Bnascaffold680T0000200WE-P (polypeptide) Brassica napus Westar

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Bnascaffold680T0000200WE
Unique Name	Bnascaffold680T0000200WE-P
Type	polypeptide
Organism	Brassica napus Westar (cv. Westar, rapeseed)
Sequence length	532

Homology

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BLAST of Bnascaffold680T0000200WE vs. GenBank_protein
Match: CAF2119192.1 (unnamed protein product [Brassica napus] >VDC78588.1 unnamed protein product [Brassica rapa])

HSP 1 Score: 878 bits (2268), Expect = 0.000e+0
Identity = 531/531 (100.00%), Postives = 531/531 (100.00%), Query Frame = 0

Query:    1 MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQGSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVQAKE 531
            MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQGSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVQAKE
Sbjct:    1 MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQGSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVQAKE 531

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BLAST of Bnascaffold680T0000200WE vs. GenBank_protein
Match: XP_013726485.1 (transcription factor GTE2-like [Brassica napus])

HSP 1 Score: 878 bits (2268), Expect = 0.000e+0
Identity = 531/531 (100.00%), Postives = 531/531 (100.00%), Query Frame = 0

Query:    1 MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQGSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVQAKE 531
            MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQGSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVQAKE
Sbjct:    1 MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQGSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVQAKE 531

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BLAST of Bnascaffold680T0000200WE vs. GenBank_protein
Match: RID68259.1 (hypothetical protein BRARA_C00430 [Brassica rapa])

HSP 1 Score: 877 bits (2265), Expect = 0.000e+0
Identity = 530/531 (99.81%), Postives = 531/531 (100.00%), Query Frame = 0

Query:    1 MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQGSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVQAKE 531
            MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQGSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFV+AKE
Sbjct:    1 MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQGSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVEAKE 531

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BLAST of Bnascaffold680T0000200WE vs. GenBank_protein
Match: XP_009131170.2 (transcription factor GTE2 [Brassica rapa])

HSP 1 Score: 872 bits (2254), Expect = 0.000e+0
Identity = 511/531 (96.23%), Postives = 512/531 (96.42%), Query Frame = 0

Query:    1 MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQGSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVQAKE 531
            MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQGSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRV    XXXXXXXXX         XXXXXX      ASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFV+AKE
Sbjct:    1 MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQGSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVPSPPXXXXXXXXXQPVSKVESPXXXXXXVNQVE-ASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVEAKE 530

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BLAST of Bnascaffold680T0000200WE vs. GenBank_protein
Match: KAG5403023.1 (hypothetical protein IGI04_009142 [Brassica rapa subsp. trilocularis])

HSP 1 Score: 870 bits (2247), Expect = 2.750e-315
Identity = 510/531 (96.05%), Postives = 511/531 (96.23%), Query Frame = 0

Query:    1 MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQGSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVQAKE 531
            MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQGSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRV    XXXXXXXXX         XXXXXX      ASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SVQSPFV+AKE
Sbjct:    1 MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQGSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVPSPPXXXXXXXXXQPVSKVESPXXXXXXVNQVE-ASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVQSPFVEAKE 530

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BLAST of Bnascaffold680T0000200WE vs. GenBank_protein
Match: XP_013680264.1 (transcription factor GTE2-like [Brassica napus])

HSP 1 Score: 868 bits (2243), Expect = 1.230e-314
Identity = 511/534 (95.69%), Postives = 511/534 (95.69%), Query Frame = 0

Query:    1 MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSW---VFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQGSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVQAKE 531
            MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSW   VFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQGSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRV    XXXXXXXXX         XXXXXX      ASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVQAKE
Sbjct:    1 MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQGSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVPSPPXXXXXXXXXQPVSKVESPXXXXXXVNQVE-ASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVQAKE 533

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BLAST of Bnascaffold680T0000200WE vs. GenBank_protein
Match: KAF3505731.1 (hypothetical protein F2Q69_00000423 [Brassica cretica])

HSP 1 Score: 831 bits (2147), Expect = 5.030e-300
Identity = 508/535 (94.95%), Postives = 516/535 (96.45%), Query Frame = 0

Query:    1 MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQ----GSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVQAKE 531
            MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSS+QFRDGGDYVSFDLDSY+S QLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVA KTT      + SHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWF+PTLKKFEAQQQ    GSSSR P+VSELNQRLSENARKGPE+ISIAKKLDSLKPLPTLPPPVMELPRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     ASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQ+LPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFV+AKE
Sbjct:    1 MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSNQFRDGGDYVSFDLDSYTSIQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVAKKTTTXXXXKT-SHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFTPTLKKFEAQQQAQQQGSSSRLPLVSELNQRLSENARKGPERISIAKKLDSLKPLPTLPPPVMELPRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNQVEASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQDLPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVEAKE 534

[Close]

BLAST of Bnascaffold680T0000200WE vs. GenBank_protein
Match: KAG2334340.1 (hypothetical protein Bca52824_005520 [Brassica carinata])

HSP 1 Score: 830 bits (2144), Expect = 1.440e-299
Identity = 499/535 (93.27%), Postives = 507/535 (94.77%), Query Frame = 0

Query:    1 MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQ----GSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVQAKE 531
            MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSS+QFRDGGDYVSFDLDSY+S QLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVA KTT      + SHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTN+EKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQ    GSSSR P+VSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRV  XXXXXXXXXXX         XXXXXXXXXX  + +EVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFV+AKE
Sbjct:    1 MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSNQFRDGGDYVSFDLDSYTSIQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVAKKTTTXXXXKT-SHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNIEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQAQQQGSSSRLPLVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVPSXXXXXXXXXXXQPVSKVESPXXXXXXXXXXEASPLEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVEAKE 534

[Close]

BLAST of Bnascaffold680T0000200WE vs. GenBank_protein
Match: CAF1696963.1 (unnamed protein product [Brassica napus] >VDC85831.1 unnamed protein product [Brassica oleracea])

HSP 1 Score: 826 bits (2133), Expect = 7.330e-298
Identity = 500/537 (93.11%), Postives = 507/537 (94.41%), Query Frame = 0

Query:    1 MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEI--GVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQ----GSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVQAKE 531
            MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSS+QFRDGGDYVSFDLDSY+S QLRELKKRLNLELEQVRFLRERIESGAFTTPAHEI  GVA KTT      + SHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQ    GSSSR P+VSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRV  XXXXXXXXXXX         XXXXXXXXXX  + +EVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFV+AKE
Sbjct:    1 MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSNQFRDGGDYVSFDLDSYTSIQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIEIGVAKKTTTXXXXKT-SHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQAQQQGSSSRLPLVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVPSXXXXXXXXXXXQPVSKVESPXXXXXXXXXXEASPLEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVEAKE 536

[Close]

BLAST of Bnascaffold680T0000200WE vs. GenBank_protein
Match: XP_013628578.1 (PREDICTED: transcription factor GTE2-like [Brassica oleracea var. oleracea])

HSP 1 Score: 825 bits (2132), Expect = 8.020e-298
Identity = 494/535 (92.34%), Postives = 502/535 (93.83%), Query Frame = 0

Query:    1 MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGDYVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVANKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQ----GSSSRPPVVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVQAKE 531
            MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSS+QFRDGGDYVSFDLDSY+S QLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVA KTT      + SHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWF+PTLKKFEAQQQ    GSSSR P+VSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRV     XXXXXX   XXXXXXXXXX          + +EVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFV+AKE
Sbjct:    1 MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSNQFRDGGDYVSFDLDSYTSIQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVAKKTTTXXXXKT-SHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNTPVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTNALAYNPKGQDVYKMAEKLLSQFDVWFTPTLKKFEAQQQAQQQGSSSRLPLVSELNQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVPSPPPXXXXXXVVSXXXXXXXXXXNQVEA-----SPLEVGEAPKGRKGKLPKPKAKDPNKREMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEELDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEKRVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSVQSPFVEAKE 529

The following BLAST results are available for this feature:

BLAST of Bnascaffold680T0000200WE vs. GenBank_protein

BLAST of Bnascaffold680T0000200WE vs. GenBank_protein
Analysis Date: 2022-04-13 (Diamond on OGS1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
CAF2119192.1	0.000e+0	100.00	unnamed protein product [Brassica napus] >VDC78588...	[more]
XP_013726485.1	0.000e+0	100.00	transcription factor GTE2-like [Brassica napus]	[more]
RID68259.1	0.000e+0	99.81	hypothetical protein BRARA_C00430 [Brassica rapa]	[more]
XP_009131170.2	0.000e+0	96.23	transcription factor GTE2 [Brassica rapa]	[more]
KAG5403023.1	2.750e-315	96.05	hypothetical protein IGI04_009142 [Brassica rapa s...	[more]
XP_013680264.1	1.230e-314	95.69	transcription factor GTE2-like [Brassica napus]	[more]
KAF3505731.1	5.030e-300	94.95	hypothetical protein F2Q69_00000423 [Brassica cret...	[more]
KAG2334340.1	1.440e-299	93.27	hypothetical protein Bca52824_005520 [Brassica car...	[more]
CAF1696963.1	7.330e-298	93.11	unnamed protein product [Brassica napus] >VDC85831...	[more]
XP_013628578.1	8.020e-298	92.34	PREDICTED: transcription factor GTE2-like [Brassic...	[more]

Pages

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-04-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 64..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 431..531
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..320
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 485..531
None	No IPR available	PANTHER	PTHR45926:SF14	TRANSCRIPTION FACTOR GTE2	coord: 18..528
None	No IPR available	PANTHER	PTHR45926	OSJNBA0053K19.4 PROTEIN	coord: 18..528
IPR001487	Bromodomain	PRINTS	PR00503	BROMODOMAIN	coord: 159..175 score: 49.1 coord: 175..193 score: 29.41 coord: 193..212 score: 44.35 coord: 143..156 score: 32.76
IPR001487	Bromodomain	SMART	SM00297	bromo_6	coord: 121..231 e-value: 2.5E-29 score: 113.5
IPR001487	Bromodomain	PFAM	PF00439	Bromodomain	coord: 132..217 e-value: 4.9E-19 score: 68.2
IPR001487	Bromodomain	PROSITE	PS50014	BROMODOMAIN_2	coord: 140..212 score: 17.798
IPR038336	NET domain superfamily	GENE3D	1.20.1270.220		coord: 346..423 e-value: 6.9E-24 score: 85.7
IPR027353	NET domain	PFAM	PF17035	BET	coord: 352..414 e-value: 1.9E-22 score: 79.2
IPR027353	NET domain	PROSITE	PS51525	NET	coord: 343..424 score: 21.454088
IPR036427	Bromodomain-like superfamily	GENE3D	1.20.920.10		coord: 90..243 e-value: 8.7E-36 score: 124.8
IPR036427	Bromodomain-like superfamily	SUPERFAMILY	47370	Bromodomain	coord: 123..231
IPR037377	Putative transcription factor GTE, bromodomain	CDD	cd05506	Bromo_plant1	coord: 128..226 e-value: 1.03486E-59 score: 190.619

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold680	contig	scaffold680:8787..10563 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Interproscan on OGS1.0	2022-04-13 .72417
Blast2go on OGS1.0	2022-04-13 .735315
Diamond on OGS1.0 vs NR	2022-04-13 .782894
Brassica napus Westar OGS1.0	2022-04-13 .642364

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Bnascaffold680T0000200WE	Bnascaffold680T0000200WE	Brassica napus Westar	mRNA	scaffold680 8612..10819 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Bnascaffold680T0000200WE-P ID=Bnascaffold680T0000200WE-P|Name=Bnascaffold680T0000200WE|organism=Brassica napus Westar|type=polypeptide|length=532bp
MAPAVLANLNEPLFQRRQCDAVFMRKHTNHPDDFTNPNPNSSSQFRDGGD
YVSFDLDSYSSNQLRELKKRLNLELEQVRFLRERIESGAFTTPAHEIGVA
NKTTKKKKKTSHSHGRLDLESEKALRSTMSTCGQILAKLMKHKWSWVFNT
PVDVLGLGLHDYHLIVKKPMDLGTVKTNLEKGFYRSPVDFASDVRLTFTN
ALAYNPKGQDVYKMAEKLLSQFDVWFSPTLKKFEAQQQGSSSRPPVVSEL
NQRLSENARKGPEQISIAKKLDSLKPLPTLPPPVMELPRVPSPPPSPVQP
PPPPQPVSKVESPPQPPQPVNQVEASVEVGEAPKGRKGKLPKPKAKDPNK
REMTMEEKAKLGVNLQELPPEKLGQLIQILKKRTTNLPQDGDEIELDIEE
LDNETLWELDRFVTNYKKMASKIKRQGFIQNLSTPTRNMPPVMEMGSAEK
RVRKGGDGGEEDVDIGEDIPIEDYPSVEIERDGTAATAGSSSSGSSSSSG
GSSSSDSESGSSSGSDSDADSVQSPFVQAKE.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR037377	GTE_bromo
IPR036427	Bromodomain-like_sf
IPR027353	NET_dom
IPR038336	NET_sf
IPR001487	Bromodomain

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Orthology

View orthology data for Bnascaffold680T0000200WE-P