BolC9t59866H-R-P (polypeptide) Brassica oleracea HDEM
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of BolC9t59866H-R vs. GenBank_protein
Match: XP_013611870.1 (PREDICTED: RING-H2 finger protein ATL43 [Brassica oleracea var. oleracea] >VDD34543.1 unnamed protein product [Brassica oleracea]) HSP 1 Score: 748 bits (1931), Expect = 3.420e-271 Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 0 Query: 1 MSSPSSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXLXXXSPLQRHNVTSSFMPGIAVVIAVLTAVFSLTFLILLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXXVGRKTSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNEVRTSSSSKSIPISIRRSLDSSLRINDGEEKTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV 411 MSSPSSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXLXXXSPLQRHNVTSSFMPGIAVVIAVLTAVFSLTFLILLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXXVGRKTSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNEVRTSSSSKSIPISIRRSLDSSLRINDGEEKTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV Sbjct: 1 MSSPSSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXLXXXSPLQRHNVTSSFMPGIAVVIAVLTAVFSLTFLILLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXXVGRKTSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNEVRTSSSSKSIPISIRRSLDSSLRINDGEEKTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV 411
BLAST of BolC9t59866H-R vs. GenBank_protein
Match: KAF3501112.1 (hypothetical protein F2Q69_00045494 [Brassica cretica]) HSP 1 Score: 744 bits (1920), Expect = 1.620e-269 Identity = 409/411 (99.51%), Postives = 409/411 (99.51%), Query Frame = 0 Query: 1 MSSPSSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXLXXXSPLQRHNVTSSFMPGIAVVIAVLTAVFSLTFLILLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXXVGRKTSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNEVRTSSSSKSIPISIRRSLDSSLRINDGEEKTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV 411 MSSPSSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXLXXXSPLQRHNVTSSFMPGIAVVIAVLTAVFSLTFLILLYVKHCKRRNGYVNDTQRFAT RYYGGGGXXXXXVGRK SGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNEVRTSSSSKSIPISIRRSLDSSLRINDGEEKTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV Sbjct: 1 MSSPSSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXLXXXSPLQRHNVTSSFMPGIAVVIAVLTAVFSLTFLILLYVKHCKRRNGYVNDTQRFATLRYYGGGGXXXXXVGRKNSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNEVRTSSSSKSIPISIRRSLDSSLRINDGEEKTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV 411
BLAST of BolC9t59866H-R vs. GenBank_protein
Match: XP_013728514.1 (RING-H2 finger protein ATL43-like [Brassica napus] >CAF1790106.1 unnamed protein product [Brassica napus]) HSP 1 Score: 743 bits (1919), Expect = 2.390e-269 Identity = 411/412 (99.76%), Postives = 411/412 (99.76%), Query Frame = 0 Query: 1 MSSPSSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXLXXXSPLQRHNVTSSFMPGIAVVIAVLTAVFSLTFLILLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXXVGRKTSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXX-TGSTRFDFVSRISGRHSSAGERASRLNEVRTSSSSKSIPISIRRSLDSSLRINDGEEKTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV 411 MSSPSSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXLXXXSPLQRHNVTSSFMPGIAVVIAVLTAVFSLTFLILLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXXVGRKTSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXX TGSTRFDFVSRISGRHSSAGERASRLNEVRTSSSSKSIPISIRRSLDSSLRINDGEEKTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV Sbjct: 1 MSSPSSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXLXXXSPLQRHNVTSSFMPGIAVVIAVLTAVFSLTFLILLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXXVGRKTSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNEVRTSSSSKSIPISIRRSLDSSLRINDGEEKTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV 412
BLAST of BolC9t59866H-R vs. GenBank_protein
Match: KAF2539817.1 (hypothetical protein F2Q68_00023268 [Brassica cretica] >KAF3566161.1 hypothetical protein DY000_02019700 [Brassica cretica]) HSP 1 Score: 737 bits (1902), Expect = 9.300e-267 Identity = 408/412 (99.03%), Postives = 408/412 (99.03%), Query Frame = 0 Query: 1 MSSPSSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXLXXXSPLQRHNVTSSFMPGIAVVIAVLTAVFSLTFLILLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXXVGRKTSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNEVRTSSSSKSIPISIRRSLDSSLRINDGEE-KTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV 411 MSSPSSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXLXXXSPLQRHNVTSSFMPGIAVVIAVLTAVFSLTFLILLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXX RK SGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNEVRTSSSSKSIPISIRRSLDSSLRINDGEE KTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV Sbjct: 1 MSSPSSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXLXXXSPLQRHNVTSSFMPGIAVVIAVLTAVFSLTFLILLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXXXXRKNSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNEVRTSSSSKSIPISIRRSLDSSLRINDGEEEKTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV 412
BLAST of BolC9t59866H-R vs. GenBank_protein
Match: RID42775.1 (hypothetical protein BRARA_J02636 [Brassica rapa]) HSP 1 Score: 698 bits (1801), Expect = 1.680e-251 Identity = 388/410 (94.63%), Postives = 393/410 (95.85%), Query Frame = 0 Query: 3 SPSSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXLXXXSPLQRHNVTSSFMPGIAVVIAVLTAVFSLTFLILLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXXVGRKTSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNEVRTSSSSKSIPISIRRSLDSSLRINDGEE-KTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV 411 S +SSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXX XXXSPLQRHNVTSSFMPGIAVVIAVLT VFSLTFL+LLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXX GRK SGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFD VSRISGRHSSAGERASRLN+V+T SS RRSLDSSLRINDGEE KT+SVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSA SAV Sbjct: 2 SSASSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXXXXXSPLQRHNVTSSFMPGIAVVIAVLTVVFSLTFLLLLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXXXGRKNSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDLVSRISGRHSSAGERASRLNDVKTLSS-------FRRSLDSSLRINDGEEEKTESVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSAGSAV 404
BLAST of BolC9t59866H-R vs. GenBank_protein
Match: VDD20865.1 (unnamed protein product [Brassica rapa]) HSP 1 Score: 689 bits (1779), Expect = 3.370e-248 Identity = 384/410 (93.66%), Postives = 385/410 (93.90%), Query Frame = 0 Query: 3 SPSSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXLXXXSPLQRHNVTSSFMPGIAVVIAVLTAVFSLTFLILLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXXVGRKTSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNEVRTSSSSKSIPISIRRSLDSSLRINDGEE-KTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV 411 S SSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXX XXXSPLQRHNVTSSFMPGIAVVIAVLT VFSLTFL+LLYVKHCKRRNGYVN TQRFATS GGG VGRK SGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNEVR SS RRSLDSSLRINDGEE KTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV Sbjct: 2 SSSSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXXXXXSPLQRHNVTSSFMPGIAVVIAVLTVVFSLTFLLLLYVKHCKRRNGYVNQTQRFATSH---GGGYGGVGVGRKNSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNEVRKFSS-------FRRSLDSSLRINDGEEEKTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV 401
BLAST of BolC9t59866H-R vs. GenBank_protein
Match: XP_013715689.1 (RING-H2 finger protein ATL43-like [Brassica napus]) HSP 1 Score: 689 bits (1778), Expect = 4.780e-248 Identity = 383/410 (93.41%), Postives = 385/410 (93.90%), Query Frame = 0 Query: 3 SPSSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXLXXXSPLQRHNVTSSFMPGIAVVIAVLTAVFSLTFLILLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXXVGRKTSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNEVRTSSSSKSIPISIRRSLDSSLRINDGEE-KTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV 411 S SSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXX XXXSPLQRHNVTSSFMPGIAVVIAVLT VFSLTFL+LLYVKHCKRRNGYVN TQRFATS GGG VGRK SGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFH+ECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNEVR SS RRSLDSSLRINDGEE KTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV Sbjct: 2 SSSSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXXXXXSPLQRHNVTSSFMPGIAVVIAVLTVVFSLTFLLLLYVKHCKRRNGYVNQTQRFATSH---GGGYGGVGVGRKNSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHIECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNEVRKFSS-------FRRSLDSSLRINDGEEEKTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV 401
BLAST of BolC9t59866H-R vs. GenBank_protein
Match: CAF2359044.1 (unnamed protein product [Brassica napus]) HSP 1 Score: 681 bits (1757), Expect = 8.130e-245 Identity = 380/409 (92.91%), Postives = 383/409 (93.64%), Query Frame = 0 Query: 3 SPSSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXLXXXSPLQRHNVTSSFMPGIAVVIAVLTAVFSLTFLILLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXXVGRKTSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNEVRTSSSSKSIPISIRRSLDSSLRINDGEEKTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV 411 S SSSLLLVSLLSLFLN+SLADNDRYNTT XX XXXSPLQRHNVTSSFMPGIAVVIAVLT VFSLTFL+LLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXX GRK SGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLN+VR SS RRSLDSSLRINDGEEKTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVI GRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV Sbjct: 2 SSSSSLLLVSLLSLFLNSSLADNDRYNTTXXXXXXXXXXXXXXXXSPLQRHNVTSSFMPGIAVVIAVLTVVFSLTFLLLLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXXXGRKNSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNDVRKFSS-------FRRSLDSSLRINDGEEKTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVISGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV 403
BLAST of BolC9t59866H-R vs. GenBank_protein
Match: XP_033137777.1 (RING-H2 finger protein ATL43 [Brassica rapa]) HSP 1 Score: 679 bits (1751), Expect = 6.920e-244 Identity = 381/410 (92.93%), Postives = 384/410 (93.66%), Query Frame = 0 Query: 3 SPSSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXLXXXSPLQRHNVTSSFMPGIAVVIAVLTAVFSLTFLILLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXXVGRKTSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNEVRTSSSSKSIPISIRRSLDSSLRINDGEE-KTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV 411 S SSSLLLVSLLSLFLN+SLADNDRYNTT XX XXXSPLQRHNVTSSFMPGIAVVIAVLT VFSLTFL+LLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXX GRK SGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLN+VR SS RRSLDSSLRINDGEE KTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV Sbjct: 2 SSSSSLLLVSLLSLFLNSSLADNDRYNTTXXXXXXXXXXXXXXXXSPLQRHNVTSSFMPGIAVVIAVLTVVFSLTFLLLLYVKHCKRRNGYVNDTQRFATSRYYGGGGXXXXXXGRKNSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXXTGSTRFDFVSRISGRHSSAGERASRLNDVRKLSS-------FRRSLDSSLRINDGEEEKTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV 404
BLAST of BolC9t59866H-R vs. GenBank_protein
Match: KAF8115166.1 (hypothetical protein N665_0029s0012 [Sinapis alba]) HSP 1 Score: 676 bits (1743), Expect = 1.480e-242 Identity = 378/417 (90.65%), Postives = 384/417 (92.09%), Query Frame = 0 Query: 2 SSPSSS-LLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPXXLXXXSPLQRHNVTSSFMPGIAVVIAVLTAVFSLTFLILLYVKHCKRRNG--YVNDTQRFATSRY---YGGGGXXXXXVGRKTSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNNXXXXXXXXXX-TGSTRFDFVSRISGRHSSAGERASRLNEVRTSSSSKSIPISIRRSLDSSLRINDGEEKTDSVAVAVGCFDRNQQRKDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILSDCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV 411 SSPSSS LLLVSLLSLFLN SLADNDRYNTTAVVIMNPTT L SPLQRH +TSSFMPGIAVVIAVLTAVFSLTFL+LLYVKHCKRRNG YVN TQRFATSRY YGGGG VGRK SGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSN XXXXXXXX TGST FDFVSRISGRHSSAGERASRLNEVRTSSSSKS PIS RRSLDSSLRINDG+EKT+SVAV GCFDR+Q RKDGLLLN NRESFEARFEHRIIISGGNRDQRWSEVRP+DLLYLRSEMILSDCRKLAAAEDGREVI GRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV Sbjct: 3 SSPSSSSLLLVSLLSLFLNTSLADNDRYNTTAVVIMNPTTSPPLPPPSPLQRHKITSSFMPGIAVVIAVLTAVFSLTFLLLLYVKHCKRRNGSGYVNHTQRFATSRYGGGYGGGG-----VGRKNSGIDRSVIESLPVFRFGALSGHKEGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLISDCNSWFELRLSNRQEXXXXXXXXXTGSTGFDFVSRISGRHSSAGERASRLNEVRTSSSSKSNPISFRRSLDSSLRINDGDEKTESVAV--GCFDRSQ-RKDGLLLNPNRESFEARFEHRIIISGGNRDQRWSEVRPSDLLYLRSEMILSDCRKLAAAEDGREVISGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLAWSHRPSASSAV 411 The following BLAST results are available for this feature:
BLAST of BolC9t59866H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR) Total hits: 20 ZOOMx 1POSITION0
Pagesback to topGO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BolC9t59866H-R-P ID=BolC9t59866H-R-P|Name=BolC9t59866H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=412bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
Orthology
View orthology data for BolC9t59866H-R-P
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