C09p65760.1_BnaDARv10-PA (polypeptide) Brassica napus

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	C09p65760.1_BnaDARv10-RA
Unique Name	C09p65760.1_BnaDARv10-PA
Type	polypeptide
Organism	Brassica napus (cv. Darmor-bzh, rapeseed)
Sequence length	227

Homology

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BLAST of C09p65760.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013712644.1 (uncharacterized serine-rich protein C215.13-like [Brassica napus] >VDD34075.1 unnamed protein product [Brassica oleracea])

HSP 1 Score: 373 bits (957), Expect = 4.240e-129
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0

Query:    1 MQRKTMVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSSXXXXXXXXXXXXXXXXXXXXXXXXXXHHRSASPTRVNLYNPQPMMAQSFRYSLDSRSISPTNRSISVTKKPQPSSXXXXXKISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGAASSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATECN 226
            MQRKTMVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSSXXXXXXXXXXXXXXXXXXXXXXXXXXHHRSASPTRVNLYNPQPMMAQSFRYSLDSRSISPTNRSISVTKKPQPSSXXXXXKISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGAASSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATECN
Sbjct:    1 MQRKTMVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSSXXXXXXXXXXXXXXXXXXXXXXXXXXHHRSASPTRVNLYNPQPMMAQSFRYSLDSRSISPTNRSISVTKKPQPSSXXXXXKISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGAASSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATECN 226

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BLAST of C09p65760.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013606071.1 (PREDICTED: putative protein TPRXL [Brassica oleracea var. oleracea])

HSP 1 Score: 367 bits (943), Expect = 5.550e-127
Identity = 221/226 (97.79%), Postives = 222/226 (98.23%), Query Frame = 0

Query:    1 MQRKTMVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSSXXXXXXXXXXXXXXXXXXXXXXXXXXHHRSASPTRVNLYNPQPMMAQSFRYSLDSRSISPTNRSISVTKKPQPSSXXXXXKISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGAASSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATECN 226
            MQRKTMVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSSXXXXXXXXXXXXXXXXXXXXXXXXXXHHRSASPTRVNLYNPQPMMAQSFRYSLDSRSISPTNRSISVTKKPQPSS  X  KISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGA+SSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATECN
Sbjct:    1 MQRKTMVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSSXXXXXXXXXXXXXXXXXXXXXXXXXXHHRSASPTRVNLYNPQPMMAQSFRYSLDSRSISPTNRSISVTKKPQPSSHHXH-KISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGASSSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATECN 225

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BLAST of C09p65760.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_022549338.1 (putative protein TPRXL [Brassica napus])

HSP 1 Score: 357 bits (916), Expect = 6.480e-123
Identity = 212/226 (93.81%), Postives = 216/226 (95.58%), Query Frame = 0

Query:    1 MQRKTMVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSSXXXXXXXXXXXXXXXXXXXXXXXXXXHHRSASPTRVNLYNPQPMMAQSFRYSLDSRSISPTNRSISVTKKPQPSSXXXXXKISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGAASSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATECN 226
            MQRKTMVTTSSRTKSNGHVLRSQSP+GRFCGDYSKSTPSS     XXXXXXXXXXXXXXXXX    HHRSASPTRVNLYNPQP+ AQSFRYSLDSRSISPTNRSISVTKKPQPSSXXXXXKISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGA+SS+YPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATECN
Sbjct:    1 MQRKTMVTTSSRTKSNGHVLRSQSPAGRFCGDYSKSTPSSSSSTFXXXXXXXXXXXXXXXXXN---HHRSASPTRVNLYNPQPI-AQSFRYSLDSRSISPTNRSISVTKKPQPSSXXXXXKISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGASSSAYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATECN 222

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BLAST of C09p65760.1_BnaDARv10-RA vs. GenBank_protein
Match: KAF3563212.1 (hypothetical protein DY000_02019280 [Brassica cretica])

HSP 1 Score: 356 bits (913), Expect = 1.550e-122
Identity = 207/221 (93.67%), Postives = 207/221 (93.67%), Query Frame = 0

Query:    6 MVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSSXXXXXXXXXXXXXXXXXXXXXXXXXXHHRSASPTRVNLYNPQPMMAQSFRYSLDSRSISPTNRSISVTKKPQPSSXXXXXKISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGAASSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATECN 226
            MVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSS      XXXXXXXXXXXXXXXX    HHRSASPTRVNLYNPQPMMAQSFRYSLDSRSISPTNRSISVTKKPQPSS  X  KISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGAASSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATECN
Sbjct:    1 MVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSSSSSAFAXXXXXXXXXXXXXXXXN---HHRSASPTRVNLYNPQPMMAQSFRYSLDSRSISPTNRSISVTKKPQPSSHHXH-KISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGAASSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATECN 217

[Close]

BLAST of C09p65760.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_009121994.1 (putative protein TPRXL [Brassica rapa])

HSP 1 Score: 352 bits (902), Expect = 9.430e-121
Identity = 213/228 (93.42%), Postives = 215/228 (94.30%), Query Frame = 0

Query:    1 MQRKTMVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSSXXXXXXXXXXXXXXXXXXXXXXXXXXHHRSASPTRVNLYNPQPMMAQSFRYSLDSRSISPTNRSISVTKKPQPSSXXXXX--KISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGAASSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATECN 226
            MQRKTMVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSS     XXXXXXXXXXXXXXXXX    HHRSASPTRVNLYNPQP+ AQSFRYSLDSRSISPTNRSISVTKKPQPSSXXXXX  KISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGA+SSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLS MSKATECN
Sbjct:    1 MQRKTMVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSSSSSTFXXXXXXXXXXXXXXXXXN---HHRSASPTRVNLYNPQPI-AQSFRYSLDSRSISPTNRSISVTKKPQPSSXXXXXXXKISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGASSSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSNMSKATECN 224

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BLAST of C09p65760.1_BnaDARv10-RA vs. GenBank_protein
Match: RID42370.1 (hypothetical protein BRARA_J02258 [Brassica rapa])

HSP 1 Score: 351 bits (901), Expect = 1.200e-120
Identity = 209/226 (92.48%), Postives = 212/226 (93.81%), Query Frame = 0

Query:    1 MQRKTMVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSSXXXXXXXXXXXXXXXXXXXXXXXXXXHHRSASPTRVNLYNPQPMMAQSFRYSLDSRSISPTNRSISVTKKPQPSSXXXXXKISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGAASSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATECN 226
            MQRKTMVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSS     XXXXXXXXXXXXXXXXX    HHRSASPTRVNLYNPQP+ AQSFRYSLDSRSISPTNRSISVTKKPQPSS  XX KISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGA+SS+YPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLS MSKATECN
Sbjct:    1 MQRKTMVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSSSSSTFXXXXXXXXXXXXXXXXXN---HHRSASPTRVNLYNPQPI-AQSFRYSLDSRSISPTNRSISVTKKPQPSSHHXX-KISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGASSSAYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSNMSKATECN 221

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BLAST of C09p65760.1_BnaDARv10-RA vs. GenBank_protein
Match: VDD20103.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 350 bits (897), Expect = 4.250e-120
Identity = 208/221 (94.12%), Postives = 211/221 (95.48%), Query Frame = 0

Query:    6 MVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSSXXXXXXXXXXXXXXXXXXXXXXXXXXHHRSASPTRVNLYNPQPMMAQSFRYSLDSRSISPTNRSISVTKKPQPSSXXXXXKISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGAASSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATECN 226
            MVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSS     XXXXXXXXXXXXXXXXX    HHRSASPTRVNLYNPQP+ AQSFRYSLDSRSISPTNRSISVTKKPQPSSXXXXXKISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGA+SS+YPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATECN
Sbjct:    1 MVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSSSSSTFXXXXXXXXXXXXXXXXXN---HHRSASPTRVNLYNPQPI-AQSFRYSLDSRSISPTNRSISVTKKPQPSSXXXXXKISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGASSSAYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATECN 217

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BLAST of C09p65760.1_BnaDARv10-RA vs. GenBank_protein
Match: KAF3503085.1 (hypothetical protein F2Q69_00045048 [Brassica cretica])

HSP 1 Score: 345 bits (885), Expect = 1.270e-112
Identity = 216/220 (98.18%), Postives = 216/220 (98.18%), Query Frame = 0

Query:    6 MVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSSXXXXXXXXXXXXXXXXXXXXXXXXXXHHRSASPTRVNLYNPQPMMAQSFRYSLDSRSISPTNRSISVTKKPQPSSXXXXX-KISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGAASSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATE 224
            MVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPS XXXXXXXXXXXXXXXXXXXXXXXXXX  RSASPTRVNLYNPQPMMAQSFRYSLDSRSISPTNRSISVTKKPQPSSXXXXX KISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGAASSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATE
Sbjct:    1 MVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSASPTRVNLYNPQPMMAQSFRYSLDSRSISPTNRSISVTKKPQPSSXXXXXXKISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGAASSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATE 220

[Close]

BLAST of C09p65760.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_018442157.1 (PREDICTED: putative protein TPRXL [Raphanus sativus] >XP_018442158.1 PREDICTED: putative protein TPRXL [Raphanus sativus])

HSP 1 Score: 323 bits (829), Expect = 1.150e-109
Identity = 205/227 (90.31%), Postives = 210/227 (92.51%), Query Frame = 0

Query:    1 MQRKTMVTTSSRTKSNGHVLRSQSPSGRFCGDYSKS-TPSSXXXXXXXXXXXXXXXXXXXXXXXXXXHHRSASPTRVNLYNPQPMMAQSFRYSLDSRSISPTNRSISVTKKPQPSSXXXXXKISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGAASSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATECN 226
            MQRKTMVTTSSRTKS GHVLRSQSPSGRFC DYS++ TPS XXXXXXXXXXXXXXXXXXXXXXXXXX  RSASPTRVNLYNPQP+ AQSFRYSLDSRSISPTNRSISVTKKPQPS        SSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGAAS SYP +SLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHL+RRAAYQPRPSRLSIMSKATECN
Sbjct:    1 MQRKTMVTTSSRTKSTGHVLRSQSPSGRFCSDYSRAATPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSASPTRVNLYNPQPI-AQSFRYSLDSRSISPTNRSISVTKKPQPSKIS---SSSSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGAAS-SYPASSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLKRRAAYQPRPSRLSIMSKATECN 222

[Close]

BLAST of C09p65760.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_006399610.1 (putative protein TPRXL [Eutrema salsugineum] >ESQ41063.1 hypothetical protein EUTSA_v10014629mg [Eutrema salsugineum])

HSP 1 Score: 303 bits (776), Expect = 1.200e-101
Identity = 188/225 (83.56%), Postives = 193/225 (85.78%), Query Frame = 0

Query:    6 MVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSSXXXXXXXXXXXXXXXXXXXXXXXXXXHH------RSASPTRVNLYNPQPMMAQSFRYSLDSRSISPTNRSISVTKKPQPSSXXXXXKISSSPRRCMCSPTTHPGSFRCSLHKNVANPHGQGAASSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLRRRAAYQPRPSRLSIMSKATE 224
            MVTTSSRTKSNG VLRSQSPSGRFCG YSK+ PSS     XXXXXXXXXXXXXXXXX    HH      RSASPTRVNLY  QPM AQSFRYSLDSRSISPTNRSISV+KK QPSS     KIS + RRCMCSPTTHPGSFRCSLHKNVANPHGQGAA  SYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHL+RRAAYQPRPSRLSIMSKA +
Sbjct:    1 MVTTSSRTKSNGPVLRSQSPSGRFCGAYSKAVPSSSSSAFXXXXXXXXXXXXXXXXXNHRNHHDNHSHHRSASPTRVNLYTAQPM-AQSFRYSLDSRSISPTNRSISVSKKQQPSSH----KISETRRRCMCSPTTHPGSFRCSLHKNVANPHGQGAA--SYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSSHHLKRRAAYQPRPSRLSIMSKADD 218

The following BLAST results are available for this feature:

BLAST of C09p65760.1_BnaDARv10-RA vs. GenBank_protein

BLAST of C09p65760.1_BnaDARv10-RA vs. GenBank_protein
Analysis Date: 2021-04-17 (Diamond on Darmor-bzh OGS10 v10 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
XP_013712644.1	4.240e-129	100.00	uncharacterized serine-rich protein C215.13-like [...	[more]
XP_013606071.1	5.550e-127	97.79	PREDICTED: putative protein TPRXL [Brassica olerac...	[more]
XP_022549338.1	6.480e-123	93.81	putative protein TPRXL [Brassica napus]	[more]
KAF3563212.1	1.550e-122	93.67	hypothetical protein DY000_02019280 [Brassica cret...	[more]
XP_009121994.1	9.430e-121	93.42	putative protein TPRXL [Brassica rapa]	[more]
RID42370.1	1.200e-120	92.48	hypothetical protein BRARA_J02258 [Brassica rapa]	[more]
VDD20103.1	4.250e-120	94.12	unnamed protein product [Brassica rapa]	[more]
KAF3503085.1	1.270e-112	98.18	hypothetical protein F2Q69_00045048 [Brassica cret...	[more]
XP_018442157.1	1.150e-109	90.31	PREDICTED: putative protein TPRXL [Raphanus sativu...	[more]
XP_006399610.1	1.200e-101	83.56	putative protein TPRXL [Eutrema salsugineum] >ESQ4...	[more]

Pages

InterPro

Analysis Name: InterProScan on Darmor-bzh OGS10 v10
Date Performed: 2021-04-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	PANTHER	PTHR33132:SF74	SUBFAMILY NOT NAMED	coord: 6..226
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 6..226

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C09_BnaDARv10	contig	C09_BnaDARv10:60596588..60597268 - View in Apollo

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on Darmor-bzh OGS10 v10	2021-04-17
Diamond on Darmor-bzh OGS10 v10 vs NR	2021-04-17
Darmor-bzh OGS10 v10	2020-07-22

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
C09p65760.1_BnaDARv10-RA	C09p65760.1_BnaDARv10-RA	Brassica napus	mRNA	C09_BnaDARv10 60596247..60597369 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>C09p65760.1_BnaDARv10-PA ID=C09p65760.1_BnaDARv10-PA|Name=C09p65760.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=227bp
MQRKTMVTTSSRTKSNGHVLRSQSPSGRFCGDYSKSTPSSSSSSSSAFAS
STSSSFSSPSSSFFSNHHRSASPTRVNLYNPQPMMAQSFRYSLDSRSISP
TNRSISVTKKPQPSSHHHHHKISSSPRRCMCSPTTHPGSFRCSLHKNVAN
PHGQGAASSSYPTNSLNMRRSAMTNSLVRIGGVEGEWVRRALTTLIRPSS
HHLRRRAAYQPRPSRLSIMSKATECN.

Orthology

View orthology data for C09p65760.1_BnaDARv10-PA

Metabolic Model

View data from metabolic model for C09p65760.1_BnaDARv10-PA