Bnascaffold799T0000100WE-P (polypeptide) Brassica napus Westar

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameBnascaffold799T0000100WE
Unique NameBnascaffold799T0000100WE-P
Typepolypeptide
OrganismBrassica napus Westar (cv. Westar, rapeseed)
Sequence length215
Homology
BLAST of Bnascaffold799T0000100WE vs. GenBank_protein
Match: KAF3554185.1 (hypothetical protein F2Q69_00016741 [Brassica cretica])

HSP 1 Score: 351 bits (901), Expect = 1.860e-115
Identity = 203/226 (89.82%), Postives = 205/226 (90.71%), Query Frame = 0
Query:    1 MPVHLLVQQPGREHLPFLQLNPRRGHSTWFTKSKNGISRSINQMMYSMLRFGYPKWSVIPSDERELTTGQIQ------------DPVIRGVVDLVEAEIVSQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSXXXXXXXXXXXXXXELASQKKFNTEIMQKLDRLMSSSSS 214
            MPVHLLVQQPGREH+P LQ NPRRGH TWFTKSKNGISRSINQMMYSMLRFGYPKWSVIP DEREL   Q              DPVI+GVVDLVEAEIVSQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSXXXXXXXXXXXXXXELASQKKFNTEIMQKLDRLMSSSSS
Sbjct:  372 MPVHLLVQQPGREHIPVLQPNPRRGHITWFTKSKNGISRSINQMMYSMLRFGYPKWSVIPYDERELWFRQFAQEFNWHSDLTETDPVIKGVVDLVEAEIVSQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSXXXXXXXXXXXXXXELASQKKFNTEIMQKLDRLMSSSSS 597          
BLAST of Bnascaffold799T0000100WE vs. GenBank_protein
Match: KAG5376440.1 (hypothetical protein IGI04_041036 [Brassica rapa subsp. trilocularis] >KAG5387155.1 hypothetical protein IGI04_038625 [Brassica rapa subsp. trilocularis])

HSP 1 Score: 338 bits (868), Expect = 9.500e-115
Identity = 196/225 (87.11%), Postives = 199/225 (88.44%), Query Frame = 0
Query:    1 MPVHLLVQQPGREHLPFLQLNPRRGHSTWFTKSKNGISRSINQMMYSMLRFGYPKWSVIPSDERELTTGQIQ------------DPVIRGVVDLVEAEIVSQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSXXXXXXXXXXXXXXELASQKKFNTEIMQKLDRLMSSSS 213
            MPV LLVQQPGREHLP L  NPRRGHSTWFTKSKNGISRSINQMMYSMLRFGY KWSVIP +EREL   Q              DPVI+GVVDLVEAEI +QSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILS XXXXXXXXXXXXXELASQKKFN EIMQKLDRLMSSSS
Sbjct:   59 MPVDLLVQQPGREHLPVLHPNPRRGHSTWFTKSKNGISRSINQMMYSMLRFGYSKWSVIPFEERELWFRQFAQEFNWHSDLTETDPVIKGVVDLVEAEIATQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSEXXXXXXXXXXXXXELASQKKFNAEIMQKLDRLMSSSS 283          
BLAST of Bnascaffold799T0000100WE vs. GenBank_protein
Match: KAG5380504.1 (hypothetical protein IGI04_028346, partial [Brassica rapa subsp. trilocularis])

HSP 1 Score: 338 bits (868), Expect = 1.130e-114
Identity = 196/225 (87.11%), Postives = 199/225 (88.44%), Query Frame = 0
Query:    1 MPVHLLVQQPGREHLPFLQLNPRRGHSTWFTKSKNGISRSINQMMYSMLRFGYPKWSVIPSDERELTTGQIQ------------DPVIRGVVDLVEAEIVSQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSXXXXXXXXXXXXXXELASQKKFNTEIMQKLDRLMSSSS 213
            MPV LLVQQPGREHLP L  NPRRGHSTWFTKSKNGISRSINQMMYSMLRFGY KWSVIP +EREL   Q              DPVI+GVVDLVEAEI +QSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILS XXXXXXXXXXXXXELASQKKFN EIMQKLDRLMSSSS
Sbjct:   64 MPVDLLVQQPGREHLPVLHPNPRRGHSTWFTKSKNGISRSINQMMYSMLRFGYSKWSVIPFEERELWFRQFAQEFNWHSDLTETDPVIKGVVDLVEAEIATQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSEXXXXXXXXXXXXXELASQKKFNAEIMQKLDRLMSSSS 288          
BLAST of Bnascaffold799T0000100WE vs. GenBank_protein
Match: KAG5415700.1 (hypothetical protein IGI04_003267 [Brassica rapa subsp. trilocularis])

HSP 1 Score: 347 bits (891), Expect = 2.470e-114
Identity = 196/213 (92.02%), Postives = 199/213 (93.43%), Query Frame = 0
Query:    1 MPVHLLVQQPGREHLPFLQLNPRRGHSTWFTKSKNGISRSINQMMYSMLRFGYPKWSVIPSDERELTTGQIQDPVIRGVVDLVEAEIVSQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSXXXXXXXXXXXXXXELASQKKFNTEIMQKLDRLMSSSS 213
            MPV LLVQQPGREHLP L  NPRRGHSTWFTKSKNGISRSINQMMYSMLRFGY KWSVIP +EREL   Q  DPVI+GVVDLVEAEI +QSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILS XXXXXXXXXXXXXELASQKKFN EIMQKLDRLMSSSS
Sbjct:  354 MPVDLLVQQPGREHLPVLHPNPRRGHSTWFTKSKNGISRSINQMMYSMLRFGYSKWSVIPFEERELWFRQFADPVIKGVVDLVEAEIATQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSEXXXXXXXXXXXXXELASQKKFNAEIMQKLDRLMSSSS 566          
BLAST of Bnascaffold799T0000100WE vs. GenBank_protein
Match: KAG5378256.1 (hypothetical protein IGI04_026098 [Brassica rapa subsp. trilocularis])

HSP 1 Score: 338 bits (868), Expect = 3.240e-114
Identity = 196/225 (87.11%), Postives = 199/225 (88.44%), Query Frame = 0
Query:    1 MPVHLLVQQPGREHLPFLQLNPRRGHSTWFTKSKNGISRSINQMMYSMLRFGYPKWSVIPSDERELTTGQIQ------------DPVIRGVVDLVEAEIVSQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSXXXXXXXXXXXXXXELASQKKFNTEIMQKLDRLMSSSS 213
            MPV LLVQQPGREHLP L  NPRRGHSTWFTKSKNGISRSINQMMYSMLRFGY KWSVIP +EREL   Q              DPVI+GVVDLVEAEI +QSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILS XXXXXXXXXXXXXELASQKKFN EIMQKLDRLMSSSS
Sbjct:   95 MPVDLLVQQPGREHLPVLHPNPRRGHSTWFTKSKNGISRSINQMMYSMLRFGYSKWSVIPFEERELWFRQFAQEFNWHSDLTETDPVIKGVVDLVEAEIATQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSEXXXXXXXXXXXXXELASQKKFNAEIMQKLDRLMSSSS 319          
BLAST of Bnascaffold799T0000100WE vs. GenBank_protein
Match: KAG5394265.1 (hypothetical protein IGI04_024228 [Brassica rapa subsp. trilocularis])

HSP 1 Score: 338 bits (868), Expect = 4.690e-114
Identity = 196/225 (87.11%), Postives = 199/225 (88.44%), Query Frame = 0
Query:    1 MPVHLLVQQPGREHLPFLQLNPRRGHSTWFTKSKNGISRSINQMMYSMLRFGYPKWSVIPSDERELTTGQIQ------------DPVIRGVVDLVEAEIVSQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSXXXXXXXXXXXXXXELASQKKFNTEIMQKLDRLMSSSS 213
            MPV LLVQQPGREHLP L  NPRRGHSTWFTKSKNGISRSINQMMYSMLRFGY KWSVIP +EREL   Q              DPVI+GVVDLVEAEI +QSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILS XXXXXXXXXXXXXELASQKKFN EIMQKLDRLMSSSS
Sbjct:  106 MPVDLLVQQPGREHLPVLHPNPRRGHSTWFTKSKNGISRSINQMMYSMLRFGYSKWSVIPFEERELWFRQFAQEFNWHSDLTETDPVIKGVVDLVEAEIATQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSEXXXXXXXXXXXXXELASQKKFNAEIMQKLDRLMSSSS 330          
BLAST of Bnascaffold799T0000100WE vs. GenBank_protein
Match: KAG5393078.1 (hypothetical protein IGI04_023041 [Brassica rapa subsp. trilocularis])

HSP 1 Score: 337 bits (863), Expect = 6.280e-114
Identity = 195/225 (86.67%), Postives = 198/225 (88.00%), Query Frame = 0
Query:    1 MPVHLLVQQPGREHLPFLQLNPRRGHSTWFTKSKNGISRSINQMMYSMLRFGYPKWSVIPSDERELTTGQIQ------------DPVIRGVVDLVEAEIVSQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSXXXXXXXXXXXXXXELASQKKFNTEIMQKLDRLMSSSS 213
            MPV LLVQQPGREHLP L  NPRRGHSTWFTKSKNGISRSINQMMYSMLRFGY KWSVIP +EREL   Q              DPVI+GVVDLVEAEI +QSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLA RASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILS XXXXXXXXXXXXXELASQKKFN EIMQKLDRLMSSSS
Sbjct:   63 MPVDLLVQQPGREHLPVLHPNPRRGHSTWFTKSKNGISRSINQMMYSMLRFGYSKWSVIPFEERELWFRQFAQEFNWHSDLTETDPVIKGVVDLVEAEIATQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLAHRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSEXXXXXXXXXXXXXELASQKKFNAEIMQKLDRLMSSSS 287          
BLAST of Bnascaffold799T0000100WE vs. GenBank_protein
Match: KAG5397287.1 (hypothetical protein IGI04_019101, partial [Brassica rapa subsp. trilocularis])

HSP 1 Score: 338 bits (868), Expect = 6.550e-114
Identity = 196/225 (87.11%), Postives = 199/225 (88.44%), Query Frame = 0
Query:    1 MPVHLLVQQPGREHLPFLQLNPRRGHSTWFTKSKNGISRSINQMMYSMLRFGYPKWSVIPSDERELTTGQIQ------------DPVIRGVVDLVEAEIVSQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSXXXXXXXXXXXXXXELASQKKFNTEIMQKLDRLMSSSS 213
            MPV LLVQQPGREHLP L  NPRRGHSTWFTKSKNGISRSINQMMYSMLRFGY KWSVIP +EREL   Q              DPVI+GVVDLVEAEI +QSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILS XXXXXXXXXXXXXELASQKKFN EIMQKLDRLMSSSS
Sbjct:  116 MPVDLLVQQPGREHLPVLHPNPRRGHSTWFTKSKNGISRSINQMMYSMLRFGYSKWSVIPFEERELWFRQFAQEFNWHSDLTETDPVIKGVVDLVEAEIATQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSEXXXXXXXXXXXXXELASQKKFNAEIMQKLDRLMSSSS 340          
BLAST of Bnascaffold799T0000100WE vs. GenBank_protein
Match: KAG5390546.1 (hypothetical protein IGI04_032087, partial [Brassica rapa subsp. trilocularis])

HSP 1 Score: 338 bits (868), Expect = 6.770e-114
Identity = 196/225 (87.11%), Postives = 199/225 (88.44%), Query Frame = 0
Query:    1 MPVHLLVQQPGREHLPFLQLNPRRGHSTWFTKSKNGISRSINQMMYSMLRFGYPKWSVIPSDERELTTGQIQ------------DPVIRGVVDLVEAEIVSQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSXXXXXXXXXXXXXXELASQKKFNTEIMQKLDRLMSSSS 213
            MPV LLVQQPGREHLP L  NPRRGHSTWFTKSKNGISRSINQMMYSMLRFGY KWSVIP +EREL   Q              DPVI+GVVDLVEAEI +QSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILS XXXXXXXXXXXXXELASQKKFN EIMQKLDRLMSSSS
Sbjct:  117 MPVDLLVQQPGREHLPVLHPNPRRGHSTWFTKSKNGISRSINQMMYSMLRFGYSKWSVIPFEERELWFRQFAQEFNWHSDLTETDPVIKGVVDLVEAEIATQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSEXXXXXXXXXXXXXELASQKKFNAEIMQKLDRLMSSSS 341          
BLAST of Bnascaffold799T0000100WE vs. GenBank_protein
Match: KAG5415185.1 (hypothetical protein IGI04_002752 [Brassica rapa subsp. trilocularis])

HSP 1 Score: 337 bits (863), Expect = 3.080e-113
Identity = 195/225 (86.67%), Postives = 198/225 (88.00%), Query Frame = 0
Query:    1 MPVHLLVQQPGREHLPFLQLNPRRGHSTWFTKSKNGISRSINQMMYSMLRFGYPKWSVIPSDERELTTGQIQ------------DPVIRGVVDLVEAEIVSQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSXXXXXXXXXXXXXXELASQKKFNTEIMQKLDRLMSSSS 213
            MPV LLVQQPGREHLP L  NPRRGHSTWFTKSKNGISRSINQMMYSMLRFGY KWSVIP +EREL   Q              DPVI+GVVDLVEAEI +QSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLA RASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILS XXXXXXXXXXXXXELASQKKFN EIMQKLDRLMSSSS
Sbjct:  110 MPVDLLVQQPGREHLPVLHPNPRRGHSTWFTKSKNGISRSINQMMYSMLRFGYSKWSVIPFEERELWFRQFAQEFNWHSDLTETDPVIKGVVDLVEAEIATQSQPLSDDGDSTGASTNLSLLQINEMVEKAVPKRKGGRLVGLAHRASSYPASSSQAPYADPMILEELHDKDERIGALEEQNTTILSEXXXXXXXXXXXXXELASQKKFNAEIMQKLDRLMSSSS 334          
The following BLAST results are available for this feature:
BLAST of Bnascaffold799T0000100WE vs. GenBank_protein
Analysis Date: 2022-04-13 (Diamond on OGS1.0 vs NR)
Total hits: 20
Match NameE-valueIdentityDescription
KAF3554185.11.860e-11589.82hypothetical protein F2Q69_00016741 [Brassica cret... [more]
KAG5376440.19.500e-11587.11hypothetical protein IGI04_041036 [Brassica rapa s... [more]
KAG5380504.11.130e-11487.11hypothetical protein IGI04_028346, partial [Brassi... [more]
KAG5415700.12.470e-11492.02hypothetical protein IGI04_003267 [Brassica rapa s... [more]
KAG5378256.13.240e-11487.11hypothetical protein IGI04_026098 [Brassica rapa s... [more]
KAG5394265.14.690e-11487.11hypothetical protein IGI04_024228 [Brassica rapa s... [more]
KAG5393078.16.280e-11486.67hypothetical protein IGI04_023041 [Brassica rapa s... [more]
KAG5397287.16.550e-11487.11hypothetical protein IGI04_019101, partial [Brassi... [more]
KAG5390546.16.770e-11487.11hypothetical protein IGI04_032087, partial [Brassi... [more]
KAG5415185.13.080e-11386.67hypothetical protein IGI04_002752 [Brassica rapa s... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold799contigscaffold799:16184..17521 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Interproscan on OGS1.02022-04-13 .72417
Diamond on OGS1.0 vs NR2022-04-13 .782894
Brassica napus Westar OGS1.02022-04-13 .642364
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Bnascaffold799T0000100WEBnascaffold799T0000100WEBrassica napus WestarmRNAscaffold799 16184..17521 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Bnascaffold799T0000100WE-P ID=Bnascaffold799T0000100WE-P|Name=Bnascaffold799T0000100WE|organism=Brassica napus Westar|type=polypeptide|length=215bp
MPVHLLVQQPGREHLPFLQLNPRRGHSTWFTKSKNGISRSINQMMYSMLR
FGYPKWSVIPSDERELTTGQIQDPVIRGVVDLVEAEIVSQSQPLSDDGDS
TGASTNLSLLQINEMVEKAVPKRKGGRLVGLARRASSYPASSSQAPYADP
MILEELHDKDERIGALEEQNTTILSENATIRSENATILAELASQKKFNTE
IMQKLDRLMSSSSS.
back to top