BolC9t59866H-R (mRNA) Brassica oleracea HDEM

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	BolC9t59866H-R
Unique Name	BolC9t59866H-R
Type	mRNA
Organism	Brassica oleracea HDEM (cv. HDEM, Wild cabbage)

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at C9:61241225..61242460-
coding sequence from alignment at C9:61241225..61242460-

spliced messenger RNA

>BolC9t59866H-R ID=BolC9t59866H-R|Name=BolC9t59866H-R|organism=Brassica oleracea HDEM|type=mRNA|length=1236bp|location=Sequence derived from alignment at C9:61241225..61242460- (Brassica oleracea HDEM)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCTTCTCCTTCTTCCTCGTTACTTCTTGTTTCTCTCCTCTCCCTCTT
CCTCAACGCCTCACTCGCAGACAATGATCGTTACAACACCACGGCGGTCG
TGATAATGAACCCAACAACACCACCGCCTCTCCCGCCGCCTTCTCCACTT
CAACGGCATAACGTCACTTCCTCTTTCATGCCCGGAATCGCCGTAGTCAT
CGCTGTCCTCACCGCCGTCTTCTCCCTCACGTTCTTGATCCTCCTCTACG
TCAAACACTGCAAACGACGCAACGGATACGTCAACGATACGCAGCGTTTC
GCAACGTCAAGATACTACGGAGGAGGAGGTTACGGTGGAGGCGGAGTAGG
GAGGAAAACCTCCGGTATAGACCGGTCTGTGATCGAATCTTTACCGGTTT
TCCGGTTTGGTGCACTGAGCGGTCACAAGGAAGGGCTAGAGTGCGCCGTG
TGCTTGGCCCGGTTCGAACCGACGGAAGTCTTGAGGCTATTGCCGAAATG
CAAACACGCTTTCCACGTAGAGTGCGTTGACACGTGGCTAGACGCGCACT
CCACTTGCCCGCTTTGCCGTTACCGGGTCGACCCGGAAGATATCCTCTTG
ATCAGTGATTGCAACTCGTGGTTCGAGCTCCGTTTATCTAATAACCGTCG
AGAAGAATCTAATAATAATAATAATACCGGTTCGACCCGGTTTGATTTCG
TGAGTCGTATCTCCGGTCGGCATTCATCGGCCGGAGAACGCGCGAGTCGA
CTCAACGAAGTTAGAACGTCTTCTTCGTCTAAATCGATTCCCATTTCGAT
TAGGAGGTCGCTCGATAGCTCTCTGAGGATCAACGACGGCGAGGAGAAAA
CGGACTCCGTCGCTGTCGCCGTCGGGTGTTTCGATCGGAATCAACAGAGG
AAAGACGGATTGTTGCTTAATTCGAACCGGGAAAGCTTCGAGGCGAGGTT
CGAGCACCGGATAATAATCTCCGGCGGGAATCGAGATCAGAGATGGAGCG
AGGTGAGGCCGGCTGATCTTCTCTACCTCCGATCGGAGATGATTCTGAGT
GATTGCCGGAAGCTAGCTGCGGCGGAGGATGGCAGAGAGGTGATTGGTGG
GAGAAGCGTGTCGGAGTTAACGAGCATTGATAGACGGAGGAGATGGGGAG
GAGAGCCGAGACAACGACAAGCCACGGCGGTGATCTCGAGATGGCTCGCT
TGGTCCCACCGTCCCTCCGCTTCCAGCGCTGTTTAA

protein sequence of BolC9t59866H-R

>BolC9t59866H-R-P ID=BolC9t59866H-R-P|Name=BolC9t59866H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=412bp
MSSPSSSLLLVSLLSLFLNASLADNDRYNTTAVVIMNPTTPPPLPPPSPL
QRHNVTSSFMPGIAVVIAVLTAVFSLTFLILLYVKHCKRRNGYVNDTQRF
ATSRYYGGGGYGGGGVGRKTSGIDRSVIESLPVFRFGALSGHKEGLECAV
CLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILL
ISDCNSWFELRLSNNRREESNNNNNTGSTRFDFVSRISGRHSSAGERASR
LNEVRTSSSSKSIPISIRRSLDSSLRINDGEEKTDSVAVAVGCFDRNQQR
KDGLLLNSNRESFEARFEHRIIISGGNRDQRWSEVRPADLLYLRSEMILS
DCRKLAAAEDGREVIGGRSVSELTSIDRRRRWGGEPRQRQATAVISRWLA
WSHRPSASSAV.

mRNA from alignment at C9:61241225..61242460-

Legend: CDSpolypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>BolC9t59866H-R ID=BolC9t59866H-R|Name=BolC9t59866H-R|organism=Brassica oleracea HDEM|type=mRNA|length=1236bp|location=Sequence derived from alignment at C9:61241225..61242460- (Brassica oleracea HDEM)
ATGTCTTCTCCTTCTTCCTCGTTACTTCTTGTTTCTCTCCTCTCCCTCTT
CCTCAACGCCTCACTCGCAGACAATGATCGTTACAACACCACGGCGGTCG
TGATAATGAACCCAACAACACCACCGCCTCTCCCGCCGCCTTCTCCACTT
CAACGGCATAACGTCACTTCCTCTTTCATGCCCGGAATCGCCGTAGTCAT
CGCTGTCCTCACCGCCGTCTTCTCCCTCACGTTCTTGATCCTCCTCTACG
TCAAACACTGCAAACGACGCAACGGATACGTCAACGATACGCAGCGTTTC
GCAACGTCAAGATACTACGGAGGAGGAGGTTACGGTGGAGGCGGAGTAGG
GAGGAAAACCTCCGGTATAGACCGGTCTGTGATCGAATCTTTACCGGTTT
TCCGGTTTGGTGCACTGAGCGGTCACAAGGAAGGGCTAGAGTGCGCCGTG
TGCTTGGCCCGGTTCGAACCGACGGAAGTCTTGAGGCTATTGCCGAAATG
CAAACACGCTTTCCACGTAGAGTGCGTTGACACGTGGCTAGACGCGCACT
CCACTTGCCCGCTTTGCCGTTACCGGGTCGACCCGGAAGATATCCTCTTG
ATCAGTGATTGCAACTCGTGGTTCGAGCTCCGTTTATCTAATAACCGTCG
AGAAGAATCTAATAATAATAATAATACCGGTTCGACCCGGTTTGATTTCG
TGAGTCGTATCTCCGGTCGGCATTCATCGGCCGGAGAACGCGCGAGTCGA
CTCAACGAAGTTAGAACGTCTTCTTCGTCTAAATCGATTCCCATTTCGAT
TAGGAGGTCGCTCGATAGCTCTCTGAGGATCAACGACGGCGAGGAGAAAA
CGGACTCCGTCGCTGTCGCCGTCGGGTGTTTCGATCGGAATCAACAGAGG
AAAGACGGATTGTTGCTTAATTCGAACCGGGAAAGCTTCGAGGCGAGGTT
CGAGCACCGGATAATAATCTCCGGCGGGAATCGAGATCAGAGATGGAGCG
AGGTGAGGCCGGCTGATCTTCTCTACCTCCGATCGGAGATGATTCTGAGT
GATTGCCGGAAGCTAGCTGCGGCGGAGGATGGCAGAGAGGTGATTGGTGG
GAGAAGCGTGTCGGAGTTAACGAGCATTGATAGACGGAGGAGATGGGGAG
GAGAGCCGAGACAACGACAAGCCACGGCGGTGATCTCGAGATGGCTCGCT
TGGTCCCACCGTCCCTCCGCTTCCAGCGCTGTTTAA

Coding sequence (CDS) from alignment at C9:61241225..61242460-

>BolC9t59866H-R ID=BolC9t59866H-R|Name=BolC9t59866H-R|organism=Brassica oleracea HDEM|type=CDS|length=1236bp|location=Sequence derived from alignment at C9:61241225..61242460- (Brassica oleracea HDEM)
ATGTCTTCTCCTTCTTCCTCGTTACTTCTTGTTTCTCTCCTCTCCCTCTT
CCTCAACGCCTCACTCGCAGACAATGATCGTTACAACACCACGGCGGTCG
TGATAATGAACCCAACAACACCACCGCCTCTCCCGCCGCCTTCTCCACTT
CAACGGCATAACGTCACTTCCTCTTTCATGCCCGGAATCGCCGTAGTCAT
CGCTGTCCTCACCGCCGTCTTCTCCCTCACGTTCTTGATCCTCCTCTACG
TCAAACACTGCAAACGACGCAACGGATACGTCAACGATACGCAGCGTTTC
GCAACGTCAAGATACTACGGAGGAGGAGGTTACGGTGGAGGCGGAGTAGG
GAGGAAAACCTCCGGTATAGACCGGTCTGTGATCGAATCTTTACCGGTTT
TCCGGTTTGGTGCACTGAGCGGTCACAAGGAAGGGCTAGAGTGCGCCGTG
TGCTTGGCCCGGTTCGAACCGACGGAAGTCTTGAGGCTATTGCCGAAATG
CAAACACGCTTTCCACGTAGAGTGCGTTGACACGTGGCTAGACGCGCACT
CCACTTGCCCGCTTTGCCGTTACCGGGTCGACCCGGAAGATATCCTCTTG
ATCAGTGATTGCAACTCGTGGTTCGAGCTCCGTTTATCTAATAACCGTCG
AGAAGAATCTAATAATAATAATAATACCGGTTCGACCCGGTTTGATTTCG
TGAGTCGTATCTCCGGTCGGCATTCATCGGCCGGAGAACGCGCGAGTCGA
CTCAACGAAGTTAGAACGTCTTCTTCGTCTAAATCGATTCCCATTTCGAT
TAGGAGGTCGCTCGATAGCTCTCTGAGGATCAACGACGGCGAGGAGAAAA
CGGACTCCGTCGCTGTCGCCGTCGGGTGTTTCGATCGGAATCAACAGAGG
AAAGACGGATTGTTGCTTAATTCGAACCGGGAAAGCTTCGAGGCGAGGTT
CGAGCACCGGATAATAATCTCCGGCGGGAATCGAGATCAGAGATGGAGCG
AGGTGAGGCCGGCTGATCTTCTCTACCTCCGATCGGAGATGATTCTGAGT
GATTGCCGGAAGCTAGCTGCGGCGGAGGATGGCAGAGAGGTGATTGGTGG
GAGAAGCGTGTCGGAGTTAACGAGCATTGATAGACGGAGGAGATGGGGAG
GAGAGCCGAGACAACGACAAGCCACGGCGGTGATCTCGAGATGGCTCGCT
TGGTCCCACCGTCCCTCCGCTTCCAGCGCTGTTTAA