Bnascaffold910T0000300WE-P (polypeptide) Brassica napus Westar

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameBnascaffold910T0000300WE
Unique NameBnascaffold910T0000300WE-P
Typepolypeptide
OrganismBrassica napus Westar (cv. Westar, rapeseed)
Sequence length182
Homology
BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Match: CAF2054850.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 362 bits (929), Expect = 2.110e-125
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
Query:    1 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE 181
            MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE
Sbjct:   51 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE 231          
BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Match: CAF2054844.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 361 bits (927), Expect = 2.060e-124
Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0
Query:    1 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE 181
            MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPD+TVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE
Sbjct:   96 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDMTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE 276          
BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Match: CAF2054867.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 358 bits (920), Expect = 2.400e-123
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 0
Query:    1 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE 181
            MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEII KEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE
Sbjct:   96 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIIIKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE 276          
BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Match: KAG2250530.1 (hypothetical protein Bca52824_080666 [Brassica carinata])

HSP 1 Score: 321 bits (822), Expect = 5.970e-109
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
Query:    1 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYC 159
            MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYC
Sbjct:   83 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYC 241          
BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Match: CAF2054853.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 322 bits (824), Expect = 8.030e-109
Identity = 162/175 (92.57%), Postives = 166/175 (94.86%), Query Frame = 0
Query:    1 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYC---RKLPKAATESFQD 172
            MERLARCVQRLWILDMSAEVLTLN VALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYC   +KLP+  +   Q+
Sbjct:   96 MERLARCVQRLWILDMSAEVLTLNMVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCESCQKLPRRVSRYHQE 270          
BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Match: KAF3521170.1 (hypothetical protein DY000_02059106 [Brassica cretica])

HSP 1 Score: 284 bits (727), Expect = 2.120e-89
Identity = 151/181 (83.43%), Postives = 152/181 (83.98%), Query Frame = 0
Query:    1 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE 181
            MERLARCVQRL                      L   Y +  EIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLE PKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE
Sbjct:  489 MERLARCVQRL----------------------LDFGYVR-REIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEDPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE 646          
BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Match: CDY37114.1 (BnaC06g03850D [Brassica napus])

HSP 1 Score: 272 bits (695), Expect = 8.830e-89
Identity = 142/177 (80.23%), Postives = 152/177 (85.88%), Query Frame = 0
Query:    2 ERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNE 178
            ERLA CVQRLWI+++SAEVLTLNTVAL  LREL I  S+ISEIKIDWKSKEKEDLLCNSSP F+HLSSI I DLEGPKELTWLLFAPNLKHL V  SG +EEIINKEKGMSISNVHPDLTVPF KLESL LRGL +LKRICS+PPALPSLK IVVE CRKLP    ESF+DT  + E
Sbjct:  124 ERLASCVQRLWIIELSAEVLTLNTVALGGLRELFIFLSEISEIKIDWKSKEKEDLLCNSSPCFKHLSSIVIIDLEGPKELTWLLFAPNLKHLEVAYSGSLEEIINKEKGMSISNVHPDLTVPFEKLESLTLRGLPKLKRICSNPPALPSLKKIVVERCRKLP---LESFRDTNSSKE 297          
BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Match: VDD60175.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 268 bits (685), Expect = 2.010e-88
Identity = 134/137 (97.81%), Postives = 134/137 (97.81%), Query Frame = 0
Query:    1 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNE 137
            MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLR   E
Sbjct:    8 MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRESKE 144          
BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Match: CAF2055078.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 273 bits (698), Expect = 5.630e-86
Identity = 142/177 (80.23%), Postives = 153/177 (86.44%), Query Frame = 0
Query:    2 ERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPSLKNIVVEYCRKLPKAATESFQDTIKNNE 178
            ERLA CVQRLWI+++SAEVLTLNTVAL  LREL I  S+ISEIKIDWKSKEKEDLLCNSSP F+HLSSI I DLEGPKELTWLLFAPNLKHL V +SG +EEIINKEKGMSISNVHPDLTVPF KLESL LRGL +LKRICS+PPALPSLK IVVE CRKLP    ESF+DT  + E
Sbjct:  384 ERLASCVQRLWIIELSAEVLTLNTVALGGLRELFIFLSEISEIKIDWKSKEKEDLLCNSSPCFKHLSSIVIIDLEGPKELTWLLFAPNLKHLEVANSGSLEEIINKEKGMSISNVHPDLTVPFEKLESLTLRGLPKLKRICSNPPALPSLKKIVVERCRKLP---LESFRDTNSSKE 557          
BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Match: KAF3523076.1 (hypothetical protein F2Q69_00046685 [Brassica cretica])

HSP 1 Score: 260 bits (665), Expect = 6.120e-83
Identity = 137/192 (71.35%), Postives = 158/192 (82.29%), Query Frame = 0
Query:    2 ERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKSKEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGRIEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSS------------PPALPSLKNIVVEYCRKLPKAATESFQDTIKNNEDAE 181
            ERLA CVQRLWI++MSAEVLTLNTVAL  LREL+IMYS+ISEIKI+WKSKEKEDLLC+SSP F+HLS I I +L+GPKELTWLLFAPNLKH+ V  S R++EIINK+KGMSISNVHPD+TVPF KLE+L L  L++LKRICSS            PPAL SL++  VE C KLPKAAT+S +DTIKNNED E
Sbjct:  206 ERLASCVQRLWIINMSAEVLTLNTVALGGLRELYIMYSEISEIKIEWKSKEKEDLLCDSSPCFKHLSHIVIVNLQGPKELTWLLFAPNLKHISVGRSRRLKEIINKKKGMSISNVHPDMTVPFRKLETLSLWRLSKLKRICSSCCSIPENFILCPPPALQSLRHFFVEDCPKLPKAATKSIRDTIKNNEDDE 397          
The following BLAST results are available for this feature:
BLAST of Bnascaffold910T0000300WE vs. GenBank_protein
Analysis Date: 2022-04-13 (Diamond on OGS1.0 vs NR)
Total hits: 20
Match NameE-valueIdentityDescription
CAF2054850.12.110e-125100.00unnamed protein product [Brassica napus][more]
CAF2054844.12.060e-12499.45unnamed protein product [Brassica napus][more]
CAF2054867.12.400e-12399.45unnamed protein product [Brassica napus][more]
KAG2250530.15.970e-109100.00hypothetical protein Bca52824_080666 [Brassica car... [more]
CAF2054853.18.030e-10992.57unnamed protein product [Brassica napus][more]
KAF3521170.12.120e-8983.43hypothetical protein DY000_02059106 [Brassica cret... [more]
CDY37114.18.830e-8980.23BnaC06g03850D [Brassica napus][more]
VDD60175.12.010e-8897.81unnamed protein product [Brassica oleracea][more]
CAF2055078.15.630e-8680.23unnamed protein product [Brassica napus][more]
KAF3523076.16.120e-8371.35hypothetical protein F2Q69_00046685 [Brassica cret... [more]

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GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0043531 ADP binding
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-04-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 5..179
e-value: 1.8E-10
score: 41.9
NoneNo IPR availablePANTHERPTHR33463:SF85RESISTANCE PROTEIN FAMILY, PUTATIVE-RELATEDcoord: 36..169
NoneNo IPR availablePANTHERPTHR33463FAMILY NOT NAMEDcoord: 36..169
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 11..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold910contigscaffold910:11174..11719 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Interproscan on OGS1.02022-04-13 .72417
Blast2go on OGS1.02022-04-13 .735315
Diamond on OGS1.0 vs NR2022-04-13 .782894
Brassica napus Westar OGS1.02022-04-13 .642364
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Bnascaffold910T0000300WEBnascaffold910T0000300WEBrassica napus WestarmRNAscaffold910 11174..11719 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Bnascaffold910T0000300WE-P ID=Bnascaffold910T0000300WE-P|Name=Bnascaffold910T0000300WE|organism=Brassica napus Westar|type=polypeptide|length=182bp
MERLARCVQRLWILDMSAEVLTLNTVALCCLRELHIMYSKISEIKIDWKS
KEKEDLLCNSSPYFRHLSSIAIYDLEGPKELTWLLFAPNLKHLHVTSSGR
IEEIINKEKGMSISNVHPDLTVPFAKLESLRLRGLNELKRICSSPPALPS
LKNIVVEYCRKLPKAATESFQDTIKNNEDAE.
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0043531ADP binding
GO:0005524ATP binding