Bnascaffold724T0000100WE-P (polypeptide) Brassica napus Westar

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameBnascaffold724T0000100WE
Unique NameBnascaffold724T0000100WE-P
Typepolypeptide
OrganismBrassica napus Westar (cv. Westar, rapeseed)
Sequence length415
Homology
BLAST of Bnascaffold724T0000100WE vs. GenBank_protein
Match: CAF2043664.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 569 bits (1466), Expect = 1.290e-200
Identity = 289/355 (81.41%), Postives = 293/355 (82.54%), Query Frame = 0
Query:  108 DVRSVLTCGGEFNSRHIVRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKY------REHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV------------------------------------------LPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWARGSQFRTRRLLAGCLSC 414
            D RS+LT  GEFNSRHIVRRSGPKALDDPKSS +PQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGE PIANK        +H PHGVPRHLRAQGVGLWAPHSTRLETRTKESDM ASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV                                          LPTLET QPEVGSSGWKSTAR VV  AFPAALENPEDRVPLTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWA+ SQFRTRRLLAGCLSC
Sbjct:   40 DARSILTSVGEFNSRHIVRRSGPKALDDPKSSAQPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGETPIANKRCCLNRGLQHVPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMYASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSVARPIPGRRGKSQASMSRMARWSLQNLGREPGRSSRWCRSRWYLPTLETGQPEVGSSGWKSTARHVVCNAFPAALENPEDRVPLTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWAQRSQFRTRRLLAGCLSC 394          
BLAST of Bnascaffold724T0000100WE vs. GenBank_protein
Match: CDY19789.1 (BnaA09g04420D [Brassica napus])

HSP 1 Score: 528 bits (1359), Expect = 4.740e-185
Identity = 265/310 (85.48%), Postives = 266/310 (85.81%), Query Frame = 0
Query:  108 DVRSVLTCGGEFNSRHIVRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV-----------------------------------------LPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR 376
            +VRSVLTCGGEFNSR IV R GPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV                                         LPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR
Sbjct:   40 NVRSVLTCGGEFNSRQIVSRFGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSVARPIPGRRGKSQASMSRRARRSLQNLGREPGRSGRRGRSWCLPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR 349          
BLAST of Bnascaffold724T0000100WE vs. GenBank_protein
Match: CAF2098438.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 499 bits (1284), Expect = 1.830e-174
Identity = 250/297 (84.18%), Postives = 259/297 (87.21%), Query Frame = 0
Query:  113 LTCGGEFNSRHIVRRSGPKALDDPKSSTRPQSG--EASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRA-----QGVGLWAPHSTRLETRTKESDMCASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSVLPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWARGSQF 402
            +  GGEFNSR IVRRSGPKALDDPKSSTRPQ    + SSATDRAQ PWKGAPERVR+PSCPDPVA RGAVYESGCLGMQPQSGGKFRPRLNMGERPIAN Y EH PHG    +       +G  +WA +STRLETRT ESDMCASQ V RGGCFVEPSHGIESSKWAIFGKQNWRCGMN+KPGYGAQL ANLEPTKGVGRLRQ D GHGSRNPLRSVLPTLETAQ EVGSSGWKSTAR +VSG FPAALEN EDRVPLTPGRTHNRIRSPRQGKSAKWI NFGKRIGSEGWARGSQF
Sbjct:    1 MQLGGEFNSRQIVRRSGPKALDDPKSSTRPQKRPQQTSSATDRAQAPWKGAPERVRSPSCPDPVAQRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANTYHEHTPHGGTSTMSFPVIYDRGCHMWALYSTRLETRTNESDMCASQWVRRGGCFVEPSHGIESSKWAIFGKQNWRCGMNQKPGYGAQLSANLEPTKGVGRLRQHDSGHGSRNPLRSVLPTLETAQSEVGSSGWKSTARCMVSGVFPAALENLEDRVPLTPGRTHNRIRSPRQGKSAKWICNFGKRIGSEGWARGSQF 297          
BLAST of Bnascaffold724T0000100WE vs. GenBank_protein
Match: CDY55729.1 (BnaC08g46150D [Brassica napus])

HSP 1 Score: 462 bits (1189), Expect = 1.970e-157
Identity = 257/402 (63.93%), Postives = 260/402 (64.68%), Query Frame = 0
Query:  102 SKMRYLDVRSVLTCGGEFNSRHIVRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRE-----------------------------HAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRV---------------------------------------------------------GRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV-----------------------------------------LPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR 376
            +K+R  D RSVLTCGGE  SR IV R GP  LDDPKSSTRPQSGEASSATDRAQVPWK APERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLN G+RPIANKYRE                             HAP GVPRHLRAQGVGLWAPHST LETRTKESDMCASQ V                                                         GRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV                                         LPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR
Sbjct:   66 AKIRAKDGRSVLTCGGELISRQIVGRFGPIGLDDPKSSTRPQSGEASSATDRAQVPWKRAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNRGDRPIANKYREGSGWGPAMRPGQMRNRAIRSADRFGAWTDHAPRGVPRHLRAQGVGLWAPHSTCLETRTKESDMCASQLVSKPVRRKEADWLDPSRCEHACRDPKDGELCLSGAKPEETLVEARSDTDVQIVRLTWVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSVARPIPGRRGKSQASMSRKARRSLQNLGREPGRSGRRCRSWCLPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR 467          
BLAST of Bnascaffold724T0000100WE vs. GenBank_protein
Match: CAF2043650.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 449 bits (1154), Expect = 5.730e-152
Identity = 255/445 (57.30%), Postives = 276/445 (62.02%), Query Frame = 0
Query:  108 DVRSVLTCGGEFNSRHIVRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRE-------------------------HAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVGRG-----GCFVEPSH---------------------------------------------------GIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDG----------------GHGSRNPLRSV-----------------------------------------LPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWARGSQFRTRRLLAGCLSC 414
            D RS+LTCGGEFNSRHIVRRS PKALDDP+SSTRPQSGEASSA  +AQVPWKGAPERVR+PSCP+P+APRG +YESGCLGMQPQS GKFRPRLN+GERPIANKY E                         HAPHGVPRHLRA+GVGLWAP+STRLETRTKESD+CASQRV +         ++PS                                                     IESSKWAIFGK+NW+C MNRKP Y AQLRANLEPTKGVGRLR+QDG                GHGS+NPLRSV                                         LPTLETAQPEVGSS WKSTA  VVSGAF  ALENP+D+V LT GRTHNRIR     +SAKWI NFGKRIGSEGWARGSQFRT RLLAGCLSC
Sbjct:   39 DARSILTCGGEFNSRHIVRRSCPKALDDPESSTRPQSGEASSAAGQAQVPWKGAPERVRSPSCPNPIAPRGTIYESGCLGMQPQSSGKFRPRLNVGERPIANKYHECLKLSGGKRMGAGDSSRSDAERSNPHAPHGVPRHLRAKGVGLWAPYSTRLETRTKESDICASQRVSKPVRRKEADLLDPSRCEHACRDPKDGEQCLSGAKPEETLVEARSDTDVQIVRLIWVGRVAALLSHPRIESSKWAIFGKRNWQCRMNRKPRYAAQLRANLEPTKGVGRLRRQDGFFSTKILSAREGYYNGGHGSQNPLRSVARHIPGRRGKSQASMSRRAQWLLQNLGREPKRSGHRCRSWCLPTLETAQPEVGSSIWKSTAHHVVSGAFRVALENPKDQVLLTRGRTHNRIR-----ESAKWIHNFGKRIGSEGWARGSQFRTHRLLAGCLSC 478          
BLAST of Bnascaffold724T0000100WE vs. GenBank_protein
Match: CDY66372.1 (BnaAnng22160D, partial [Brassica napus])

HSP 1 Score: 412 bits (1060), Expect = 9.690e-139
Identity = 232/355 (65.35%), Postives = 241/355 (67.89%), Query Frame = 0
Query:  102 SKMRYLDVRSVLTCGGEFNSRHIVRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRE-------------------------HAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRV---------------------------------------------------------GRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSVLPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRS 374
            +K+R  +VRSVLTCGGEFNSRHIVRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRE                         HAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRV                                                         GRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV      A+P  G  G KS A   +S     +L+N    +   PGR+  R RS
Sbjct:   66 AKIRAKNVRSVLTCGGEFNSRHIVRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRECLKLSGGKRMGAGDASWSDAERSNPHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVSKPVRRKEADWLDPSRCEHACRDPKDGERGRSGAKPEETLVEARSDTDVQIVRLTWVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV------ARPIPGRRG-KSQAS--MSRRARRSLQN----LGREPGRSGRRCRS 407          
BLAST of Bnascaffold724T0000100WE vs. GenBank_protein
Match: KAG2313788.1 (hypothetical protein Bca52824_016910 [Brassica carinata])

HSP 1 Score: 405 bits (1040), Expect = 1.380e-136
Identity = 204/256 (79.69%), Postives = 205/256 (80.08%), Query Frame = 0
Query:  109 VRSVLTCGGEFNSRHIVRRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQR------------------------------------------VGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV 322
             RS  TCGGEF  R+IV RSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMC S                                            VGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV
Sbjct:   95 ARSASTCGGEFKPRNIVGRSGPKALDDPKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCESTGFECEHACRDPKDGELCLSGAKPEETLVEARSDTDVQIVRLTWVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV 350          
BLAST of Bnascaffold724T0000100WE vs. GenBank_protein
Match: KAG5568993.1 (hypothetical protein H5410_064037 [Solanum commersonii])

HSP 1 Score: 423 bits (1087), Expect = 2.160e-136
Identity = 246/467 (52.68%), Postives = 254/467 (54.39%), Query Frame = 0
Query:  141 RPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRE-------------------------------------------------HAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQR--------------------------------------------------------VGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLR----------------------------------------------------------------------------------------SVLPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWARGSQFRTRRLLAGCLSC 414
            RPQSGEASS  DRAQVPWKGAPERVRAP CPDPVAPRGAVYESGCLGMQP+SGG+FRPRLN GERPIANKYRE                                                 HAP GVPRHLRA G GL  PHS RLETRTKESDMCASQR                                                        VGR GCFVEP HGI+SSKWAIFGKQNWRCGMNRKPGYGA+LRANL+PTKGVGRLRQQDGGHGSRNPLR                                                                                        + LPTLE+AQPEVGSSGWKSTARRVVSGA PAALENPEDR+P TPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWARGSQ RTRRL   C SC
Sbjct:  312 RPQSGEASSVADRAQVPWKGAPERVRAPLCPDPVAPRGAVYESGCLGMQPKSGGEFRPRLNTGERPIANKYREGKMKRTLKRESKTGPPIGSGCGPVRIGAAAKARALDTPVETPSRRLWWQHAPLGVPRHLRAPGTGLRVPHSARLETRTKESDMCASQRGSKPVRRKEADWRDPPCEHSCRDPKDGELCLSGAKPEETLVEARSDTDVQIVRLTWVGRRGCFVEPRHGIKSSKWAIFGKQNWRCGMNRKPGYGAKLRANLDPTKGVGRLRQQDGGHGSRNPLRIGGRGGRCKTLGASLGGAAVGADLGGSSKYSNENFEGRRGERFHVNGTCTWIARFARTPKGNRVKIPEPGRGVRRRRREPREELSFLFNSLPTLESAQPEVGSSGWKSTARRVVSGALPAALENPEDRMPSTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWARGSQSRTRRLSVDCSSC 778          
BLAST of Bnascaffold724T0000100WE vs. GenBank_protein
Match: CAF2086468.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 398 bits (1022), Expect = 4.200e-133
Identity = 226/374 (60.43%), Postives = 229/374 (61.23%), Query Frame = 0
Query:  136 PKSSTRPQSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYRE-----------------------------------HAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRV---------------------------------------------------------GRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGS----------------------------------RNPLRS-------VLPTLETAQPEVGSSGWKSTARRVVSGAFPAALENPEDRVPLTPGRTHNRIRSPR 376
            PK S R  SGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSG KFRPRLNMGERPIANKYRE                                   HA HGVPRHL+AQGVGLWAPHSTRLETRTKESDMCASQRV                                                         GRGGCFVEPSHGIESSKWAIFGKQNWRCGMN KPGYGAQLRANLEPTKGVGRLRQQDGGHG+                                  R P +S        LPTLETAQPEVGSSGWKSTARRVVSGAFP ALENPEDRVPLTPG THNRIRSPR
Sbjct:   28 PKPSGRGHSGEASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGSKFRPRLNMGERPIANKYREGSGWGPAMRPCRMRNGAIRSADRFGARRCLNRGLQHAAHGVPRHLQAQGVGLWAPHSTRLETRTKESDMCASQRVSKPVRRKEADWLDLSRFEHACRDPKDGELCLSGAKPEETLVEARRNTDVQIVRLTWVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNWKPGYGAQLRANLEPTKGVGRLRQQDGGHGTPKMDGAEARPYTRPRGKSQASMSRRARWSLQNLGREPGQSGRRCRSWCLPTLETAQPEVGSSGWKSTARRVVSGAFPVALENPEDRVPLTPGHTHNRIRSPR 401          
BLAST of Bnascaffold724T0000100WE vs. GenBank_protein
Match: CAF2098430.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 392 bits (1006), Expect = 9.060e-133
Identity = 189/217 (87.10%), Postives = 196/217 (90.32%), Query Frame = 0
Query:  111 SVLTCGGEFNSRHIVRRSGPKALDDPKSSTRPQSG-----EASSATDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRLNMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCASQRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV 322
            S+LTCGGEFNSRHIVRRS PKALDDPKSS RPQ       +A SATD+AQVPWKGAPERVRAPSCPDPVAPRGA+YE GCLGMQPQSGGKFRPRLNMGERPIANKYREH PHGVPRHL AQG+GLWAPHST LETRTKESDMCASQRVGRGGCFVEPSHGI SSKWAI GKQNWRCGMNRK GYGAQL ANLEPTKG+G LR QDGGHG RNPLR+V
Sbjct:   46 SILTCGGEFNSRHIVRRSSPKALDDPKSSMRPQVRRDHPLKAYSATDQAQVPWKGAPERVRAPSCPDPVAPRGAIYELGCLGMQPQSGGKFRPRLNMGERPIANKYREHVPHGVPRHLCAQGIGLWAPHSTCLETRTKESDMCASQRVGRGGCFVEPSHGIGSSKWAILGKQNWRCGMNRKLGYGAQLHANLEPTKGIGPLRPQDGGHGCRNPLRNV 262          
The following BLAST results are available for this feature:
BLAST of Bnascaffold724T0000100WE vs. GenBank_protein
Analysis Date: 2022-04-13 (Diamond on OGS1.0 vs NR)
Total hits: 20
Match NameE-valueIdentityDescription
CAF2043664.11.290e-20081.41unnamed protein product [Brassica napus][more]
CDY19789.14.740e-18585.48BnaA09g04420D [Brassica napus][more]
CAF2098438.11.830e-17484.18unnamed protein product [Brassica napus][more]
CDY55729.11.970e-15763.93BnaC08g46150D [Brassica napus][more]
CAF2043650.15.730e-15257.30unnamed protein product [Brassica napus][more]
CDY66372.19.690e-13965.35BnaAnng22160D, partial [Brassica napus][more]
KAG2313788.11.380e-13679.69hypothetical protein Bca52824_016910 [Brassica car... [more]
KAG5568993.12.160e-13652.68hypothetical protein H5410_064037 [Solanum commers... [more]
CAF2086468.14.200e-13360.43unnamed protein product [Brassica napus][more]
CAF2098430.19.060e-13387.10unnamed protein product [Brassica napus][more]

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InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-04-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 321..340
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..151
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 306..340
NoneNo IPR availablePANTHERPTHR33220BNAA09G04420D PROTEINcoord: 89..214
coord: 254..374
coord: 219..253
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..414
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold724contigscaffold724:10080..13245 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Interproscan on OGS1.02022-04-13 .72417
Diamond on OGS1.0 vs NR2022-04-13 .782894
Brassica napus Westar OGS1.02022-04-13 .642364
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Bnascaffold724T0000100WEBnascaffold724T0000100WEBrassica napus WestarmRNAscaffold724 10080..13245 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Bnascaffold724T0000100WE-P ID=Bnascaffold724T0000100WE-P|Name=Bnascaffold724T0000100WE|organism=Brassica napus Westar|type=polypeptide|length=415bp
MGGGAWPFLVGGAICLAGFLLCLLIPWLCVHPWPRLQFWLDRTHSFRISP
NPGTKSVKENATKQPAFANPETVFVRKQCCNVKSKTTLGNGYLGSRIDEE
RSKMRYLDVRSVLTCGGEFNSRHIVRRSGPKALDDPKSSTRPQSGEASSA
TDRAQVPWKGAPERVRAPSCPDPVAPRGAVYESGCLGMQPQSGGKFRPRL
NMGERPIANKYREHAPHGVPRHLRAQGVGLWAPHSTRLETRTKESDMCAS
QRVGRGGCFVEPSHGIESSKWAIFGKQNWRCGMNRKPGYGAQLRANLEPT
KGVGRLRQQDGGHGSRNPLRSVLPTLETAQPEVGSSGWKSTARRVVSGAF
PAALENPEDRVPLTPGRTHNRIRSPRQGKSAKWIRNFGKRIGSEGWARGS
QFRTRRLLAGCLSC.
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