BolSC49t61161H-R-P (polypeptide) Brassica oleracea HDEM
You are viewing a polypeptide, more information available on the corresponding mRNA page
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Overview
Homology
BLAST of BolSC49t61161H-R vs. GenBank_protein
Match: VDD65303.1 (unnamed protein product, partial [Brassica oleracea] >VDD65384.1 unnamed protein product, partial [Brassica oleracea] >VDD65444.1 unnamed protein product, partial [Brassica oleracea] >VDD65933.1 unnamed protein product, partial [Brassica oleracea]) HSP 1 Score: 267 bits (683), Expect = 3.150e-90 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 Query: 1 NPKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE 133
NPKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE
Sbjct: 1 NPKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE 133
BLAST of BolSC49t61161H-R vs. GenBank_protein
Match: ASY93398.1 (ribosomal protein L16 [Brassica rapa] >ASY93485.1 ribosomal protein L16 [Brassica rapa subsp. chinensis] >ASY94007.1 ribosomal protein L16 [Brassica oleracea var. capitata] >ASY94094.1 ribosomal protein L16 [Brassica oleracea var. botrytis] >ASY94181.1 ribosomal protein L16 [Brassica oleracea var. gongylodes] >ASY94268.1 ribosomal protein L16 [Brassica oleracea var. italica] >ASY94790.1 ribosomal protein L16 [Brassica juncea subsp. integrifolia]) HSP 1 Score: 267 bits (683), Expect = 3.490e-90 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 Query: 1 NPKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE 133
NPKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE
Sbjct: 4 NPKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE 136
BLAST of BolSC49t61161H-R vs. GenBank_protein
Match: YP_009177902.1 (ribosomal protein L16 [Brassica juncea] >ALK26720.1 ribosomal protein L16 [Brassica juncea]) HSP 1 Score: 267 bits (683), Expect = 3.490e-90 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 Query: 1 NPKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE 133
NPKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE
Sbjct: 4 NPKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE 136
BLAST of BolSC49t61161H-R vs. GenBank_protein
Match: YP_005089989.1 (rpl16 gene product [Brassica napus] >YP_009553804.1 ribosomal protein L16 [Brassica rapa] >YP_009564612.1 ribosomal protein L16 [Brassica oleracea] >YP_009907398.1 ribosomal protein L16 [Brassica rapa subsp. rapa] >ANW83315.1 ribosomal protein L16 [Brassica napus var. napus] >ASY93572.1 ribosomal protein L16 [Brassica rapa subsp. pekinensis] >ASY94703.1 ribosomal protein L16 [Brassica juncea subsp. integrifolia] >ASY94877.1 ribosomal protein L16 [Brassica juncea] >ACY66275.1 ribosomal protein L16 [Brassica napus]) HSP 1 Score: 267 bits (683), Expect = 3.610e-90 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0 Query: 1 NPKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE 133
NPKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE
Sbjct: 5 NPKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE 137
BLAST of BolSC49t61161H-R vs. GenBank_protein
Match: YP_009000370.1 (rpl16 protein [Arabis alpina] >YP_009353788.1 ribosomal protein L16 [Alyssum desertorum] >YP_009827391.1 ribosomal protein L16 [Arabis scabra] >AQZ25132.1 ribosomal protein L16 [Alyssum desertorum] >QIV22553.1 ribosomal protein L16 [Arabis scabra] >QIV22638.1 ribosomal protein L16 [Arabis scabra] >QIV22723.1 ribosomal protein L16 [Arabis scabra] >QIV22808.1 ribosomal protein L16 [Arabis scabra]) HSP 1 Score: 266 bits (679), Expect = 1.420e-89 Identity = 131/133 (98.50%), Postives = 133/133 (100.00%), Query Frame = 0 Query: 1 NPKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE 133
NPKRT+FRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRN+RRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE
Sbjct: 4 NPKRTRFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE 136
BLAST of BolSC49t61161H-R vs. GenBank_protein
Match: ANW47827.1 (ribosomal protein L16 [Arabidopsis thaliana] >ASM41962.1 ribosomal protein L16 [Alyssum gmelinii] >QBI37836.1 ribosomal protein L16 [Arabidopsis thaliana]) HSP 1 Score: 266 bits (679), Expect = 1.420e-89 Identity = 131/133 (98.50%), Postives = 133/133 (100.00%), Query Frame = 0 Query: 1 NPKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE 133
NPKRT+FRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRN+RRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE
Sbjct: 4 NPKRTRFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE 136
BLAST of BolSC49t61161H-R vs. GenBank_protein
Match: AKM97954.1 (ribosomal protein L16 [Brassica oleracea var. capitata] >AZQ05859.1 ribosomal protein L16 [Brassica oleracea var. italica] >AZQ05948.1 ribosomal protein L16 [Brassica oleracea var. italica]) HSP 1 Score: 265 bits (678), Expect = 1.830e-89 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 Query: 2 PKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE 133
PKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE
Sbjct: 2 PKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE 133
BLAST of BolSC49t61161H-R vs. GenBank_protein
Match: KAF8100524.1 (hypothetical protein N665_0221s0001 [Sinapis alba]) HSP 1 Score: 266 bits (679), Expect = 1.930e-89 Identity = 131/133 (98.50%), Postives = 133/133 (100.00%), Query Frame = 0 Query: 1 NPKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE 133
NPKRT+FRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRN+RRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE
Sbjct: 13 NPKRTRFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE 145
BLAST of BolSC49t61161H-R vs. GenBank_protein
Match: QNQ65450.1 (ribosomal protein L16 [Brassica rapa]) HSP 1 Score: 265 bits (678), Expect = 1.950e-89 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 Query: 2 PKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE 133
PKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE
Sbjct: 4 PKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE 135
BLAST of BolSC49t61161H-R vs. GenBank_protein
Match: ASY94355.1 (ribosomal protein L16 [Raphanus raphanistrum subsp. landra] >ASY94442.1 ribosomal protein L16 [Raphanus sativus var. raphanistroides] >ASY94529.1 ribosomal protein L16 [Raphanus sativus var. sativus] >ASY94616.1 ribosomal protein L16 [Raphanus sativus var. sativus]) HSP 1 Score: 265 bits (678), Expect = 2.020e-89 Identity = 132/133 (99.25%), Postives = 132/133 (99.25%), Query Frame = 0 Query: 1 NPKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIISE 133
NPKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFII E
Sbjct: 4 NPKRTKFRKQHRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNIRRGGKIWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFIICE 136 The following BLAST results are available for this feature:
BLAST of BolSC49t61161H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR) Total hits: 20
Pagesback to topGO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BolSC49t61161H-R-P ID=BolSC49t61161H-R-P|Name=BolSC49t61161H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=134bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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