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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
Feature Name | Unique Name | Species | Type | Position |
BnaA01G0046800WE | BnaA01G0046800WE | Brassica napus Westar | gene | westarv0_A01 2951276..2952426 - |
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
BnaA01T0046800WE.exon4 | BnaA01T0046800WE.exon4 | Brassica napus Westar | exon | westarv0_A01 2951276..2951602 - |
BnaA01T0046800WE.exon3 | BnaA01T0046800WE.exon3 | Brassica napus Westar | exon | westarv0_A01 2951686..2951853 - |
BnaA01T0046800WE.exon2 | BnaA01T0046800WE.exon2 | Brassica napus Westar | exon | westarv0_A01 2952033..2952206 - |
BnaA01T0046800WE.exon1 | BnaA01T0046800WE.exon1 | Brassica napus Westar | exon | westarv0_A01 2952289..2952426 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
cds.BnaA01T0046800WE | cds.BnaA01T0046800WE | Brassica napus Westar | CDS | westarv0_A01 2952289..2952426 - |
Sequences
The following sequences are available for this feature:
spliced messenger RNA >BnaA01T0046800WE ID=BnaA01T0046800WE|Name=BnaA01T0046800WE|organism=Brassica napus Westar|type=mRNA|length=807bp|location=Sequence derived from alignment at westarv0_A01:2951276..2952426- (Brassica napus Westar)|Notes=Excludes all bases but those of type(s): exon.
ATGTGTAGTTTGTCGGCGAGTCTGCTGTTACCGACAAAGCTGAAACCAGC TTATTCCGACAACCGAAGTAACAGCAACAGCTCACTCTTTCTCGCCAATA GAAGACGACCCAAGAGGAAGAACCAATCAATTGTTCCCATGGCAAGATTG TTTGGACCGGCTATTTTCGAATCATCCAAGTTGAAAGTATTGTTTTTAGG GGTTGACGAGAAGAAGCATCCATTAACGCTTCCAAGAACTTACACCCTCA CTCACAGTGACATTACTGCTAAATTAACTTTAGCTATTTCGAATTCCATT AACAATTCTCAGTTGCAAGGATGGGCAAATAGGTTATACCGAGATGAAGT GGTAGCAGAGTGGAAGAAAGTGAAAGGGAACATGTCGCTTCACGTCCACT GTCACATTAGCGGTGGCCATTTCCTTTTAGATCTATTCGCAAAGTTTAGA TATTACATCTTCTGCAAAGAACTACCAGTGGTGTTGAAGGCTTTTGTGCA TGGAGATGTGAACTTGTTGAACCACCATCCTGAGTTGCAAGAAGCTCTTG TTTATGTTTATTTCCACTCCAACGTCAATGAGTTTAACAGAGTCGAGTGT TGGGGTCCTCTTTGGGAAGCTACTTCTCCTGATGGTCACAGAACTCAAAC TCTCCCTGAGAAACAGTGCGTGGATGAATGCAGCTGTTGTTTCCCACCGG TTAGCTCGATTCCGTGGTCTCATAGTCTTAGCAACGAAGGTGTTGATAGC TACTCTGGGACTCAGGGAGAGGGAATGTCTACTCCTAGTCCAGAGAAACT CTATTGA back to topprotein sequence of BnaA01T0046800WE >BnaA01T0046800WE-P ID=BnaA01T0046800WE-P|Name=BnaA01T0046800WE|organism=Brassica napus Westar|type=polypeptide|length=269bp
MCSLSASLLLPTKLKPAYSDNRSNSNSSLFLANRRRPKRKNQSIVPMARL FGPAIFESSKLKVLFLGVDEKKHPLTLPRTYTLTHSDITAKLTLAISNSI NNSQLQGWANRLYRDEVVAEWKKVKGNMSLHVHCHISGGHFLLDLFAKFR YYIFCKELPVVLKAFVHGDVNLLNHHPELQEALVYVYFHSNVNEFNRVEC WGPLWEATSPDGHRTQTLPEKQCVDECSCCFPPVSSIPWSHSLSNEGVDS YSGTQGEGMSTPSPEKLY. back to topmRNA from alignment at westarv0_A01:2951276..2952426- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BnaA01T0046800WE ID=BnaA01T0046800WE|Name=BnaA01T0046800WE|organism=Brassica napus Westar|type=mRNA|length=1151bp|location=Sequence derived from alignment at westarv0_A01:2951276..2952426- (Brassica napus Westar) ATGTGTAGTTTGTCGGCGAGTCTGCTGTTACCGACAAAGCTGAAACCAGC
TTATTCCGACAACCGAAGTAACAGCAACAGCTCACTCTTTCTCGCCAATA
GAAGACGACCCAAGAGGAAGAACCAATCAATTGTTCCCGTAAGAGTTTTT
TTTTCATTTGGGTCTCGTCTCGTCATTTGGGTCTCGTCTTGTAATTGTTT
CGGTTTTGGATTTGGTGCAGATGGCAAGATTGTTTGGACCGGCTATTTTC
GAATCATCCAAGTTGAAAGTATTGTTTTTAGGGGTTGACGAGAAGAAGCA
TCCATTAACGCTTCCAAGAACTTACACCCTCACTCACAGTGACATTACTG
CTAAATTAACTTTAGCTATTTCGAATTCCATTAACAATTCTCAGGTAAAA
ATACATTTCTCTGCTCCTAACATTTTAATAGACATATAAAGCCTAAGTAT
GTATCTGCATCTGCTCATATGGGTAACACTGTCTTGTATCTATATATCTT
TTGGTAAAACAATCCTGAAACTACCATTGAGAGGGTTTAGTCAACGCTGA
TGTGTGGTATATGTTTTATGTAGTTGCAAGGATGGGCAAATAGGTTATAC
CGAGATGAAGTGGTAGCAGAGTGGAAGAAAGTGAAAGGGAACATGTCGCT
TCACGTCCACTGTCACATTAGCGGTGGCCATTTCCTTTTAGATCTATTCG
CAAAGTTTAGATATTACATCTTCTGCAAAGAACTACCAGTGGTAAATTTC
CAAACATCAACTCTTTACTTTATTGGTTTCATGTATACAAAAATGTTGAT
CACTATTGATAATATGTATTTTAGGTGTTGAAGGCTTTTGTGCATGGAGA
TGTGAACTTGTTGAACCACCATCCTGAGTTGCAAGAAGCTCTTGTTTATG
TTTATTTCCACTCCAACGTCAATGAGTTTAACAGAGTCGAGTGTTGGGGT
CCTCTTTGGGAAGCTACTTCTCCTGATGGTCACAGAACTCAAACTCTCCC
TGAGAAACAGTGCGTGGATGAATGCAGCTGTTGTTTCCCACCGGTTAGCT
CGATTCCGTGGTCTCATAGTCTTAGCAACGAAGGTGTTGATAGCTACTCT
GGGACTCAGGGAGAGGGAATGTCTACTCCTAGTCCAGAGAAACTCTATTG
A back to topCoding sequence (CDS) from alignment at westarv0_A01:2951276..2952426- >BnaA01T0046800WE ID=BnaA01T0046800WE|Name=BnaA01T0046800WE|organism=Brassica napus Westar|type=CDS|length=807bp|location=Sequence derived from alignment at westarv0_A01:2951276..2952426- (Brassica napus Westar) ATGTGTAGTTTGTCGGCGAGTCTGCTGTTACCGACAAAGCTGAAACCAGC TTATTCCGACAACCGAAGTAACAGCAACAGCTCACTCTTTCTCGCCAATA GAAGACGACCCAAGAGGAAGAACCAATCAATTGTTCCCATGGCAAGATTG TTTGGACCGGCTATTTTCGAATCATCCAAGTTGAAAGTATTGTTTTTAGG GGTTGACGAGAAGAAGCATCCATTAACGCTTCCAAGAACTTACACCCTCA CTCACAGTGACATTACTGCTAAATTAACTTTAGCTATTTCGAATTCCATT AACAATTCTCAGTTGCAAGGATGGGCAAATAGGTTATACCGAGATGAAGT GGTAGCAGAGTGGAAGAAAGTGAAAGGGAACATGTCGCTTCACGTCCACT GTCACATTAGCGGTGGCCATTTCCTTTTAGATCTATTCGCAAAGTTTAGA TATTACATCTTCTGCAAAGAACTACCAGTGGTGTTGAAGGCTTTTGTGCA TGGAGATGTGAACTTGTTGAACCACCATCCTGAGTTGCAAGAAGCTCTTG TTTATGTTTATTTCCACTCCAACGTCAATGAGTTTAACAGAGTCGAGTGT TGGGGTCCTCTTTGGGAAGCTACTTCTCCTGATGGTCACAGAACTCAAAC TCTCCCTGAGAAACAGTGCGTGGATGAATGCAGCTGTTGTTTCCCACCGG TTAGCTCGATTCCGTGGTCTCATAGTCTTAGCAACGAAGGTGTTGATAGC TACTCTGGGACTCAGGGAGAGGGAATGTCTACTCCTAGTCCAGAGAAACT CTATTGA back to top
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