BolSC49t61143H-R-P (polypeptide) Brassica oleracea HDEM
You are viewing a polypeptide, more information available on the corresponding mRNA page
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Overview
Homology
BLAST of BolSC49t61143H-R vs. GenBank_protein
Match: VDD65915.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 107 bits (266), Expect = 6.390e-29 Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0 Query: 1 MILEHVLVLSAYLFFLIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFFFLIIPN 59
MILEHVLVLSAYLFFLIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFFFLIIPN
Sbjct: 1 MILEHVLVLSAYLFFLIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFFFLIIPN 59
BLAST of BolSC49t61143H-R vs. GenBank_protein
Match: VDD65318.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 94.0 bits (232), Expect = 9.410e-24 Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 0 Query: 1 MILEHVLVLSAYLFFLIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFFFLIIPN 59
MILEHVLVLSAYLF LIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFF LIIPN
Sbjct: 1 MILEHVLVLSAYLF-LIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFF-LIIPN 57
BLAST of BolSC49t61143H-R vs. GenBank_protein
Match: VDD65464.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 91.7 bits (226), Expect = 7.570e-23 Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0 Query: 1 MILEHVLVLSAYLFFLIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFFFLIIPN 59
MILEHVLVLSAYLF LIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADF LIIPN
Sbjct: 1 MILEHVLVLSAYLF-LIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADF--LIIPN 56
BLAST of BolSC49t61143H-R vs. GenBank_protein
Match: VDD26377.1 (unnamed protein product [Brassica rapa]) HSP 1 Score: 90.9 bits (224), Expect = 1.530e-22 Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0 Query: 1 MILEHVLVLSAYLFFLIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFFFLIIPN 59
MILEHVLVLSAYLF LIGLYGLITSRNMVRALMCLELILNAVNMNLVTFA FFLIIPN
Sbjct: 1 MILEHVLVLSAYLF-LIGLYGLITSRNMVRALMCLELILNAVNMNLVTFA--FFLIIPN 56
BLAST of BolSC49t61143H-R vs. GenBank_protein
Match: CAF1728838.1 (unnamed protein product [Brassica napus]) HSP 1 Score: 89.7 bits (221), Expect = 3.980e-22 Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0 Query: 1 MILEHVLVLSAYLFFLIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFF 53
MILEHVLVLSAYLF LIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFF
Sbjct: 1 MILEHVLVLSAYLF-LIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFF 52
BLAST of BolSC49t61143H-R vs. GenBank_protein
Match: VDD65278.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 89.7 bits (221), Expect = 5.660e-22 Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0 Query: 1 MILEHVLVLSAYLFFLIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFF 53
MILEHVLVLSAYLF LIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFF
Sbjct: 1 MILEHVLVLSAYLF-LIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFF 52
BLAST of BolSC49t61143H-R vs. GenBank_protein
Match: VDD25508.1 (unnamed protein product [Brassica rapa]) HSP 1 Score: 89.7 bits (221), Expect = 5.810e-22 Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0 Query: 1 MILEHVLVLSAYLFFLIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFF 53
MILEHVLVLSAYLF LIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFF
Sbjct: 1 MILEHVLVLSAYLF-LIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFF 52
BLAST of BolSC49t61143H-R vs. GenBank_protein
Match: VDD26824.1 (unnamed protein product [Brassica rapa]) HSP 1 Score: 89.7 bits (221), Expect = 6.450e-22 Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0 Query: 1 MILEHVLVLSAYLFFLIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFF 53
MILEHVLVLSAYLF LIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFF
Sbjct: 1 MILEHVLVLSAYLF-LIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFF 52
BLAST of BolSC49t61143H-R vs. GenBank_protein
Match: VDD65681.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 89.7 bits (221), Expect = 6.630e-22 Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0 Query: 1 MILEHVLVLSAYLFFLIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFF 53
MILEHVLVLSAYLF LIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFF
Sbjct: 1 MILEHVLVLSAYLF-LIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFF 52
BLAST of BolSC49t61143H-R vs. GenBank_protein
Match: YP_005090005.1 (ndhE gene product [Brassica napus] >YP_009177918.1 NADH-plastoquinone oxidoreductase subunit 4L [Brassica juncea] >YP_009553820.1 NADH dehydrogenase subunit 4L [Brassica rapa] >YP_009564628.1 NADH dehydrogenase subunit 4L [Brassica oleracea] >YP_009907414.1 NdhE [Brassica rapa subsp. rapa] >AKM97971.1 NdhE [Brassica oleracea var. capitata] >ANW83331.1 NdhE [Brassica napus var. napus] >ASY93501.1 NdhE [Brassica rapa subsp. chinensis] >ASY93588.1 NdhE [Brassica rapa subsp. pekinensis] >ASY94110.1 NdhE [Brassica oleracea var. botrytis] >ASY94197.1 NdhE [Brassica oleracea var. gongylodes] >ASY94284.1 NdhE [Brassica oleracea var. italica] >ASY94719.1 NdhE [Brassica juncea subsp. integrifolia]) HSP 1 Score: 89.7 bits (221), Expect = 1.470e-21 Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0 Query: 1 MILEHVLVLSAYLFFLIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFF 53
MILEHVLVLSAYLF LIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFF
Sbjct: 1 MILEHVLVLSAYLF-LIGLYGLITSRNMVRALMCLELILNAVNMNLVTFADFF 52 The following BLAST results are available for this feature:
BLAST of BolSC49t61143H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR) Total hits: 20 ZOOMx 1POSITION0
Pagesback to topGO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BolSC49t61143H-R-P ID=BolSC49t61143H-R-P|Name=BolSC49t61143H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=60bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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