BolC9t58234H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	BolC9t58234H-R
Unique Name	BolC9t58234H-R-P
Type	polypeptide
Organism	Brassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length	341

Homology

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BLAST of BolC9t58234H-R vs. GenBank_protein
Match: CAF1773152.1 (unnamed protein product [Brassica napus] >CDY26977.1 BnaC09g36060D [Brassica napus] >VDD32911.1 unnamed protein product [Brassica oleracea])

HSP 1 Score: 617 bits (1592), Expect = 6.320e-222
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0

Query:    1 MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGRTDNDIKNYWNTKLRKKIMSXXXXXXXXXXXAAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPNYPHEFSLEDMSSSXXXXNISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXXASSSRFISNLAENKTSSSLLQHTCLPYFYS 340
            MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGRTDNDIKNYWNTKLRKKIMSXXXXXXXXXXXAAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPNYPHEFSLEDMSSSXXXXNISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXXASSSRFISNLAENKTSSSLLQHTCLPYFYS
Sbjct:    1 MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGRTDNDIKNYWNTKLRKKIMSXXXXXXXXXXXAAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPNYPHEFSLEDMSSSXXXXNISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXXASSSRFISNLAENKTSSSLLQHTCLPYFYS 340

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BLAST of BolC9t58234H-R vs. GenBank_protein
Match: XP_013610440.1 (PREDICTED: transcription factor RAX1-like [Brassica oleracea var. oleracea])

HSP 1 Score: 609 bits (1571), Expect = 1.000e-218
Identity = 336/340 (98.82%), Postives = 336/340 (98.82%), Query Frame = 0

Query:    1 MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGRTDNDIKNYWNTKLRKKIMSXXXXXXXXXXXAAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPNYPHEFSLEDMSSSXXXXNISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXXASSSRFISNLAENKTSSSLLQHTCLPYFYS 340
            MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGRTDNDIKNYWNTKLRKKIMSXXXXXXXXXXXAAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPNYPHEFSLEDMSSSXXXXNISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXX   S FISNLAENKTSSSLLQHTCLPYFYS
Sbjct:    1 MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGRTDNDIKNYWNTKLRKKIMSXXXXXXXXXXXAAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPNYPHEFSLEDMSSSXXXXNISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXXXXXSSFISNLAENKTSSSLLQHTCLPYFYS 340

[Close]

BLAST of BolC9t58234H-R vs. GenBank_protein
Match: XP_013705873.1 (transcription factor RAX1-like [Brassica napus])

HSP 1 Score: 607 bits (1566), Expect = 5.790e-218
Identity = 335/340 (98.53%), Postives = 336/340 (98.82%), Query Frame = 0

Query:    1 MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGRTDNDIKNYWNTKLRKKIMSXXXXXXXXXXXAAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPNYPHEFSLEDMSSSXXXXNISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXXASSSRFISNLAENKTSSSLLQHTCLPYFYS 340
            MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGRTDNDIKNYWNTKLRKKIMSXXXXXXXXXXXAAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNP+YPHEFSLEDMSSSXXXXNISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXX   S FISNLAENKTSSSLLQHTCLPYFYS
Sbjct:    1 MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGRTDNDIKNYWNTKLRKKIMSXXXXXXXXXXXAAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPSYPHEFSLEDMSSSXXXXNISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXXXXXSSFISNLAENKTSSSLLQHTCLPYFYS 340

[Close]

BLAST of BolC9t58234H-R vs. GenBank_protein
Match: KAF2571552.1 (hypothetical protein F2Q70_00005647 [Brassica cretica])

HSP 1 Score: 607 bits (1565), Expect = 8.220e-218
Identity = 335/340 (98.53%), Postives = 335/340 (98.53%), Query Frame = 0

Query:    1 MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGRTDNDIKNYWNTKLRKKIMSXXXXXXXXXXXAAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPNYPHEFSLEDMSSSXXXXNISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXXASSSRFISNLAENKTSSSLLQHTCLPYFYS 340
            MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGRTDNDIKNYWNTKLRKKIMSXXXXXXXXXXXAAMATPFLNPNSHDVKRPI PSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPNYPHEFSLEDMSSSXXXXNISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXX   S FISNLAENKTSSSLLQHTCLPYFYS
Sbjct:    1 MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGRTDNDIKNYWNTKLRKKIMSXXXXXXXXXXXAAMATPFLNPNSHDVKRPIIPSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPNYPHEFSLEDMSSSXXXXNISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXXXXXSSFISNLAENKTSSSLLQHTCLPYFYS 340

[Close]

BLAST of BolC9t58234H-R vs. GenBank_protein
Match: KAF3567242.1 (hypothetical protein DY000_02018174 [Brassica cretica])

HSP 1 Score: 598 bits (1541), Expect = 3.870e-214
Identity = 333/341 (97.65%), Postives = 333/341 (97.65%), Query Frame = 0

Query:    1 MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGRTDNDIKNYWNTKLRKKIMSXXXXXXXXXXXAAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPNYPHEFSLEDMSSSXXXXN-ISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXXASSSRFISNLAENKTSSSLLQHTCLPYFYS 340
            MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGRTDNDIKNYWNTKLRKKIMSXXXXXXXXXXXAAMATPFLNPNSHDVKRPI PSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPNYPHEFSLEDMSS XXXX  ISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXX   S FISNLAENKTSSSLLQHTCLPYFYS
Sbjct:    1 MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGRTDNDIKNYWNTKLRKKIMSXXXXXXXXXXXAAMATPFLNPNSHDVKRPIIPSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPNYPHEFSLEDMSSXXXXXXXISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXXXXXSSFISNLAENKTSSSLLQHTCLPYFYS 341

[Close]

BLAST of BolC9t58234H-R vs. GenBank_protein
Match: XP_009120615.1 (transcription factor RAX1 [Brassica rapa] >XP_013665867.1 transcription factor RAX1-like [Brassica napus] >KAG5376422.1 hypothetical protein IGI04_041018 [Brassica rapa subsp. trilocularis] >RID41475.1 hypothetical protein BRARA_J01433 [Brassica rapa] >VDD18414.1 unnamed protein product [Brassica rapa])

HSP 1 Score: 577 bits (1486), Expect = 7.150e-206
Identity = 318/340 (93.53%), Postives = 326/340 (95.88%), Query Frame = 0

Query:    1 MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGRTDNDIKNYWNTKLRKKIMSXXXXXXXXXXXAAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPNYPHEFSLEDMSSSXXXXNISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXXASSSRFISNLAENKTSSSLLQHTCLPYFYS 340
            MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHL GRTDNDIKNYWNTKLRKKIMS XXXXXXXXX AAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENST SLISNINGFEADDQQIFPFFNPNYPH+FSLEDMSS+    NISGTSGFLLNHSMCDHYSNH NFSS+VNGKRSEIMM+QEEMMMIDHHIDQMT+GYNGDFTQGYYNNDINGHGDLK+MISGTXXXXXXXXXXXXXXXXXXX+    FISNLAENKTSSSLL+H CLPYFYS
Sbjct:    1 MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKIMSSXXXXXXXXX-AAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENSTTSLISNINGFEADDQQIFPFFNPNYPHDFSLEDMSSNNNN-NISGTSGFLLNHSMCDHYSNHTNFSSDVNGKRSEIMMKQEEMMMIDHHIDQMTKGYNGDFTQGYYNNDINGHGDLKQMISGTXXXXXXXXXXXXXXXXXXXS----FISNLAENKTSSSLLKHKCLPYFYS 334

[Close]

BLAST of BolC9t58234H-R vs. GenBank_protein
Match: CAF2336890.1 (unnamed protein product [Brassica napus] >CDY50326.1 BnaA10g13590D [Brassica napus])

HSP 1 Score: 576 bits (1485), Expect = 1.020e-205
Identity = 317/340 (93.24%), Postives = 326/340 (95.88%), Query Frame = 0

Query:    1 MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGRTDNDIKNYWNTKLRKKIMSXXXXXXXXXXXAAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPNYPHEFSLEDMSSSXXXXNISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXXASSSRFISNLAENKTSSSLLQHTCLPYFYS 340
            MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAA+GSRWSIIAAHL GRTDNDIKNYWNTKLRKKIMS XXXXXXXXX AAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENST SLISNINGFEADDQQIFPFFNPNYPH+FSLEDMSS+    NISGTSGFLLNHSMCDHYSNH NFSS+VNGKRSEIMM+QEEMMMIDHHIDQMT+GYNGDFTQGYYNNDINGHGDLK+MISGTXXXXXXXXXXXXXXXXXXX+    FISNLAENKTSSSLL+H CLPYFYS
Sbjct:    1 MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAVGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKIMSSXXXXXXXXX-AAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENSTTSLISNINGFEADDQQIFPFFNPNYPHDFSLEDMSSNNNN-NISGTSGFLLNHSMCDHYSNHTNFSSDVNGKRSEIMMKQEEMMMIDHHIDQMTKGYNGDFTQGYYNNDINGHGDLKQMISGTXXXXXXXXXXXXXXXXXXXS----FISNLAENKTSSSLLKHKCLPYFYS 334

[Close]

BLAST of BolC9t58234H-R vs. GenBank_protein
Match: XP_022564933.1 (transcription factor RAX1-like [Brassica napus])

HSP 1 Score: 540 bits (1390), Expect = 6.920e-191
Identity = 304/314 (96.82%), Postives = 306/314 (97.45%), Query Frame = 0

Query:   27 DYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGRTDNDIKNYWNTKLRKKIMSXXXXXXXXXXXAAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPNYPHEFSLEDMSSSXXXXNISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXXASSSRFISNLAENKTSSSLLQHTCLPYFYS 340
            DYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHL GRTDNDIKNYWNTKLRKKIMS XXXXXXXXX AAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNP+YPHEFSLEDMSS+XXXX ISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXX   S FISNLAENKTSSSLLQHTCLPYFYS
Sbjct:   45 DYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKIMSSXXXXXXXXX-AAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPSYPHEFSLEDMSSNXXXXXISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXXXXXSSFISNLAENKTSSSLLQHTCLPYFYS 357

[Close]

BLAST of BolC9t58234H-R vs. GenBank_protein
Match: XP_018445032.1 (PREDICTED: transcription factor RAX1-like [Raphanus sativus])

HSP 1 Score: 523 bits (1346), Expect = 1.340e-184
Identity = 285/340 (83.82%), Postives = 300/340 (88.24%), Query Frame = 0

Query:    1 MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGRTDNDIKNYWNTKLRKKIMSXXXXXXXXXXXAAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPNYPHEFSLEDMSSSXXXXNISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXXASSSRFISNLAENKTSSSLLQHTCLPYFYS 340
            MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHL GRTDNDIKNYWNTKLRKK+MS            A+A PF NPNS DVKRP+TPSATI   SY PYVEN TRSLI NINGFEADDQQIFPF NPNYPH+FSL DM S+    NI GTSGFLLNH++CDH+SNHN+ SSEVNGKRSEIMM+QEEMMMIDHHI QMT+GYNGDFTQGYYNN I+GHGDLK+MISG+XXXXXXXXXXXXXXXXXX    S FIS+LAENKTSSS LQH CLPYFYS
Sbjct:    1 MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLMSLSSSSHSSP---AIAYPFRNPNSQDVKRPLTPSATITLSSYTPYVENPTRSLI-NINGFEADDQQIFPFINPNYPHDFSLADMCSNNNN-NIFGTSGFLLNHNICDHFSNHNSLSSEVNGKRSEIMMKQEEMMMIDHHIGQMTKGYNGDFTQGYYNNYISGHGDLKQMISGSXXXXXXXXXXXXXXXXXX----SSFISDLAENKTSSSFLQHKCLPYFYS 331

[Close]

BLAST of BolC9t58234H-R vs. GenBank_protein
Match: KAF8102322.1 (hypothetical protein N665_0198s0035 [Sinapis alba])

HSP 1 Score: 517 bits (1332), Expect = 2.260e-182
Identity = 287/342 (83.92%), Postives = 302/342 (88.30%), Query Frame = 0

Query:    1 MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGRTDNDIKNYWNTKLRKKIMSXXXXXXXXXXXAAMATPFLNPNSHDVKRPITPSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPNYPHEFSLEDMSSSXXXXNISGTSG-FLLNHSMCDHYSNHNN-FSSEVNGKRSEIMMEQEEMMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTXXXXXXXXXXXXXXXXXXXASSSRFISNLAENKTSSSLLQHTCLPYFYS 340
            MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLP KAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHL GRTDNDIKNYWNTKLRKK+MS           AA+A+  LNPNS DVKRP+TPSATIA  SY  YVEN TRSLISNINGFEADDQQIFPF NPNYPH+F L DMS +    NI GTS  FLLNH+MCDHY++H++ FSSEVNGKRSEIMM+QEEMMMIDHHIDQMT+GYNGDFTQGYYNN I+GHGDLK+MISGTXXXXXXXXXXXXXXXXXXX  S  FISNLAENKTSSS LQH CLPYFYS
Sbjct:    1 MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPFKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLMSSSSSSIHAS--AAIASHSLNPNSQDVKRPLTPSATIALSSYTTYVENPTRSLISNINGFEADDQQIFPFINPNYPHDFPLADMSINNNN-NILGTSANFLLNHNMCDHYNDHSSSFSSEVNGKRSEIMMKQEEMMMIDHHIDQMTKGYNGDFTQGYYNNYIDGHGDLKQMISGTXXXXXXXXXXXXXXXXXXXXXS--FISNLAENKTSSSFLQHKCLPYFYS 337

The following BLAST results are available for this feature:

BLAST of BolC9t58234H-R vs. GenBank_protein

BLAST of BolC9t58234H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
CAF1773152.1	6.320e-222	100.00	unnamed protein product [Brassica napus] >CDY26977...	[more]
XP_013610440.1	1.000e-218	98.82	PREDICTED: transcription factor RAX1-like [Brassic...	[more]
XP_013705873.1	5.790e-218	98.53	transcription factor RAX1-like [Brassica napus]	[more]
KAF2571552.1	8.220e-218	98.53	hypothetical protein F2Q70_00005647 [Brassica cret...	[more]
KAF3567242.1	3.870e-214	97.65	hypothetical protein DY000_02018174 [Brassica cret...	[more]
XP_009120615.1	7.150e-206	93.53	transcription factor RAX1 [Brassica rapa] >XP_0136...	[more]
CAF2336890.1	1.020e-205	93.24	unnamed protein product [Brassica napus] >CDY50326...	[more]
XP_022564933.1	6.920e-191	96.82	transcription factor RAX1-like [Brassica napus]	[more]
XP_018445032.1	1.340e-184	83.82	PREDICTED: transcription factor RAX1-like [Raphanu...	[more]
KAF8102322.1	2.260e-182	83.92	hypothetical protein N665_0198s0035 [Sinapis alba]	[more]

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GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus

InterPro

Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 13..64 e-value: 9.0E-12 score: 55.1 coord: 67..115 e-value: 1.1E-12 score: 58.2
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..62 score: 10.882227
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 63..113 score: 9.628088
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..62 e-value: 1.91165E-9 score: 50.6518
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 71..113 e-value: 1.24064E-9 score: 51.4222
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 69..111 e-value: 5.5E-11 score: 42.5 coord: 14..62 e-value: 2.3E-13 score: 50.1
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..62 score: 16.311203
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 63..117 score: 23.256151
None	No IPR available	GENE3D	1.10.10.60		coord: 70..135 e-value: 1.4E-19 score: 71.9
None	No IPR available	GENE3D	1.10.10.60		coord: 7..68 e-value: 7.3E-19 score: 69.4
None	No IPR available	PANTHER	PTHR48000	OS09G0431300 PROTEIN	coord: 1..340
None	No IPR available	PANTHER	PTHR48000:SF18	TRANSCRIPTION FACTOR RAX1	coord: 1..340
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 12..109

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C9	contig	C9:50768678..50770400 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Interproscan on OGS1.0	2022-03-19
Blast2go on OGS1.0	2022-03-19
Diamond on OGS1.0 vs NR	2022-03-19
Brassica oleracea HDEM OGS1.0	2018-11-02

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
BolC9t58234H-R	BolC9t58234H-R	Brassica oleracea HDEM	mRNA	C9 50768678..50770400 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>BolC9t58234H-R-P ID=BolC9t58234H-R-P|Name=BolC9t58234H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=341bp
MGRAPCCDKTKVKRGPWSPEEDAKLRDYIEKYGNGGNWISLPLKAGLRRC
GKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLQGR
TDNDIKNYWNTKLRKKIMSSSSSSSSSHSSAAMATPFLNPNSHDVKRPIT
PSATIAPFSYNPYVENSTRSLISNINGFEADDQQIFPFFNPNYPHEFSLE
DMSSSNNNNNISGTSGFLLNHSMCDHYSNHNNFSSEVNGKRSEIMMEQEE
MMMIDHHIDQMTEGYNGDFTQGYYNNDINGHGDLKRMISGTGTNSNINMG
GSGSGSGSGTASSSRFISNLAENKTSSSLLQHTCLPYFYS.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Orthology

View orthology data for BolC9t58234H-R-P