Bnascaffold910T0000300WE-P (polypeptide) Brassica napus Westar

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Bnascaffold910T0000300WE
Unique Name	Bnascaffold910T0000300WE-P
Type	polypeptide
Organism	Brassica napus Westar (cv. Westar, rapeseed)
Sequence length	182

Homology

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BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Match: CAF2054850.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 362 bits (929), Expect = 2.110e-125
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0

Query:    1 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE 181
            MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE
Sbjct:   51 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE 231

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BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Match: CAF2054844.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 361 bits (927), Expect = 2.060e-124
Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0

Query:    1 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE 181
            MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPD+TVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE
Sbjct:   96 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDMTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE 276

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BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Match: CAF2054867.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 358 bits (920), Expect = 2.400e-123
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 0

Query:    1 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE 181
            MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEII KEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE
Sbjct:   96 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIIIKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE 276

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BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Match: KAG2250530.1 (hypothetical protein Bca52824_080666 [Brassica carinata])

HSP 1 Score: 321 bits (822), Expect = 5.970e-109
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0

Query:    1 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYC 159
            MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYC
Sbjct:   83 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYC 241

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BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Match: CAF2054853.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 322 bits (824), Expect = 8.030e-109
Identity = 162/175 (92.57%), Postives = 166/175 (94.86%), Query Frame = 0

Query:    1 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYC---RKLPKAATESFQD 172
            MERLARCVQRLWILDMSAEVLTLN VALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYC   +KLP+  +   Q+
Sbjct:   96 MERLARCVQRLWILDMSAEVLTLNMVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCESCQKLPRRVSRYHQE 270

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BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Match: KAF3521170.1 (hypothetical protein DY000_02059106 [Brassica cretica])

HSP 1 Score: 284 bits (727), Expect = 2.120e-89
Identity = 151/181 (83.43%), Postives = 152/181 (83.98%), Query Frame = 0

Query:    1 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE 181
            MERLARCVQRL                      L   Y +  EIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLE PKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE
Sbjct:  489 MERLARCVQRL----------------------LDFGYVR-REIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEDPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE 646

[Close]

BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Match: CDY37114.1 (BnaC06g03850D [Brassica napus])

HSP 1 Score: 272 bits (695), Expect = 8.830e-89
Identity = 142/177 (80.23%), Postives = 152/177 (85.88%), Query Frame = 0

Query:    2 ERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNE 178
            ERLA CVQRLWI+++SAEVLTLNTVAL  LREL I  S+ISEIKIDWKSKEKEDLLCNSSP F+HLSSI I DLEGPKELTWLLFAPNLKHL V  SG +EEIINKEKGMSISNVHPDLTVPF KLESL LRGL +LKRICS+PPALPSLK IVVE CRKLP    ESF+DT  + E
Sbjct:  124 ERLASCVQRLWIIELSAEVLTLNTVALGGLRELFIFLSEISEIKIDWKSKEKEDLLCNSSPCFKHLSSIVIIDLEGPKELTWLLFAPNLKHLEVAYSGSLEEIINKEKGMSISNVHPDLTVPFEKLESLTLRGLPKLKRICSNPPALPSLKKIVVERCRKLP---LESFRDTNSSKE 297

[Close]

BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Match: VDD60175.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 268 bits (685), Expect = 2.010e-88
Identity = 134/137 (97.81%), Postives = 134/137 (97.81%), Query Frame = 0

Query:    1 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNE 137
            MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLR   E
Sbjct:    8 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRESKE 144

[Close]

BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Match: CAF2055078.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 273 bits (698), Expect = 5.630e-86
Identity = 142/177 (80.23%), Postives = 153/177 (86.44%), Query Frame = 0

Query:    2 ERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNE 178
            ERLA CVQRLWI+++SAEVLTLNTVAL  LREL I  S+ISEIKIDWKSKEKEDLLCNSSP F+HLSSI I DLEGPKELTWLLFAPNLKHL V +SG +EEIINKEKGMSISNVHPDLTVPF KLESL LRGL +LKRICS+PPALPSLK IVVE CRKLP    ESF+DT  + E
Sbjct:  384 ERLASCVQRLWIIELSAEVLTLNTVALGGLRELFIFLSEISEIKIDWKSKEKEDLLCNSSPCFKHLSSIVIIDLEGPKELTWLLFAPNLKHLEVANSGSLEEIINKEKGMSISNVHPDLTVPFEKLESLTLRGLPKLKRICSNPPALPSLKKIVVERCRKLP---LESFRDTNSSKE 557

[Close]

BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Match: KAF3523076.1 (hypothetical protein F2Q69_00046685 [Brassica cretica])

HSP 1 Score: 260 bits (665), Expect = 6.120e-83
Identity = 137/192 (71.35%), Postives = 158/192 (82.29%), Query Frame = 0

Query:    2 ERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSS------------PPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE 181
            ERLA CVQRLWI++MSAEVLTLNTVAL  LREL+IMYS+ISEIKI+WKSKEKEDLLC+SSP F+HLS I I +L+GPKELTWLLFAPNLKH+ V  S R++EIINK+KGMSISNVHPD+TVPF KLE+L L  L++LKRICSS            PPAL SL++  VE C KLPKAAT+S +DTIKNNED E
Sbjct:  206 ERLASCVQRLWIINMSAEVLTLNTVALGGLRELYIMYSEISEIKIEWKSKEKEDLLCDSSPCFKHLSHIVIVNLQGPKELTWLLFAPNLKHISVGRSRRLKEIINKKKGMSISNVHPDMTVPFRKLETLSLWRLSKLKRICSSCCSIPENFILCPPPALQSLRHFFVEDCPKLPKAATKSIRDTIKNNEDDE 397

The following BLAST results are available for this feature:

BLAST of Bnascaffold910T0000300WE vs. GenBank_protein

BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Analysis Date: 2022-04-13 (Diamond on OGS1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
CAF2054850.1	2.110e-125	100.00	unnamed protein product [Brassica napus]	[more]
CAF2054844.1	2.060e-124	99.45	unnamed protein product [Brassica napus]	[more]
CAF2054867.1	2.400e-123	99.45	unnamed protein product [Brassica napus]	[more]
KAG2250530.1	5.970e-109	100.00	hypothetical protein Bca52824_080666 [Brassica car...	[more]
CAF2054853.1	8.030e-109	92.57	unnamed protein product [Brassica napus]	[more]
KAF3521170.1	2.120e-89	83.43	hypothetical protein DY000_02059106 [Brassica cret...	[more]
CDY37114.1	8.830e-89	80.23	BnaC06g03850D [Brassica napus]	[more]
VDD60175.1	2.010e-88	97.81	unnamed protein product [Brassica oleracea]	[more]
CAF2055078.1	5.630e-86	80.23	unnamed protein product [Brassica napus]	[more]
KAF3523076.1	6.120e-83	71.35	hypothetical protein F2Q69_00046685 [Brassica cret...	[more]

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GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0005524	ATP binding

InterPro

Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-04-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 5..179 e-value: 1.8E-10 score: 41.9
None	No IPR available	PANTHER	PTHR33463:SF85	RESISTANCE PROTEIN FAMILY, PUTATIVE-RELATED	coord: 36..169
None	No IPR available	PANTHER	PTHR33463	FAMILY NOT NAMED	coord: 36..169
None	No IPR available	SUPERFAMILY	52047	RNI-like	coord: 11..165

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold910	contig	scaffold910:11174..11719 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Interproscan on OGS1.0	2022-04-13 .72417
Blast2go on OGS1.0	2022-04-13 .735315
Diamond on OGS1.0 vs NR	2022-04-13 .782894
Brassica napus Westar OGS1.0	2022-04-13 .642364

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Bnascaffold910T0000300WE	Bnascaffold910T0000300WE	Brassica napus Westar	mRNA	scaffold910 11174..11719 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Bnascaffold910T0000300WE-P ID=Bnascaffold910T0000300WE-P|Name=Bnascaffold910T0000300WE|organism=Brassica napus Westar|type=polypeptide|length=182bp
MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKS
KEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGR
IEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPS
LKNIVVEYCRKLPKAATESFQDTIKNNEDAE.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032675	LRR_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0043531	ADP binding
GO:0005524	ATP binding

Orthology

View orthology data for Bnascaffold910T0000300WE-P