Bnascaffold760T0000400WE-P (polypeptide) Brassica napus Westar

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameBnascaffold760T0000400WE
Unique NameBnascaffold760T0000400WE-P
Typepolypeptide
OrganismBrassica napus Westar (cv. Westar, rapeseed)
Sequence length259
Homology
BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Match: XP_022549860.1 (glutathione S-transferase T3-like [Brassica napus])

HSP 1 Score: 526 bits (1354), Expect = 2.100e-188
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
Query:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258
            MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM
Sbjct:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258          
BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Match: XP_022558300.1 (glutathione S-transferase T3-like [Brassica napus])

HSP 1 Score: 520 bits (1338), Expect = 2.770e-184
Identity = 255/258 (98.84%), Postives = 255/258 (98.84%), Query Frame = 0
Query:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258
            MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDI FKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADG DEAEGRPIGVKAAKAASKKKKSGKEESL KIHAIM
Sbjct:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDIFFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGEDEAEGRPIGVKAAKAASKKKKSGKEESLTKIHAIM 258          
BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Match: XP_033141331.1 (glutathione S-transferase T3-like [Brassica rapa])

HSP 1 Score: 513 bits (1320), Expect = 1.290e-182
Identity = 252/258 (97.67%), Postives = 253/258 (98.06%), Query Frame = 0
Query:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258
            MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGP ESVVEPVVESGGDPKERRKW PKEDKILIGAWLNTSKDAVVSNDQRAGAFWK IVDYYNASPQLAGTIPREVCSCKKRWGRIN DVSKFAGCYDAALREQRSGQNDDDVMKAAIDI FKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGG+EAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM
Sbjct:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPTESVVEPVVESGGDPKERRKWTPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKHIVDYYNASPQLAGTIPREVCSCKKRWGRINTDVSKFAGCYDAALREQRSGQNDDDVMKAAIDIFFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGNEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258          
BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Match: XP_033141087.1 (glutathione S-transferase T3-like [Brassica rapa])

HSP 1 Score: 505 bits (1300), Expect = 1.440e-179
Identity = 249/258 (96.51%), Postives = 250/258 (96.90%), Query Frame = 0
Query:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258
            MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKW PKEDKILIGAWLNTSKD VVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRIN DVSKFAGCYDAALREQRSGQNDDDVMKAAIDI FKTN YKF MDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGG+EAEGR IGVKAAKAASKK KSGKEESLAKIHAIM
Sbjct:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWTPKEDKILIGAWLNTSKDVVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINTDVSKFAGCYDAALREQRSGQNDDDVMKAAIDIFFKTNAYKFGMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGNEAEGRLIGVKAAKAASKKNKSGKEESLAKIHAIM 258          
BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Match: XP_033146553.1 (glutathione S-transferase T3-like isoform X1 [Brassica rapa])

HSP 1 Score: 499 bits (1284), Expect = 1.140e-177
Identity = 248/258 (96.12%), Postives = 249/258 (96.51%), Query Frame = 0
Query:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258
            MYLRLKVAYLRLCVAIRATQNILKTMDPKTSY NLLFSQSQTTVDLDSPEPFWLGSQGPNESVVE    SGGDPKERRKW PKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRIN DVSKFAGCYDAALREQRSGQ DDDVMKAAIDI FKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGG+EAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM
Sbjct:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYINLLFSQSQTTVDLDSPEPFWLGSQGPNESVVE----SGGDPKERRKWSPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINTDVSKFAGCYDAALREQRSGQKDDDVMKAAIDIFFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGNEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 254          
BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Match: XP_022546558.1 (glutathione S-transferase T3-like [Brassica napus])

HSP 1 Score: 490 bits (1261), Expect = 2.840e-174
Identity = 237/239 (99.16%), Postives = 237/239 (99.16%), Query Frame = 0
Query:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAA 239
            MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRIN DVSKFAGCYDAALREQRSGQNDDDVMKAAIDI FKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAA
Sbjct:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINTDVSKFAGCYDAALREQRSGQNDDDVMKAAIDIFFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAA 239          
BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Match: XP_022562303.1 (glutathione S-transferase T3-like [Brassica napus])

HSP 1 Score: 479 bits (1234), Expect = 6.640e-170
Identity = 231/233 (99.14%), Postives = 232/233 (99.57%), Query Frame = 0
Query:   26 MDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258
            MDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAV+SNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDI FKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM
Sbjct:    1 MDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVISNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDIFFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 233          
BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Match: XP_013595018.1 (PREDICTED: glutathione S-transferase T3-like [Brassica oleracea var. oleracea])

HSP 1 Score: 457 bits (1177), Expect = 2.790e-161
Identity = 224/233 (96.14%), Postives = 225/233 (96.57%), Query Frame = 0
Query:   26 MDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258
            MDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNE    PVVESGGDPKERRKW PKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIV+YYNASPQLAGT PREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDI  KTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM
Sbjct:    1 MDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNE----PVVESGGDPKERRKWSPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVEYYNASPQLAGTTPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDIFLKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 229          
BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Match: VDD56214.1 (unnamed protein product, partial [Brassica oleracea])

HSP 1 Score: 385 bits (989), Expect = 2.890e-133
Identity = 186/189 (98.41%), Postives = 186/189 (98.41%), Query Frame = 0
Query:   70 SGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258
            SGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKK WGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDI FKTND KFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM
Sbjct:    1 SGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKLWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDIFFKTNDNKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 189          
BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Match: XP_013601502.1 (PREDICTED: glutathione S-transferase T3-like [Brassica oleracea var. oleracea])

HSP 1 Score: 385 bits (988), Expect = 6.680e-132
Identity = 185/192 (96.35%), Postives = 187/192 (97.40%), Query Frame = 0
Query:   67 VVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258
            + ESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRI DYYNASPQLAGTIPREVCSCKK WGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDI FKTND KFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAI+
Sbjct:   77 IPESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIADYYNASPQLAGTIPREVCSCKKLWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDIFFKTNDNKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAII 268          
The following BLAST results are available for this feature:
BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Analysis Date: 2022-04-13 (Diamond on OGS1.0 vs NR)
Total hits: 20
Match NameE-valueIdentityDescription
XP_022549860.12.100e-188100.00glutathione S-transferase T3-like [Brassica napus][more]
XP_022558300.12.770e-18498.84glutathione S-transferase T3-like [Brassica napus][more]
XP_033141331.11.290e-18297.67glutathione S-transferase T3-like [Brassica rapa][more]
XP_033141087.11.440e-17996.51glutathione S-transferase T3-like [Brassica rapa][more]
XP_033146553.11.140e-17796.12glutathione S-transferase T3-like isoform X1 [Bras... [more]
XP_022546558.12.840e-17499.16glutathione S-transferase T3-like [Brassica napus][more]
XP_022562303.16.640e-17099.14glutathione S-transferase T3-like [Brassica napus][more]
XP_013595018.12.790e-16196.14PREDICTED: glutathione S-transferase T3-like [Bras... [more]
VDD56214.12.890e-13398.41unnamed protein product, partial [Brassica olerace... [more]
XP_013601502.16.680e-13296.35PREDICTED: glutathione S-transferase T3-like [Bras... [more]

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InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-04-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..231
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..258
NoneNo IPR availablePANTHERPTHR45023:SF4OS07G0575233 PROTEINcoord: 43..249
NoneNo IPR availablePANTHERPTHR45023FAMILY NOT NAMEDcoord: 43..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold760contigscaffold760:15755..16531 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Interproscan on OGS1.02022-04-13 .72417
Diamond on OGS1.0 vs NR2022-04-13 .782894
Brassica napus Westar OGS1.02022-04-13 .642364
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Bnascaffold760T0000400WEBnascaffold760T0000400WEBrassica napus WestarmRNAscaffold760 15755..16531 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Bnascaffold760T0000400WE-P ID=Bnascaffold760T0000400WE-P|Name=Bnascaffold760T0000400WE|organism=Brassica napus Westar|type=polypeptide|length=259bp
MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPE
PFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAV
VSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFA
GCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKW
CSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEES
LAKIHAIM.
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