Bnascaffold772T0000400WE-P (polypeptide) Brassica napus Westar

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Bnascaffold772T0000400WE
Unique Name	Bnascaffold772T0000400WE-P
Type	polypeptide
Organism	Brassica napus Westar (cv. Westar, rapeseed)
Sequence length	685

Homology

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BLAST of Bnascaffold772T0000400WE vs. GenBank_protein
Match: XP_013697667.1 (putative pentatricopeptide repeat-containing protein At3g08820 [Brassica napus] >CAF1935884.1 unnamed protein product [Brassica napus])

HSP 1 Score: 1357 bits (3512), Expect = 0.000e+0
Identity = 674/685 (98.39%), Postives = 678/685 (98.98%), Query Frame = 0

Query:    1 MSIATVSSPSKLHQIKTLISVASTVNHLKQIHASLIHHDHHHDTYLVNLLLKRTLFFRENHYSFLLFSHTQFPNIFLYNTLINGFVNNNLFRETLDLFLSVREH-GLSLYGFTFPFVLKACIRSQNLNLGIELHPLVVKCGFNRDAGAMTSLLSLYSGSGRVGDARKVFDEMPERTIVSWTAFFSGCIASGKHGDAIGLFKKMVESGVRPDSYSVVRVLSACVQVGDLDSAEWIANLVEEIEMQKNSYVNTTLVNLYAKRGKMEKARSVFDSMGEKDAVTWSTMIQGYASNSLPKEGVELFHQMLREDLKPDQYSIVGFLSSCASLGALDLGEWGSGLIDRDEFLTNLVMGNALIDMFAKCGDMTRGFQVFKDMKEKDRVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQLSEAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHEAMKLISKITRREIVVRDNNRFHCFTNGTCSCNDYW 684
            MSIA VSSPSKLHQIKTLISVASTVNHLKQIHASLIHHDHHHDTYLVNLLLKRTLFFRENHYS LLFSHTQFPNIFLYNTLING VNN+LFRETLDLFLSVR+H GLSLYGFTFPFVLKACIRSQNL LGIELHPLVVKCGFNRDAGAMTSLLSLYSGSGRV DARKVFDEMPERTIVSWTAFFSGCI+SGKHGDAIGLFKKMVESGVRPDSYSVVRVLSACVQVGDLDSAEWIANLVEEIEMQKNSYVNTTLVNLY KRGKMEKARSVFDSMGEKDAVTWSTMIQGYASNSLPKEGVELFHQMLREDLKPDQYSIVGFLSSCASLGALDLGEWGSGLIDRDEFLTNLVMGNALIDM+AKCGDMTRGFQVFKDMKEKDRVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQLSEAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHEAMKLISKITRREIVVRDNNRFHCFTNGTCSCNDYW
Sbjct:    1 MSIAAVSSPSKLHQIKTLISVASTVNHLKQIHASLIHHDHHHDTYLVNLLLKRTLFFRENHYSSLLFSHTQFPNIFLYNTLINGLVNNSLFRETLDLFLSVRKHHGLSLYGFTFPFVLKACIRSQNLTLGIELHPLVVKCGFNRDAGAMTSLLSLYSGSGRVDDARKVFDEMPERTIVSWTAFFSGCISSGKHGDAIGLFKKMVESGVRPDSYSVVRVLSACVQVGDLDSAEWIANLVEEIEMQKNSYVNTTLVNLYTKRGKMEKARSVFDSMGEKDAVTWSTMIQGYASNSLPKEGVELFHQMLREDLKPDQYSIVGFLSSCASLGALDLGEWGSGLIDRDEFLTNLVMGNALIDMYAKCGDMTRGFQVFKDMKEKDRVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQLSEAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHEAMKLISKITRREIVVRDNNRFHCFTNGTCSCNDYW 685

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BLAST of Bnascaffold772T0000400WE vs. GenBank_protein
Match: XP_013587304.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At3g08820 [Brassica oleracea var. oleracea])

HSP 1 Score: 1350 bits (3495), Expect = 0.000e+0
Identity = 669/684 (97.81%), Postives = 673/684 (98.39%), Query Frame = 0

Query:    1 MSIATVSSPSKLHQIKTLISVASTVNHLKQIHASLIHHDHHHDTYLVNLLLKRTLFFRENHYSFLLFSHTQFPNIFLYNTLINGFVNNNLFRETLDLFLSVREHGLSLYGFTFPFVLKACIRSQNLNLGIELHPLVVKCGFNRDAGAMTSLLSLYSGSGRVGDARKVFDEMPERTIVSWTAFFSGCIASGKHGDAIGLFKKMVESGVRPDSYSVVRVLSACVQVGDLDSAEWIANLVEEIEMQKNSYVNTTLVNLYAKRGKMEKARSVFDSMGEKDAVTWSTMIQGYASNSLPKEGVELFHQMLREDLKPDQYSIVGFLSSCASLGALDLGEWGSGLIDRDEFLTNLVMGNALIDMFAKCGDMTRGFQVFKDMKEKDRVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQLSEAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHEAMKLISKITRREIVVRDNNRFHCFTNGTCSCNDYW 684
            MSIATVSSPSKLHQIKTLISVASTVNHLKQIHASLIHHDHHHDTYLVNLLLKRTLFFRENHYSFLLFSHTQFPNIFLYNTLINGFVN+NLFRETLDLFLSVREHGLSLYGFTFPFVLKACIRSQNLNLGIELHPLVVKCGFNRD GAMTSLLSLYSG GRV DARK+FDEMPERTIVSWTAF SGCIASGKHGDAIGLF KMVESGVRPDSYSVVRVLSACVQVGDLDSAEWIANLVEEIEM KNSYV  TLVNLYAK GKMEKARSVFDSM EKD VTWSTMIQGYASNSLPKEGVELFHQMLREDLKPDQYSIVGFLSSCASLGALDLGEWGSGLIDRDEFLTNLVMGNALIDM+AKCGDMTRGFQVFK+MKEKDRVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQLSEAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHEAMKLISKITRREIVVRDNNRFHCFTNGTCSCNDYW
Sbjct:    1 MSIATVSSPSKLHQIKTLISVASTVNHLKQIHASLIHHDHHHDTYLVNLLLKRTLFFRENHYSFLLFSHTQFPNIFLYNTLINGFVNDNLFRETLDLFLSVREHGLSLYGFTFPFVLKACIRSQNLNLGIELHPLVVKCGFNRDVGAMTSLLSLYSGFGRVDDARKLFDEMPERTIVSWTAFVSGCIASGKHGDAIGLFNKMVESGVRPDSYSVVRVLSACVQVGDLDSAEWIANLVEEIEMHKNSYVYATLVNLYAKGGKMEKARSVFDSMAEKDIVTWSTMIQGYASNSLPKEGVELFHQMLREDLKPDQYSIVGFLSSCASLGALDLGEWGSGLIDRDEFLTNLVMGNALIDMYAKCGDMTRGFQVFKEMKEKDRVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQLSEAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHEAMKLISKITRREIVVRDNNRFHCFTNGTCSCNDYW 684

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BLAST of Bnascaffold772T0000400WE vs. GenBank_protein
Match: VDD47009.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 1350 bits (3495), Expect = 0.000e+0
Identity = 669/685 (97.66%), Postives = 677/685 (98.83%), Query Frame = 0

Query:    1 MSIATVSSPSKLHQIKTLISVASTVNHLKQIHASLIHHDHHHDTYLVNLLLKRTLFFRENHYSFLLFSHTQFPNIFLYNTLINGFVNNNLFRETLDLFLSVREH-GLSLYGFTFPFVLKACIRSQNLNLGIELHPLVVKCGFNRDAGAMTSLLSLYSGSGRVGDARKVFDEMPERTIVSWTAFFSGCIASGKHGDAIGLFKKMVESGVRPDSYSVVRVLSACVQVGDLDSAEWIANLVEEIEMQKNSYVNTTLVNLYAKRGKMEKARSVFDSMGEKDAVTWSTMIQGYASNSLPKEGVELFHQMLREDLKPDQYSIVGFLSSCASLGALDLGEWGSGLIDRDEFLTNLVMGNALIDMFAKCGDMTRGFQVFKDMKEKDRVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQLSEAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHEAMKLISKITRREIVVRDNNRFHCFTNGTCSCNDYW 684
            MSIA VSSPSKLHQIKTLISVASTVNHLKQIHASLIHHDHHHDTYLVNLLLKRTLFFRENHYSFLLFSHTQFPNIFLYNTLINGFVNNNLFRETLDLFLSVR+H GLSLYGFTFPFVLKACIRSQNL LGIELHPLVVKCGFNRD GA TSLLSLYSGSGRV DARK+FDEMPERTIVSWTAF SGCIASGKH +AIGLFKKMVESGVRPDSYSVVRVLSACVQVGDLDSAEWIANLVEEIEMQKNSYVNTTLVN+YAKRGKMEKARSVFDSMGEKDAV+WSTMIQGYASNSLPKEGVELFHQMLREDLKPDQYSIVGFLSSCASLGALDLG+WGSGLIDRDEFLTNLVMGNALIDM+AKCGDMTRGFQVFKDMKEKDRVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQLSEAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHEAMKLISKITRREIVVRDNNRFHCFTNG+CSCNDYW
Sbjct:    1 MSIAAVSSPSKLHQIKTLISVASTVNHLKQIHASLIHHDHHHDTYLVNLLLKRTLFFRENHYSFLLFSHTQFPNIFLYNTLINGFVNNNLFRETLDLFLSVRKHHGLSLYGFTFPFVLKACIRSQNLTLGIELHPLVVKCGFNRDVGAKTSLLSLYSGSGRVDDARKLFDEMPERTIVSWTAFISGCIASGKHSEAIGLFKKMVESGVRPDSYSVVRVLSACVQVGDLDSAEWIANLVEEIEMQKNSYVNTTLVNVYAKRGKMEKARSVFDSMGEKDAVSWSTMIQGYASNSLPKEGVELFHQMLREDLKPDQYSIVGFLSSCASLGALDLGQWGSGLIDRDEFLTNLVMGNALIDMYAKCGDMTRGFQVFKDMKEKDRVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQLSEAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHEAMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685

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BLAST of Bnascaffold772T0000400WE vs. GenBank_protein
Match: XP_009146978.1 (putative pentatricopeptide repeat-containing protein At3g08820 [Brassica rapa] >XP_013750460.1 putative pentatricopeptide repeat-containing protein At3g08820 [Brassica napus] >RID64179.1 hypothetical protein BRARA_E03135 [Brassica rapa] >CAF2102581.1 unnamed protein product [Brassica napus] >CDY36010.1 BnaA05g29400D [Brassica napus] >VDC73195.1 unnamed protein product [Brassica rapa])

HSP 1 Score: 1349 bits (3491), Expect = 0.000e+0
Identity = 666/684 (97.37%), Postives = 674/684 (98.54%), Query Frame = 0

Query:    1 MSIATVSSPSKLHQIKTLISVASTVNHLKQIHASLIHHDHHHDTYLVNLLLKRTLFFRENHYSFLLFSHTQFPNIFLYNTLINGFVNNNLFRETLDLFLSVREHGLSLYGFTFPFVLKACIRSQNLNLGIELHPLVVKCGFNRDAGAMTSLLSLYSGSGRVGDARKVFDEMPERTIVSWTAFFSGCIASGKHGDAIGLFKKMVESGVRPDSYSVVRVLSACVQVGDLDSAEWIANLVEEIEMQKNSYVNTTLVNLYAKRGKMEKARSVFDSMGEKDAVTWSTMIQGYASNSLPKEGVELFHQMLREDLKPDQYSIVGFLSSCASLGALDLGEWGSGLIDRDEFLTNLVMGNALIDMFAKCGDMTRGFQVFKDMKEKDRVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQLSEAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHEAMKLISKITRREIVVRDNNRFHCFTNGTCSCNDYW 684
            MSIATVSSPSKLHQIKTLISVAS+VNHLKQIHASLIHHDHHHDTYLVNLLLKRTLFFRENHYS LLFSHTQFPNIFLYNTLINGFVNNNLFRETLDLFLSVR+HGLSLYGFTFPFVLKACIRSQNL LGIELHPLVVKCGFN DAGAMTSLLSLYSGSGRV DARK+FDEMPERTIVSWTAFFSGCIASGKHGDAIGLFKKMVESGVRPDSYSVVRVLSACVQVGDLDSAEWIANLVEE EMQKNSYVNTTLVNLYAKRGKMEKARSVFDSMGEKD VTWSTMIQGYASNSLPKEGVELFH+M+REDLKPDQYSIVGFLSSCASLGALDLGEWGS LIDRDEFLTNLVMGNALIDM+AKCGDM RGFQVFKDMKEKDRVIMNTAITGLAKNGHVK+SFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLR FNSISSVYSLKRTVEHYGCMVDLWGRAGQLS+AYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHE MKLISKITRREIVVRDNNRFHCFTNGTCSCNDYW
Sbjct:    1 MSIATVSSPSKLHQIKTLISVASSVNHLKQIHASLIHHDHHHDTYLVNLLLKRTLFFRENHYSSLLFSHTQFPNIFLYNTLINGFVNNNLFRETLDLFLSVRKHGLSLYGFTFPFVLKACIRSQNLTLGIELHPLVVKCGFNGDAGAMTSLLSLYSGSGRVDDARKMFDEMPERTIVSWTAFFSGCIASGKHGDAIGLFKKMVESGVRPDSYSVVRVLSACVQVGDLDSAEWIANLVEETEMQKNSYVNTTLVNLYAKRGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSLPKEGVELFHRMMREDLKPDQYSIVGFLSSCASLGALDLGEWGSNLIDRDEFLTNLVMGNALIDMYAKCGDMARGFQVFKDMKEKDRVIMNTAITGLAKNGHVKMSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRIFNSISSVYSLKRTVEHYGCMVDLWGRAGQLSDAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGTCSCNDYW 684

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BLAST of Bnascaffold772T0000400WE vs. GenBank_protein
Match: KAF3590101.1 (hypothetical protein F2Q69_00032154 [Brassica cretica])

HSP 1 Score: 1345 bits (3481), Expect = 0.000e+0
Identity = 668/684 (97.66%), Postives = 671/684 (98.10%), Query Frame = 0

Query:    1 MSIATVSSPSKLHQIKTLISVASTVNHLKQIHASLIHHDHHHDTYLVNLLLKRTLFFRENHYSFLLFSHTQFPNIFLYNTLINGFVNNNLFRETLDLFLSVREHGLSLYGFTFPFVLKACIRSQNLNLGIELHPLVVKCGFNRDAGAMTSLLSLYSGSGRVGDARKVFDEMPERTIVSWTAFFSGCIASGKHGDAIGLFKKMVESGVRPDSYSVVRVLSACVQVGDLDSAEWIANLVEEIEMQKNSYVNTTLVNLYAKRGKMEKARSVFDSMGEKDAVTWSTMIQGYASNSLPKEGVELFHQMLREDLKPDQYSIVGFLSSCASLGALDLGEWGSGLIDRDEFLTNLVMGNALIDMFAKCGDMTRGFQVFKDMKEKDRVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQLSEAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHEAMKLISKITRREIVVRDNNRFHCFTNGTCSCNDYW 684
            MSIATVSSPS LHQIKTLISVASTVNHLKQIHASLIHHDHHHDTYLVNLLLKRTLFFRENHYSFLLFSHTQFPNIFLYNTLINGF+NNNLFRETLDLFLSVREHGLSLY FTFPFVLKACIRSQNLNLGIELHPLVVKCGFNRDAGAMTSLLSLYSGSGRV DARKVFDEMPERTIVSWTAF SGCIASGKHGDAIGLF KMVESGVRPDSYSVVRVLSACVQVG LDSAEWIANLVEEIEM KNSYV  TLVNLYAK GKMEKARSVFDSM EKD VTWSTMIQGYASNSLPKEGVELFHQMLREDLKPDQYSIVGFLSSCASLGALDLGEWGSGLIDRDEFLTNLVMGNALIDM+AKCGDMTRGFQVFKDMKEKD VIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQLSEAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHEAMKLISKITRREIVVRDNNRFHCFTNG+CSCNDYW
Sbjct:    1 MSIATVSSPSILHQIKTLISVASTVNHLKQIHASLIHHDHHHDTYLVNLLLKRTLFFRENHYSFLLFSHTQFPNIFLYNTLINGFINNNLFRETLDLFLSVREHGLSLYCFTFPFVLKACIRSQNLNLGIELHPLVVKCGFNRDAGAMTSLLSLYSGSGRVDDARKVFDEMPERTIVSWTAFVSGCIASGKHGDAIGLFNKMVESGVRPDSYSVVRVLSACVQVGHLDSAEWIANLVEEIEMHKNSYVYATLVNLYAKGGKMEKARSVFDSMAEKDIVTWSTMIQGYASNSLPKEGVELFHQMLREDLKPDQYSIVGFLSSCASLGALDLGEWGSGLIDRDEFLTNLVMGNALIDMYAKCGDMTRGFQVFKDMKEKDGVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQLSEAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHEAMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 684

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BLAST of Bnascaffold772T0000400WE vs. GenBank_protein
Match: XP_018493174.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At3g08820 [Raphanus sativus])

HSP 1 Score: 1287 bits (3331), Expect = 0.000e+0
Identity = 645/691 (93.34%), Postives = 661/691 (95.66%), Query Frame = 0

Query:    1 MSIATVSSPSKLHQIKTLISVASTVNHLKQIHASLIHHDHHHD---TYLVNLLLKRTLFFRENHYSFLLFSHTQFPNIFLYNTLINGFVNNNLFRETLDLFLSVRE---HGLS-LYGFTFPFVLKACIRSQNLNLGIELHPLVVKCGFNRDAGAMTSLLSLYSGSGRVGDARKVFDEMPERTIVSWTAFFSGCIASGKHGDAIGLFKKMVESGVRPDSYSVVRVLSACVQVGDLDSAEWIANLVEEIEMQKNSYVNTTLVNLYAKRGKMEKARSVFDSMGEKDAVTWSTMIQGYASNSLPKEGVELFHQMLREDLKPDQYSIVGFLSSCASLGALDLGEWGSGLIDRDEFLTNLVMGNALIDMFAKCGDMTRGFQVFKDMKEKDRVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQLSEAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHEAMKLISKITRREIVVRDNNRFHCFTNGTCSCNDYW 684
            MSIATVSSPSKLH IKTLISVAST +HLKQIHASLIHH  +HD   +YL NLLLKRTL FRENHYSFLLFSHTQFPN+FLYNTLINGFVNNNLFRETLDLFLSVR    H LS L+GFTFPFVLKAC RSQNL LGIELHPLVVKCGFNRDAGAMTSLLSLYSGSGRV DARKVFDE+PERTIVSWTAFFSGCIASGKH DAIGLFKKMVE GVRPDSYSVVRVLSACVQVGDLDSAEWIA+LVEEIEM KNSYVNTTLVNLYAKRGKMEKAR VFDSMGEKD VTWSTMIQGYASNSLPKEGVELFHQMLRED+KPD+YSIVGFLSSCASLGALDLGEWGSGLIDRDEFLTN+VMGNALIDM+AKCG M+RGFQVFKDMKEKDRVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQL +AYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVR EMNKKGMKKLPGWSWIELEG VHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLIST  GEVIRVVKNLRVCGDCHE MKLISKITRREI+VRDNNRFHCFTNG+CSC+DYW
Sbjct:    1 MSIATVSSPSKLHHIKTLISVASTFHHLKQIHASLIHHALNHDDTSSYLFNLLLKRTLSFRENHYSFLLFSHTQFPNVFLYNTLINGFVNNNLFRETLDLFLSVRRQHHHALSSLHGFTFPFVLKACARSQNLQLGIELHPLVVKCGFNRDAGAMTSLLSLYSGSGRVDDARKVFDEIPERTIVSWTAFFSGCIASGKHSDAIGLFKKMVEMGVRPDSYSVVRVLSACVQVGDLDSAEWIADLVEEIEMLKNSYVNTTLVNLYAKRGKMEKARCVFDSMGEKDIVTWSTMIQGYASNSLPKEGVELFHQMLREDMKPDRYSIVGFLSSCASLGALDLGEWGSGLIDRDEFLTNIVMGNALIDMYAKCGAMSRGFQVFKDMKEKDRVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQLGDAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVRAEMNKKGMKKLPGWSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTVDGEVIRVVKNLRVCGDCHEVMKLISKITRREIIVRDNNRFHCFTNGSCSCSDYW 691

[Close]

BLAST of Bnascaffold772T0000400WE vs. GenBank_protein
Match: KAF8059962.1 (hypothetical protein N665_1223s0020 [Sinapis alba])

HSP 1 Score: 1270 bits (3287), Expect = 0.000e+0
Identity = 639/687 (93.01%), Postives = 650/687 (94.61%), Query Frame = 0

Query:    1 MSIATV--SSPSKLHQIKTLI-SVASTVNHLKQIHASLIHHDHHHDTYLVNLLLKRTLFFRENHYSFLLFSHTQFPNIFLYNTLINGFVNNNLFRETLDLFLSVREHGLSLYGFTFPFVLKACIRSQNLNLGIELHPLVVKCGFNRDAGAMTSLLSLYSGSGRVGDARKVFDEMPERTIVSWTAFFSGCIASGKHGDAIGLFKKMVESGVRPDSYSVVRVLSACVQVGDLDSAEWIANLVEEIEMQKNSYVNTTLVNLYAKRGKMEKARSVFDSMGEKDAVTWSTMIQGYASNSLPKEGVELFHQMLREDLKPDQYSIVGFLSSCASLGALDLGEWGSGLIDRDEFLTNLVMGNALIDMFAKCGDMTRGFQVFKDMKEKDRVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQLSEAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHEAMKLISKITRREIVVRDNNRFHCFTNGTCSCNDYW 684
            MSIATV  SS SKLHQIK LI SVASTVNHLKQIHAS+IHH  HHDT+LVNLLLKRTL FRENHYSFLLFSHTQFPNIFLYNTLINGFVNNNLFRETLDLFLSVR+HGLSLYGFTFPFVLKACIRSQNL LGIELH LVVKCGFNRD GAMTSLLSLYSGSGRV DARKVFDEMPERTIVSWTAFFSGCIASGKH DAIGLFK+MVE GVRPDSYSVVRVLSACVQVGDLDSAEWIANLVE         V  TLVNLYAKRGKMEKAR VFDSM EKD VTWSTMIQGYASNSLPK+GVELFHQMLREDLKPDQYSIVGFLSSCASLGALDLGEWGS LIDRDEFLTNLVMGNALIDM+AKCG M RGFQVFKDMKEKDRVIMNT ITGLAKNGHVKLS AVFGQTEKLGISPDGYTFLGLLCGCVHAGLI+DGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQL +AYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEG VHEFLADDKSHPL+DKIYAKLEDLGNEMRLMGFVPTTE VMFDVEEEEKETVLGYHSEKLAVALGLIST HGEVIRVVKNLRVCGDCHEAMKLISKI+RREIVVRDNNRFHCFTNG+CSCNDYW
Sbjct:    1 MSIATVVSSSSSKLHQIKNLIISVASTVNHLKQIHASIIHHALHHDTFLVNLLLKRTLSFRENHYSFLLFSHTQFPNIFLYNTLINGFVNNNLFRETLDLFLSVRKHGLSLYGFTFPFVLKACIRSQNLKLGIELHSLVVKCGFNRDVGAMTSLLSLYSGSGRVDDARKVFDEMPERTIVSWTAFFSGCIASGKHSDAIGLFKEMVEIGVRPDSYSVVRVLSACVQVGDLDSAEWIANLVEXXXXXXXXXVYATLVNLYAKRGKMEKARFVFDSMVEKDIVTWSTMIQGYASNSLPKDGVELFHQMLREDLKPDQYSIVGFLSSCASLGALDLGEWGSSLIDRDEFLTNLVMGNALIDMYAKCGAMARGFQVFKDMKEKDRVIMNTVITGLAKNGHVKLSLAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIKDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQLGDAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGKVHEFLADDKSHPLTDKIYAKLEDLGNEMRLMGFVPTTENVMFDVEEEEKETVLGYHSEKLAVALGLISTVHGEVIRVVKNLRVCGDCHEAMKLISKISRREIVVRDNNRFHCFTNGSCSCNDYW 687

[Close]

BLAST of Bnascaffold772T0000400WE vs. GenBank_protein
Match: XP_006418524.1 (putative pentatricopeptide repeat-containing protein At3g08820 [Eutrema salsugineum] >ESQ36960.1 hypothetical protein EUTSA_v10002816mg [Eutrema salsugineum])

HSP 1 Score: 1209 bits (3128), Expect = 0.000e+0
Identity = 598/685 (87.30%), Postives = 637/685 (92.99%), Query Frame = 0

Query:    1 MSIAT-VSSPSKLHQIKTLISVASTVNHLKQIHASLIHHDHHHDTYLVNLLLKRTLFFRENHYSFLLFSHTQFPNIFLYNTLINGFVNNNLFRETLDLFLSVREHGLSLYGFTFPFVLKACIRSQNLNLGIELHPLVVKCGFNRDAGAMTSLLSLYSGSGRVGDARKVFDEMPERTIVSWTAFFSGCIASGKHGDAIGLFKKMVESGVRPDSYSVVRVLSACVQVGDLDSAEWIANLVEEIEMQKNSYVNTTLVNLYAKRGKMEKARSVFDSMGEKDAVTWSTMIQGYASNSLPKEGVELFHQMLREDLKPDQYSIVGFLSSCASLGALDLGEWGSGLIDRDEFLTNLVMGNALIDMFAKCGDMTRGFQVFKDMKEKDRVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQLSEAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHEAMKLISKITRREIVVRDNNRFHCFTNGTCSCNDYW 684
            M+IAT  SS SK  QIKTLIS+ASTVNHLK IHASLI HD HHDT+L+NLLLKRTLFFR+NHYSFLLFSHTQFPNIFLY+TLINGFVNN+LF ETL LFLS R+HGLSL+GFTFPFVLKAC RSQNL LGI+LH LVVKCGF+ D  AMTSLLS+YSGSGR+ DA K+FDE+PER++VSWTAF SG I++GKH +AI LF++MVE GVRPDSY +VRVL+ACV+VGDLDSAEWI  LVEEI M KN +V TTLVNLYAKRGKMEKARSVFDSM EKD VTWSTMIQGYASNSLPKEGVELF QMLRE+LKPDQYSIVGFLSSCASLGALDLGEWGS LIDR EFL NLVMGNALIDM+AKCG M RGFQVFKDMKE+DRVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFN++S +YSLKRTVEHYGCMVDLWGRAG L +AYRLICDMPMKPNAIIWGALL+GCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSV GRWDEAAEVR+ MNKKGMKK+PG+SWIEL+GTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVA GLIST HGEVIRVVKNLRVCGDCHE MKLISKIT+REIVVRDNNRFHCFTNG CSCNDYW
Sbjct:    1 MNIATNTSSASKAQQIKTLISIASTVNHLKHIHASLIRHDLHHDTFLINLLLKRTLFFRQNHYSFLLFSHTQFPNIFLYDTLINGFVNNHLFHETLGLFLSTRKHGLSLHGFTFPFVLKACTRSQNLKLGIDLHSLVVKCGFSHDVCAMTSLLSVYSGSGRLDDAHKLFDEIPERSVVSWTAFVSGYISAGKHREAIDLFREMVEMGVRPDSYLIVRVLTACVRVGDLDSAEWIDKLVEEIGMPKNCFVCTTLVNLYAKRGKMEKARSVFDSMAEKDIVTWSTMIQGYASNSLPKEGVELFLQMLRENLKPDQYSIVGFLSSCASLGALDLGEWGSSLIDRHEFLNNLVMGNALIDMYAKCGAMARGFQVFKDMKERDRVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNAMSCIYSLKRTVEHYGCMVDLWGRAGLLGDAYRLICDMPMKPNAIIWGALLSGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDTMNKKGMKKIPGFSWIELKGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVAFGLISTVHGEVIRVVKNLRVCGDCHEVMKLISKITKREIVVRDNNRFHCFTNGFCSCNDYW 685

[Close]

BLAST of Bnascaffold772T0000400WE vs. GenBank_protein
Match: VVA96914.1 (unnamed protein product [Arabis nemorensis])

HSP 1 Score: 1202 bits (3111), Expect = 0.000e+0
Identity = 590/685 (86.13%), Postives = 633/685 (92.41%), Query Frame = 0

Query:    1 MSIATVSSP-SKLHQIKTLISVASTVNHLKQIHASLIHHDHHHDTYLVNLLLKRTLFFRENHYSFLLFSHTQFPNIFLYNTLINGFVNNNLFRETLDLFLSVREHGLSLYGFTFPFVLKACIRSQNLNLGIELHPLVVKCGFNRDAGAMTSLLSLYSGSGRVGDARKVFDEMPERTIVSWTAFFSGCIASGKHGDAIGLFKKMVESGVRPDSYSVVRVLSACVQVGDLDSAEWIANLVEEIEMQKNSYVNTTLVNLYAKRGKMEKARSVFDSMGEKDAVTWSTMIQGYASNSLPKEGVELFHQMLREDLKPDQYSIVGFLSSCASLGALDLGEWGSGLIDRDEFLTNLVMGNALIDMFAKCGDMTRGFQVFKDMKEKDRVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQLSEAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHEAMKLISKITRREIVVRDNNRFHCFTNGTCSCNDYW 684
            MSI +VSS  SK+ QIKTLIS AS +NHLK  HASLI H+ HHDT+LVNLLLKRTLFFR+NHYSFLLFSHTQFPNIFLYNTLINGFVNN+LF ETLDLFLSVR+ GLSLYGFTFPFVLKAC ++QNLNLGI LH LVVKCGF  D GAMTSLLS+YSGSGR+ DA KVFDE+PER++VSWTAF SGCIA+GK  +AI LFKKMVE GVRPDSYS+VRVL+ACV VGDLD AEWI  L++EIEM KNS+V  TLVNLYAKRGKMEKARSVFDSM EKD VTWSTMIQGYASNS PKEGVELFHQML+E+LKPDQYSIVGFLSSCASLGALDLGEWGS LIDR+EFLTNLVMG ALIDM+AKCG M RGFQVFK+MKE+DRV+MN AITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLI+DGLR F +IS VY+LKRTVEHYGCM+DLWGRAG L +AYRLICDMPMKPNAI+WGALL+GCRLVK+T+LAE VLKELIALEPWNAGNYVQLSNIYSV GRWDEAAEVR+ MNKKG+KK+PG+SWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKE VLGYHSEKLAVA GLIST HGEVIRVVKNLRVCGDCHE MKLISKITRREIVVRDNNRFHCFTNG+CSCNDYW
Sbjct:    1 MSIVSVSSSTSKVQQIKTLISFASNINHLKHFHASLIRHNLHHDTFLVNLLLKRTLFFRQNHYSFLLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSVRKLGLSLYGFTFPFVLKACTKAQNLNLGIHLHSLVVKCGFYHDVGAMTSLLSMYSGSGRLDDAHKVFDEIPERSVVSWTAFISGCIAAGKQREAIDLFKKMVEMGVRPDSYSIVRVLTACVSVGDLDRAEWIVKLMDEIEMSKNSFVCATLVNLYAKRGKMEKARSVFDSMAEKDIVTWSTMIQGYASNSFPKEGVELFHQMLQENLKPDQYSIVGFLSSCASLGALDLGEWGSSLIDRNEFLTNLVMGTALIDMYAKCGAMARGFQVFKEMKERDRVLMNAAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIEDGLRMFIAISCVYALKRTVEHYGCMIDLWGRAGMLDDAYRLICDMPMKPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVTGRWDEAAEVRDTMNKKGLKKIPGFSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKERVLGYHSEKLAVAFGLISTVHGEVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685

[Close]

BLAST of Bnascaffold772T0000400WE vs. GenBank_protein
Match: XP_002884698.1 (putative pentatricopeptide repeat-containing protein At3g08820 [Arabidopsis lyrata subsp. lyrata] >EFH60957.1 pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 1172 bits (3031), Expect = 0.000e+0
Identity = 574/685 (83.80%), Postives = 624/685 (91.09%), Query Frame = 0

Query:    1 MSIATV-SSPSKLHQIKTLISVASTVNHLKQIHASLIHHDHHHDTYLVNLLLKRTLFFRENHYSFLLFSHTQFPNIFLYNTLINGFVNNNLFRETLDLFLSVREHGLSLYGFTFPFVLKACIRSQNLNLGIELHPLVVKCGFNRDAGAMTSLLSLYSGSGRVGDARKVFDEMPERTIVSWTAFFSGCIASGKHGDAIGLFKKMVESGVRPDSYSVVRVLSACVQVGDLDSAEWIANLVEEIEMQKNSYVNTTLVNLYAKRGKMEKARSVFDSMGEKDAVTWSTMIQGYASNSLPKEGVELFHQMLREDLKPDQYSIVGFLSSCASLGALDLGEWGSGLIDRDEFLTNLVMGNALIDMFAKCGDMTRGFQVFKDMKEKDRVIMNTAITGLAKNGHVKLSFAVFGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVEHYGCMVDLWGRAGQLSEAYRLICDMPMKPNAIIWGALLTGCRLVKETRLAERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLPGWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECVMFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHEAMKLISKITRREIVVRDNNRFHCFTNGTCSCNDYW 684
            MSI TV SS SK+ QIKTLISVAST NHLKQ+H SLIHH  HHDT+LVNLLLKRTLFFR+ HYSFLLFSHTQFPNIFLYNTLINGFVNN+LF ETLDLFLS+R+HGL+L+GFTFP VLKAC R+ N  LGI+LH LVVKCGFN D  AMTSLLS+YSGSGR+ DA KVF+E+PER++V+WTA FSG   +GKH +AI LFKKMVE GVRPDSY +V+VLSACV VGDLDS EWI   +EE+EMQKNS+V TTLVNLYAK GKMEKARSVFDSMGEKD VTWSTMIQGYASNS PKEG+E F QML+E+LKPDQ+SIVGFLSSCASLGALDLGEWG  LIDR EFLTNL M NALIDM+AKCG M RGF+VFK+MKEKD VIMN AI+GLAKNGHVKLSFAVFGQTEKLGISPDG TFLGLLCGCVHAGLIQDGLRFFN+IS VY+LKRTVEHYGCMVDLWGRAG L +AYRLICDMPM+PNAI+WGALL+GCRLVK+T+LAE VLKELIALEPWNAGNYVQLSNIYSV+GRWDEAAEVR+ MN+KGMKK+PG+SWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTE V FDVE+EEKE VLG+HSEKLAVA GLIST HG+VIRVVKNLRVCGDCHE MKLISKITRREIVVRDNNRFHCFTNG+CSCNDYW
Sbjct:    1 MSIVTVPSSTSKVQQIKTLISVASTFNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVLGHHSEKLAVAFGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685

The following BLAST results are available for this feature:

BLAST of Bnascaffold772T0000400WE vs. GenBank_protein

BLAST of Bnascaffold772T0000400WE vs. GenBank_protein
Analysis Date: 2022-04-13 (Diamond on OGS1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
XP_013697667.1	0.000e+0	98.39	putative pentatricopeptide repeat-containing prote...	[more]
XP_013587304.1	0.000e+0	97.81	PREDICTED: putative pentatricopeptide repeat-conta...	[more]
VDD47009.1	0.000e+0	97.66	unnamed protein product [Brassica oleracea]	[more]
XP_009146978.1	0.000e+0	97.37	putative pentatricopeptide repeat-containing prote...	[more]
KAF3590101.1	0.000e+0	97.66	hypothetical protein F2Q69_00032154 [Brassica cret...	[more]
XP_018493174.1	0.000e+0	93.34	PREDICTED: putative pentatricopeptide repeat-conta...	[more]
KAF8059962.1	0.000e+0	93.01	hypothetical protein N665_1223s0020 [Sinapis alba]	[more]
XP_006418524.1	0.000e+0	87.30	putative pentatricopeptide repeat-containing prote...	[more]
VVA96914.1	0.000e+0	86.13	unnamed protein product [Arabis nemorensis]	[more]
XP_002884698.1	0.000e+0	83.80	putative pentatricopeptide repeat-containing prote...	[more]

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GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

InterPro

Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-04-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 149..174 e-value: 0.0032 score: 15.5 coord: 250..275 e-value: 9.8E-5 score: 20.3 coord: 77..107 e-value: 2.4E-4 score: 19.1 coord: 278..311 e-value: 5.6E-8 score: 30.5 coord: 351..377 e-value: 3.3E-4 score: 18.6 coord: 177..211 e-value: 3.6E-6 score: 24.8
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 351..376 e-value: 3.5E-4 score: 20.6 coord: 77..106 e-value: 0.0015 score: 18.7 coord: 149..174 e-value: 0.0038 score: 17.4 coord: 451..476 e-value: 0.11 score: 12.8 coord: 523..545 e-value: 0.015 score: 15.5 coord: 379..409 e-value: 0.75 score: 10.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 175..221 e-value: 2.3E-7 score: 30.9 coord: 275..323 e-value: 3.6E-8 score: 33.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 276..310 score: 12.276713
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 514..548 score: 9.273317
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 74..108 score: 9.843305
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 346..380 score: 9.152743
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 144..174 score: 8.823904
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 175..209 score: 11.027125
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 245..275 score: 8.801982
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 235..334 e-value: 1.3E-19 score: 72.8 coord: 336..556 e-value: 8.0E-36 score: 126.0 coord: 17..132 e-value: 4.6E-7 score: 31.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 133..232 e-value: 3.8E-20 score: 74.0
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 550..673 e-value: 1.9E-39 score: 134.4
None	No IPR available	PANTHER	PTHR47925:SF63	BNAA05G29400D PROTEIN	coord: 13..628
None	No IPR available	PANTHER	PTHR47925	OS01G0913400 PROTEIN-RELATED	coord: 13..628

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold772	contig	scaffold772:14073..16127 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Interproscan on OGS1.0	2022-04-13 .72417
Blast2go on OGS1.0	2022-04-13 .735315
Diamond on OGS1.0 vs NR	2022-04-13 .782894
Brassica napus Westar OGS1.0	2022-04-13 .642364

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Bnascaffold772T0000400WE	Bnascaffold772T0000400WE	Brassica napus Westar	mRNA	scaffold772 14073..16127 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Bnascaffold772T0000400WE-P ID=Bnascaffold772T0000400WE-P|Name=Bnascaffold772T0000400WE|organism=Brassica napus Westar|type=polypeptide|length=685bp
MSIATVSSPSKLHQIKTLISVASTVNHLKQIHASLIHHDHHHDTYLVNLL
LKRTLFFRENHYSFLLFSHTQFPNIFLYNTLINGFVNNNLFRETLDLFLS
VREHGLSLYGFTFPFVLKACIRSQNLNLGIELHPLVVKCGFNRDAGAMTS
LLSLYSGSGRVGDARKVFDEMPERTIVSWTAFFSGCIASGKHGDAIGLFK
KMVESGVRPDSYSVVRVLSACVQVGDLDSAEWIANLVEEIEMQKNSYVNT
TLVNLYAKRGKMEKARSVFDSMGEKDAVTWSTMIQGYASNSLPKEGVELF
HQMLREDLKPDQYSIVGFLSSCASLGALDLGEWGSGLIDRDEFLTNLVMG
NALIDMFAKCGDMTRGFQVFKDMKEKDRVIMNTAITGLAKNGHVKLSFAV
FGQTEKLGISPDGYTFLGLLCGCVHAGLIQDGLRFFNSISSVYSLKRTVE
HYGCMVDLWGRAGQLSEAYRLICDMPMKPNAIIWGALLTGCRLVKETRLA
ERVLKELIALEPWNAGNYVQLSNIYSVNGRWDEAAEVREEMNKKGMKKLP
GWSWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTECV
MFDVEEEEKETVLGYHSEKLAVALGLISTGHGEVIRVVKNLRVCGDCHEA
MKLISKITRREIVVRDNNRFHCFTNGTCSCNDYW.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032867	DYW_dom
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

Orthology

View orthology data for Bnascaffold772T0000400WE-P