BolC9t59908H-R-P ID=BolC9t59908H-R-P|Name=BolC9t59908H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=230bp
MAYAKIGYGGTYLVHRGILESDNNARSLPSSFPINRDGTRRINVGTISAS
VAEAVSEIEKQRGGKRSGGRDRREVEVTREKLDRWMKESVTEIVKNLSEA
PLLVHMYAGDEEKGTVVVMKAEEWAAVKERWERGEAEMPDGMIFVEQLGV
GEEESCGCGFEGDDGTRAWGLVVQGKGVECGPVCYLLKTTRVGSGSGLSM
QCTHFCLAKVSSFRETSESQLRNCWLVGN.

Orthology

View orthology data for BolC9t59908H-R-P