BolC9t59092H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19
ZOOM
x 1
POSITION
0
MSSIVSRARSSSLPNFLAWRALGFRTICSGGLGIAPSSSPPASAGIKILESFKEEFEVGSRVVTLETGKIARFANGSVVLGMDETKVLSTVTCAKSKSPGDFLPLTVDYQEKMFAQGLIPNTYMRREGAPKERELLCGRLIDRPIRPLFPSGFYHEVQIMANVLSSDGKQDPDILAANAASAALMLSDVPWGGPIGVIRLGRIGGQIVVNPTMDELSSSDLHLIYACTRDKTMMVDVQAREITEKDLAAALRLAHPEAVKYIDPQIRLAAKAGKQKKEYKLSMLSEKTLEKVTDLAAERIVSVFTDPSRGKFERGEALENIGKDVEKVFEEEGDQESLSILPKAVDTVRKKIVRSRMISEGFRVDGRHLDEVRPIYCESHHLPALHGSALFSRGDTQVLCTITLGAPGDAQRLDSLVGQPKKKFMLHYTFPPFCTDEVGKKLGLNRREVGHGTLAEKALLAVMPPEEDFPYTVRINSEVMASDGSTSMASVCGGSMALMDAGIPLRAHVAGVSVGLVTDVDPSSGEIKDYRIVTDILGLEDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIVCESLENARKARLQILDHMEREINSPRDQQCRLATLKYTNDALRNLIGPMGALKRKIEEETGARLSIDDGTLTIVAKNQAVMDKAQEKVDYIIGREIVVGGVYKGTVTSIKEYGAFVEFNGGQQGLLHMSELSHEPVSKVSDVLHIGKYITMMCIDSDVRGNIKLSLKALLPKPTSRPEKLPVVKEAVSVETSSFGEAVASLPSVVEPPQKSKLAVPAVVIRTAVECDDAEKSSHVDKNTKPKRAATVKPDRKLKSTASKQTVKEDETLSSTATEESRDDCGETLTQENKLNYTSLENNSNIVSSSKGKKPSRKEKQSDNEAGESPSISARKLKIGTEMTAKVHQIRTHGLVLDLGGGIRGMYKFEGDEETEFEIGDTLQVKCTSFSSKGIPVMALVDEDDV.100200300400500600700800900Expect = 3.0E-19 / Score = 79.9Expect = 0.74 / Score = 18.9Expect = 5.9E-20 / Score = 72.1Expect = 5.9E-23 / Score = 81.8Expect = 1.7E-77 / Score = 261.8Expect = 5.7E-119 / Score = 398.8Expect = 4.1E-239 / Score = 793.5Score = Score = 25.219839Expect = 2.3E-11 / Score = 43.6Expect = 1.3E-10 / Score = 41.5Score = 18.356241Expect = 1.3E-20 / Score = 75.3Score = Score = Score = Score = Score = Score = 8.219245Expect = 6.38163E-26 / Score = 99.5392Expect = 4.74669E-116 / Score = 353.361Expect = 1.42822E-139 / Score = 414.251Expect = 7.2E-9 / Score = 37.2Score = Expect = 3.4E-18 / Score = 65.9Score = Score = Score = Score = Score = Score = Score = SequenceSM00316PF01138G3DSA:3.30.230.70G3DSA:3.30.230.70TIGR03591PTHR11252MF_01595PF03725PF00575PS50126G3DSA:2.40.50.140mobidb-litemobidb-litemobidb-litemobidb-litePTHR11252:SF0PS50084cd04472cd11363cd11364G3DSA:3.30.1370.10SSF54791PF03726SSF55666SSF55666SSF54211SSF54211SSF46915SSF50249SSF50249
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 671..741
e-value: 3.0E-19
score: 79.9
coord: 907..970
e-value: 0.74
score: 18.9
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 371..504
e-value: 5.9E-23
score: 81.8
coord: 61..190
e-value: 5.9E-20
score: 72.1
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 49..281
e-value: 1.7E-77
score: 261.8
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 282..607
e-value: 5.7E-119
score: 398.8
IPR012162Polyribonucleotide nucleotidyltransferaseTIGRFAMTIGR03591TIGR03591coord: 58..742
e-value: 4.1E-239
score: 793.5
IPR012162Polyribonucleotide nucleotidyltransferasePANTHERPTHR11252POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASEcoord: 43..807
IPR012162Polyribonucleotide nucleotidyltransferaseHAMAPMF_01595PNPasecoord: 50..744
score: 25.219839
IPR015847Exoribonuclease, phosphorolytic domain 2PFAMPF03725RNase_PH_Ccoord: 193..255
e-value: 2.3E-11
score: 43.6
IPR003029S1 domainPFAMPF00575S1coord: 672..741
e-value: 1.3E-10
score: 41.5
IPR003029S1 domainPROSITEPS50126S1coord: 673..741
score: 18.356241
NoneNo IPR availableGENE3D2.40.50.140coord: 671..743
e-value: 1.3E-20
score: 75.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 842..858
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 859..880
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 802..835
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 802..904
NoneNo IPR availablePANTHERPTHR11252:SF0POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE 1, MITOCHONDRIALcoord: 43..807
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 604..662
score: 8.219245
NoneNo IPR availableCDDcd04472S1_PNPasecoord: 673..739
e-value: 6.38163E-26
score: 99.5392
NoneNo IPR availableCDDcd11363RNase_PH_PNPase_1coord: 52..279
e-value: 4.74669E-116
score: 353.361
NoneNo IPR availableCDDcd11364RNase_PH_PNPase_2coord: 371..599
e-value: 1.42822E-139
score: 414.251
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 608..666
e-value: 7.2E-9
score: 37.2
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 607..667
IPR015848Polyribonucleotide nucleotidyltransferase, RNA-binding domainPFAMPF03726PNPasecoord: 289..368
e-value: 3.4E-18
score: 65.9
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 184..277
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 498..601
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 348..547
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 48..190
IPR036456Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamilySUPERFAMILY46915Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3coord: 272..374
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 662..746
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 894..961