C09p75770.1_BnaDARv10-PA (polypeptide) Brassica napus

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameC09p75770.1_BnaDARv10-RA
Unique NameC09p75770.1_BnaDARv10-PA
Typepolypeptide
OrganismBrassica napus (cv. Darmor-bzh, rapeseed)
Sequence length437
Homology
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BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Match: CDY43229.1 (BnaC05g48220D [Brassica napus] >VDD47529.1 unnamed protein product [Brassica oleracea])

HSP 1 Score: 877 bits (2265), Expect = 0.000e+0
Identity = 436/436 (100.00%), Postives = 436/436 (100.00%), Query Frame = 0 
Query:    1 MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 436
            MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP
Sbjct:    1 MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 436
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BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Match: KAF2548143.1 (hypothetical protein F2Q70_00024106 [Brassica cretica])

HSP 1 Score: 869 bits (2245), Expect = 0.000e+0
Identity = 432/436 (99.08%), Postives = 434/436 (99.54%), Query Frame = 0 
Query:    1 MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 436
            MEIATVVKANGG EADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLE+DDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVR IFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADE+SMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP
Sbjct:    1 MEIATVVKANGGCEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEEDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRIIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEVSMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 436
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BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013587530.1 (PREDICTED: mannose-6-phosphate isomerase 1 [Brassica oleracea var. oleracea])

HSP 1 Score: 865 bits (2236), Expect = 0.000e+0
Identity = 433/436 (99.31%), Postives = 434/436 (99.54%), Query Frame = 0 
Query:    1 MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 436
            MEIATVVKANGG EADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTH+SGPSYLEDD ADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP
Sbjct:    1 MEIATVVKANGGCEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHQSGPSYLEDD-ADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 435
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BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_009147339.1 (mannose-6-phosphate isomerase 1 [Brassica rapa] >RID64651.1 hypothetical protein BRARA_E03572 [Brassica rapa] >VDC73421.1 unnamed protein product [Brassica rapa])

HSP 1 Score: 862 bits (2228), Expect = 1.210e-315
Identity = 432/436 (99.08%), Postives = 432/436 (99.08%), Query Frame = 0 
Query:    1 MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 436
            MEIATVVKANGG EADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGG   VTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP
Sbjct:    1 MEIATVVKANGGCEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGG---VTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 433
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BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013661461.1 (mannose-6-phosphate isomerase 1 isoform X2 [Brassica napus] >XP_022568654.1 mannose-6-phosphate isomerase 1 isoform X1 [Brassica napus] >CDY57541.1 BnaA05g33470D [Brassica napus])

HSP 1 Score: 861 bits (2224), Expect = 3.640e-315
Identity = 431/436 (98.85%), Postives = 432/436 (99.08%), Query Frame = 0 
Query:    1 MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 436
            MEIATVVKANGG EADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGG   VTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHL+SSSDLKLYRAGINSRFLDSP
Sbjct:    1 MEIATVVKANGGCEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGG---VTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLESSSDLKLYRAGINSRFLDSP 433
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BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_018493260.1 (PREDICTED: mannose-6-phosphate isomerase 1 [Raphanus sativus])

HSP 1 Score: 838 bits (2165), Expect = 3.250e-306
Identity = 420/436 (96.33%), Postives = 427/436 (97.94%), Query Frame = 0 
Query:    1 MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 436
            MEIATV+KANGG EADRRR LRRLRCSVKDYAWGKIGSDSLVYRV+AANSD+ ID+TRPYAELWMGTHESGPSYLEDDD   GSDGVTLRSWIAENPE+LGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDK LAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRA+PEIEELVGSEE NQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLT+KERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLT KPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP
Sbjct:    1 MEIATVLKANGGCEADRRR-LRRLRCSVKDYAWGKIGSDSLVYRVHAANSDREIDATRPYAELWMGTHESGPSYLEDDD---GSDGVTLRSWIAENPESLGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKNLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAVPEIEELVGSEEVNQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTEKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTPKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 432
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BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Match: CAA7038563.1 (unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 810 bits (2092), Expect = 4.330e-295
Identity = 408/435 (93.79%), Postives = 418/435 (96.09%), Query Frame = 0 
Query:    1 MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDS 435
            MEIATVVKANGG EADRR  LRRL+CSVKDY WGKIGSDSLVYRVYAANSD  IDSTRPYAELWMGTHESGPSYLED D   GS+GVTLRSWIAENP++LGDRVLEKWGCDLPFLFKVLSV R LSIQ+HPDK LAKK+HKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVG+EEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIV KLK RLHMESQER LTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGEC+EVMATSDNVVRAGLT+KPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAG+NSRFL S
Sbjct:    1 MEIATVVKANGGCEADRRW-LRRLKCSVKDYDWGKIGSDSLVYRVYAANSDDQIDSTRPYAELWMGTHESGPSYLEDAD---GSNGVTLRSWIAENPKSLGDRVLEKWGCDLPFLFKVLSVARPLSIQAHPDKNLAKKMHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGNEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVFKLKRRLHMESQERQLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECLEVMATSDNVVRAGLTNKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGVNSRFLYS 431
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BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Match: CDY54299.1 (BnaC01g41980D [Brassica napus])

HSP 1 Score: 807 bits (2085), Expect = 4.340e-294
Identity = 404/418 (96.65%), Postives = 407/418 (97.37%), Query Frame = 0 
Query:   18 RRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDS 435
            RRRL RLRCSVKDYAWGKIGSDSLVYRVYA NSD  IDSTRPYAELWMGTHESGPSYLEDD     +DGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEI LKSSSDLKLYRAG+N+RFL S
Sbjct:   15 RRRLHRLRCSVKDYAWGKIGSDSLVYRVYAVNSDGQIDSTRPYAELWMGTHESGPSYLEDD-----ADGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIQLKSSSDLKLYRAGVNNRFLYS 427
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BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_006408404.1 (mannose-6-phosphate isomerase 1 [Eutrema salsugineum] >ESQ49857.1 hypothetical protein EUTSA_v10020776mg [Eutrema salsugineum])

HSP 1 Score: 804 bits (2076), Expect = 1.190e-292
Identity = 405/436 (92.89%), Postives = 416/436 (95.41%), Query Frame = 0 
Query:    1 MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP 436
            MEIATVVKANGG EADRRR LRRL+CSVKDY WGKIGSDSLVYRVYAANSD  IDSTRPYAELWMGTHESGPSYL D D   GS+G+TLRSWI ENP++LG+RVLEKWGCDLPFLFKVLSV R LSIQ+HPDK LAKK+HKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIV KLK RLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVL GEGR+STDASADEISMGDVLFVPADTEI LKSS DLKLYRAG+N+RFL SP
Sbjct:    1 MEIATVVKANGGCEADRRR-LRRLKCSVKDYDWGKIGSDSLVYRVYAANSDYQIDSTRPYAELWMGTHESGPSYLADAD---GSNGMTLRSWITENPKSLGNRVLEKWGCDLPFLFKVLSVARPLSIQAHPDKNLAKKMHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVFKLKRRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLLGEGRVSTDASADEISMGDVLFVPADTEIQLKSSFDLKLYRAGVNNRFLYSP 432
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BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_010463670.1 (PREDICTED: mannose-6-phosphate isomerase 1 [Camelina sativa])

HSP 1 Score: 794 bits (2050), Expect = 1.090e-288
Identity = 401/435 (92.18%), Postives = 414/435 (95.17%), Query Frame = 0 
Query:    1 MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANSDQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEALGDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDKERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRYLPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEISMGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDS 435
            MEI TVVKANGG EADRRR LRRLRCSVKDY WGKIGSDSLVYRVYAANSD  ID TRPYAELWMGTHESGPSYLED D   GS+GVTLRSWIAENP++LG+RVLEKWGCDLPFLFKVLSV RALSIQ+HPDK LAKK+HKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKS VRTIFTLLMSA PDTTK+IV KLK RLHMESQER LTDKERLVLKLEKQYP+DIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQ+LCSMLSYKLG+PEILKGSRIRPYITRYLPPFEEFEVDLCDLP GASTVFPSVPGPSLLLVLQGEGRMST+ASAD ISMGDVLFVPADTEIHL+SSSDLKLYRAG+NSRFL S
Sbjct:    1 MEIVTVVKANGGCEADRRR-LRRLRCSVKDYDWGKIGSDSLVYRVYAANSDVQIDPTRPYAELWMGTHESGPSYLEDAD---GSNGVTLRSWIAENPKSLGNRVLEKWGCDLPFLFKVLSVARALSIQAHPDKKLAKKMHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCISEHDEEKVKSVVRTIFTLLMSADPDTTKKIVFKLKRRLHMESQERQLTDKERLVLKLEKQYPNDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECIEVMATSDNVVRAGLTSKPLDIQSLCSMLSYKLGYPEILKGSRIRPYITRYLPPFEEFEVDLCDLPSGASTVFPSVPGPSLLLVLQGEGRMSTEASADGISMGDVLFVPADTEIHLRSSSDLKLYRAGVNSRFLYS 431
The following BLAST results are available for this feature:
BLAST of C09p75770.1_BnaDARv10-RA vs. GenBank_protein
Analysis Date: 2021-04-17 (Diamond on Darmor-bzh OGS10 v10 vs NR)
Total hits: 20
Match NameE-valueIdentityDescription
CDY43229.10.000e+0100.00BnaC05g48220D [Brassica napus] >VDD47529.1 unnamed... [more]
KAF2548143.10.000e+099.08hypothetical protein F2Q70_00024106 [Brassica cret... [more]
XP_013587530.10.000e+099.31PREDICTED: mannose-6-phosphate isomerase 1 [Brassi... [more]
XP_009147339.11.210e-31599.08mannose-6-phosphate isomerase 1 [Brassica rapa] >R... [more]
XP_013661461.13.640e-31598.85mannose-6-phosphate isomerase 1 isoform X2 [Brassi... [more]
XP_018493260.13.250e-30696.33PREDICTED: mannose-6-phosphate isomerase 1 [Raphan... [more]
CAA7038563.14.330e-29593.79unnamed protein product [Microthlaspi erraticum][more]
CDY54299.14.340e-29496.65BnaC01g41980D [Brassica napus][more]
XP_006408404.11.190e-29292.89mannose-6-phosphate isomerase 1 [Eutrema salsugine... [more]
XP_010463670.11.090e-28892.18PREDICTED: mannose-6-phosphate isomerase 1 [Cameli... [more]

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GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0000032 cell wall mannoprotein biosynthetic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009298 GDP-mannose biosynthetic process
biological_process GO:0006486 protein glycosylation
biological_process GO:0046686 response to cadmium ion
biological_process GO:0032025 response to cobalt ion
biological_process GO:0033591 response to L-ascorbic acid
biological_process GO:0009416 response to light stimulus
biological_process GO:0010043 response to zinc ion
cellular_component GO:0005829 cytosol
molecular_function GO:0004476 mannose-6-phosphate isomerase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterProScan on Darmor-bzh OGS10 v10
Date Performed: 2021-04-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 240..260
NoneNo IPR availableGENE3D1.10.441.10Phosphomannose Isomerase, domain 2coord: 171..336
e-value: 6.0E-132
score: 442.7
NoneNo IPR availablePIRSRPIRSR001480-1PIRSR001480-1coord: 29..427
e-value: 7.4E-126
score: 418.4
NoneNo IPR availablePIRSRPIRSR001480-2PIRSR001480-2coord: 29..427
e-value: 7.4E-126
score: 418.4
NoneNo IPR availablePANTHERPTHR10309:SF9MANNOSE-6-PHOSPHATE ISOMERASE 1coord: 5..434
NoneNo IPR availableCDDcd07011cupin_PMI_type_I_Ncoord: 26..330
e-value: 6.51588E-121
score: 350.311
IPR016305Mannose-6-phosphate isomerasePRINTSPR00714MAN6PISMRASEcoord: 59..74
score: 69.38
coord: 24..42
score: 48.95
coord: 257..272
score: 43.12
coord: 147..170
score: 65.42
coord: 273..292
score: 54.5
coord: 112..133
score: 70.45
coord: 292..311
score: 66.5
coord: 311..330
score: 51.5
IPR016305Mannose-6-phosphate isomerasePIRSFPIRSF001480PMIcoord: 18..433
e-value: 1.7E-128
score: 427.4
IPR016305Mannose-6-phosphate isomerasePANTHERPTHR10309MANNOSE-6-PHOSPHATE ISOMERASEcoord: 5..434
IPR001250Mannose-6-phosphate isomerase, type IPFAMPF01238PMI_typeIcoord: 22..392
e-value: 8.6E-106
score: 354.3
IPR001250Mannose-6-phosphate isomerase, type ITIGRFAMTIGR00218TIGR00218coord: 21..418
e-value: 7.5E-74
score: 247.0
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10Jelly Rollscoord: 25..312
e-value: 6.0E-132
score: 442.7
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10Jelly Rollscoord: 23..426
e-value: 6.0E-132
score: 442.7
IPR018050Phosphomannose isomerase, type I, conserved sitePROSITEPS00965PMI_I_1coord: 147..155
IPR011051RmlC-like cupin domain superfamilySUPERFAMILY51182RmlC-like cupinscoord: 20..429

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C09_BnaDARv10contigC09_BnaDARv10:66109626..66111666 +    View in Apollo
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on Darmor-bzh OGS10 v102021-04-17
Diamond on Darmor-bzh OGS10 v10 vs NR2021-04-17
Blast2GO on Darmor-bzh OGS10 v102021-04-17
Darmor-bzh OGS10 v102020-07-22
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
C09p75770.1_BnaDARv10-RAC09p75770.1_BnaDARv10-RABrassica napusmRNAC09_BnaDARv10 66109556..66111666 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>C09p75770.1_BnaDARv10-PA ID=C09p75770.1_BnaDARv10-PA|Name=C09p75770.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=437bp
MEIATVVKANGGYEADRRRRLRRLRCSVKDYAWGKIGSDSLVYRVYAANS
DQPIDSTRPYAELWMGTHESGPSYLEDDDADGGSDGVTLRSWIAENPEAL
GDRVLEKWGCDLPFLFKVLSVGRALSIQSHPDKVLAKKLHKAHPNLYKDD
NHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCI
SEHDEEKVKSAVRTIFTLLMSAGPDTTKQIVSKLKHRLHMESQERHLTDK
ERLVLKLEKQYPDDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECI
EVMATSDNVVRAGLTSKPLDIQTLCSMLSYKLGFPEILKGSRIRPYITRY
LPPFEEFEVDLCDLPCGASTVFPSVPGPSLLLVLQGEGRMSTDASADEIS
MGDVLFVPADTEIHLKSSSDLKLYRAGINSRFLDSP.
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011051RmlC_Cupin_sf
IPR018050Pmannose_isomerase-type1_CS
IPR014710RmlC-like_jellyroll
IPR001250Man6P_Isoase-1
IPR016305Mannose-6-P_Isomerase
Vocabulary: Biological Process
TermDefinition
GO:0046686response to cadmium ion
GO:0033591response to L-ascorbic acid
GO:0032025response to cobalt ion
GO:0010043response to zinc ion
GO:0009793embryo development ending in seed dormancy
GO:0009416response to light stimulus
GO:0009298GDP-mannose biosynthetic process
GO:0006486protein glycosylation
GO:0005975carbohydrate metabolic process
GO:0000032cell wall mannoprotein biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0004476mannose-6-phosphate isomerase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol