Bnascaffold760T0000400WE-P (polypeptide) Brassica napus Westar

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Bnascaffold760T0000400WE
Unique Name	Bnascaffold760T0000400WE-P
Type	polypeptide
Organism	Brassica napus Westar (cv. Westar, rapeseed)
Sequence length	259

Homology

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BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Match: XP_022549860.1 (glutathione S-transferase T3-like [Brassica napus])

HSP 1 Score: 526 bits (1354), Expect = 2.100e-188
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0

Query:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258
            MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM
Sbjct:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258

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BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Match: XP_022558300.1 (glutathione S-transferase T3-like [Brassica napus])

HSP 1 Score: 520 bits (1338), Expect = 2.770e-184
Identity = 255/258 (98.84%), Postives = 255/258 (98.84%), Query Frame = 0

Query:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258
            MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDI FKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADG DEAEGRPIGVKAAKAASKKKKSGKEESL KIHAIM
Sbjct:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDIFFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGEDEAEGRPIGVKAAKAASKKKKSGKEESLTKIHAIM 258

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BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Match: XP_033141331.1 (glutathione S-transferase T3-like [Brassica rapa])

HSP 1 Score: 513 bits (1320), Expect = 1.290e-182
Identity = 252/258 (97.67%), Postives = 253/258 (98.06%), Query Frame = 0

Query:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258
            MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGP ESVVEPVVESGGDPKERRKW PKEDKILIGAWLNTSKDAVVSNDQRAGAFWK IVDYYNASPQLAGTIPREVCSCKKRWGRIN DVSKFAGCYDAALREQRSGQNDDDVMKAAIDI FKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGG+EAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM
Sbjct:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPTESVVEPVVESGGDPKERRKWTPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKHIVDYYNASPQLAGTIPREVCSCKKRWGRINTDVSKFAGCYDAALREQRSGQNDDDVMKAAIDIFFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGNEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258

[Close]

BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Match: XP_033141087.1 (glutathione S-transferase T3-like [Brassica rapa])

HSP 1 Score: 505 bits (1300), Expect = 1.440e-179
Identity = 249/258 (96.51%), Postives = 250/258 (96.90%), Query Frame = 0

Query:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258
            MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKW PKEDKILIGAWLNTSKD VVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRIN DVSKFAGCYDAALREQRSGQNDDDVMKAAIDI FKTN YKF MDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGG+EAEGR IGVKAAKAASKK KSGKEESLAKIHAIM
Sbjct:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWTPKEDKILIGAWLNTSKDVVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINTDVSKFAGCYDAALREQRSGQNDDDVMKAAIDIFFKTNAYKFGMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGNEAEGRLIGVKAAKAASKKNKSGKEESLAKIHAIM 258

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BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Match: XP_033146553.1 (glutathione S-transferase T3-like isoform X1 [Brassica rapa])

HSP 1 Score: 499 bits (1284), Expect = 1.140e-177
Identity = 248/258 (96.12%), Postives = 249/258 (96.51%), Query Frame = 0

Query:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258
            MYLRLKVAYLRLCVAIRATQNILKTMDPKTSY NLLFSQSQTTVDLDSPEPFWLGSQGPNESVVE    SGGDPKERRKW PKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRIN DVSKFAGCYDAALREQRSGQ DDDVMKAAIDI FKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGG+EAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM
Sbjct:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYINLLFSQSQTTVDLDSPEPFWLGSQGPNESVVE----SGGDPKERRKWSPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINTDVSKFAGCYDAALREQRSGQKDDDVMKAAIDIFFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGNEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 254

[Close]

BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Match: XP_022546558.1 (glutathione S-transferase T3-like [Brassica napus])

HSP 1 Score: 490 bits (1261), Expect = 2.840e-174
Identity = 237/239 (99.16%), Postives = 237/239 (99.16%), Query Frame = 0

Query:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAA 239
            MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRIN DVSKFAGCYDAALREQRSGQNDDDVMKAAIDI FKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAA
Sbjct:    1 MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINTDVSKFAGCYDAALREQRSGQNDDDVMKAAIDIFFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAA 239

[Close]

BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Match: XP_022562303.1 (glutathione S-transferase T3-like [Brassica napus])

HSP 1 Score: 479 bits (1234), Expect = 6.640e-170
Identity = 231/233 (99.14%), Postives = 232/233 (99.57%), Query Frame = 0

Query:   26 MDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258
            MDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAV+SNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDI FKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM
Sbjct:    1 MDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVISNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDIFFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 233

[Close]

BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Match: XP_013595018.1 (PREDICTED: glutathione S-transferase T3-like [Brassica oleracea var. oleracea])

HSP 1 Score: 457 bits (1177), Expect = 2.790e-161
Identity = 224/233 (96.14%), Postives = 225/233 (96.57%), Query Frame = 0

Query:   26 MDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258
            MDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNE    PVVESGGDPKERRKW PKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIV+YYNASPQLAGT PREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDI  KTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM
Sbjct:    1 MDPKTSYTNLLFSQSQTTVDLDSPEPFWLGSQGPNE----PVVESGGDPKERRKWSPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVEYYNASPQLAGTTPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDIFLKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 229

[Close]

BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Match: VDD56214.1 (unnamed protein product, partial [Brassica oleracea])

HSP 1 Score: 385 bits (989), Expect = 2.890e-133
Identity = 186/189 (98.41%), Postives = 186/189 (98.41%), Query Frame = 0

Query:   70 SGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258
            SGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKK WGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDI FKTND KFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM
Sbjct:    1 SGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKLWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDIFFKTNDNKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 189

[Close]

BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Match: XP_013601502.1 (PREDICTED: glutathione S-transferase T3-like [Brassica oleracea var. oleracea])

HSP 1 Score: 385 bits (988), Expect = 6.680e-132
Identity = 185/192 (96.35%), Postives = 187/192 (97.40%), Query Frame = 0

Query:   67 VVESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAIM 258
            + ESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRI DYYNASPQLAGTIPREVCSCKK WGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDI FKTND KFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAI+
Sbjct:   77 IPESGGDPKERRKWCPKEDKILIGAWLNTSKDAVVSNDQRAGAFWKRIADYYNASPQLAGTIPREVCSCKKLWGRINADVSKFAGCYDAALREQRSGQNDDDVMKAAIDIFFKTNDNKFSMDHCWRELRHDQKWCSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEESLAKIHAII 268

The following BLAST results are available for this feature:

BLAST of Bnascaffold760T0000400WE vs. GenBank_protein

BLAST of Bnascaffold760T0000400WE vs. GenBank_protein
Analysis Date: 2022-04-13 (Diamond on OGS1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
XP_022549860.1	2.100e-188	100.00	glutathione S-transferase T3-like [Brassica napus]	[more]
XP_022558300.1	2.770e-184	98.84	glutathione S-transferase T3-like [Brassica napus]	[more]
XP_033141331.1	1.290e-182	97.67	glutathione S-transferase T3-like [Brassica rapa]	[more]
XP_033141087.1	1.440e-179	96.51	glutathione S-transferase T3-like [Brassica rapa]	[more]
XP_033146553.1	1.140e-177	96.12	glutathione S-transferase T3-like isoform X1 [Bras...	[more]
XP_022546558.1	2.840e-174	99.16	glutathione S-transferase T3-like [Brassica napus]	[more]
XP_022562303.1	6.640e-170	99.14	glutathione S-transferase T3-like [Brassica napus]	[more]
XP_013595018.1	2.790e-161	96.14	PREDICTED: glutathione S-transferase T3-like [Bras...	[more]
VDD56214.1	2.890e-133	98.41	unnamed protein product, partial [Brassica olerace...	[more]
XP_013601502.1	6.680e-132	96.35	PREDICTED: glutathione S-transferase T3-like [Bras...	[more]

Pages

InterPro

Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-04-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..258
None	No IPR available	PANTHER	PTHR45023:SF4	OS07G0575233 PROTEIN	coord: 43..249
None	No IPR available	PANTHER	PTHR45023	FAMILY NOT NAMED	coord: 43..249

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold760	contig	scaffold760:15755..16531 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Interproscan on OGS1.0	2022-04-13 .72417
Diamond on OGS1.0 vs NR	2022-04-13 .782894
Brassica napus Westar OGS1.0	2022-04-13 .642364

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Bnascaffold760T0000400WE	Bnascaffold760T0000400WE	Brassica napus Westar	mRNA	scaffold760 15755..16531 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Bnascaffold760T0000400WE-P ID=Bnascaffold760T0000400WE-P|Name=Bnascaffold760T0000400WE|organism=Brassica napus Westar|type=polypeptide|length=259bp
MYLRLKVAYLRLCVAIRATQNILKTMDPKTSYTNLLFSQSQTTVDLDSPE
PFWLGSQGPNESVVEPVVESGGDPKERRKWCPKEDKILIGAWLNTSKDAV
VSNDQRAGAFWKRIVDYYNASPQLAGTIPREVCSCKKRWGRINADVSKFA
GCYDAALREQRSGQNDDDVMKAAIDILFKTNDYKFSMDHCWRELRHDQKW
CSTYGPKECGKEKRKGDVEADGGDEAEGRPIGVKAAKAASKKKKSGKEES
LAKIHAIM.

Orthology

View orthology data for Bnascaffold760T0000400WE-P