A01p07850.1_BnaDARv10-PA (polypeptide) Brassica napus

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	A01p07850.1_BnaDARv10-RA
Unique Name	A01p07850.1_BnaDARv10-PA
Type	polypeptide
Organism	Brassica napus (cv. Darmor-bzh, rapeseed)
Sequence length	283

Homology

[Close]

BLAST of A01p07850.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013688414.1 (probable xyloglucan endotransglucosylase/hydrolase protein 17 [Brassica napus] >RID77836.1 hypothetical protein BRARA_A00715 [Brassica rapa] >CDY28176.1 BnaA01g06730D [Brassica napus])

HSP 1 Score: 612 bits (1578), Expect = 6.810e-222
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0

Query:    1 MKFSCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSESIGIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDKSGIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT 282
            MKFSCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSESIGIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDKSGIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT
Sbjct:    1 MKFSCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSESIGIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDKSGIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT 282

[Close]

BLAST of A01p07850.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_009127924.2 (probable xyloglucan endotransglucosylase/hydrolase protein 17 [Brassica rapa])

HSP 1 Score: 612 bits (1578), Expect = 2.710e-221
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0

Query:    1 MKFSCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSESIGIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDKSGIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT 282
            MKFSCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSESIGIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDKSGIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT
Sbjct:   38 MKFSCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSESIGIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDKSGIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT 319

[Close]

BLAST of A01p07850.1_BnaDARv10-RA vs. GenBank_protein
Match: KAF2586693.1 (hypothetical protein F2Q70_00034236 [Brassica cretica])

HSP 1 Score: 607 bits (1564), Expect = 9.290e-220
Identity = 279/282 (98.94%), Postives = 281/282 (99.65%), Query Frame = 0

Query:    1 MKFSCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSESIGIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDKSGIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT 282
            MK SCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSES+GIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDK+GIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT
Sbjct:    1 MKSSCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSESMGIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDKNGIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT 282

[Close]

BLAST of A01p07850.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013607653.1 (PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 17 [Brassica oleracea var. oleracea])

HSP 1 Score: 605 bits (1560), Expect = 3.790e-219
Identity = 278/282 (98.58%), Postives = 280/282 (99.29%), Query Frame = 0

Query:    1 MKFSCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSESIGIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDKSGIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT 282
            MK SCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSES+GIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDK+GIDKVKW QSKYMVYNYCTDTKRFPKGVPKVCT
Sbjct:    1 MKSSCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSESMGIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDKNGIDKVKWVQSKYMVYNYCTDTKRFPKGVPKVCT 282

[Close]

BLAST of A01p07850.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013680985.1 (probable xyloglucan endotransglucosylase/hydrolase protein 17 [Brassica napus] >VDD48474.1 unnamed protein product [Brassica oleracea])

HSP 1 Score: 603 bits (1556), Expect = 1.540e-218
Identity = 278/282 (98.58%), Postives = 280/282 (99.29%), Query Frame = 0

Query:    1 MKFSCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSESIGIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDKSGIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT 282
            MK SCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSES+GIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPW TQTLDK+GIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT
Sbjct:    1 MKSSCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSESMGIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWSTQTLDKNGIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT 282

[Close]

BLAST of A01p07850.1_BnaDARv10-RA vs. GenBank_protein
Match: KAF3530830.1 (hypothetical protein DY000_02036971 [Brassica cretica])

HSP 1 Score: 602 bits (1553), Expect = 4.420e-218
Identity = 278/282 (98.58%), Postives = 280/282 (99.29%), Query Frame = 0

Query:    1 MKFSCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSESIGIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDKSGIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT 282
            MK SCGTRFAFLALFLFALQSV VYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSES+GIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDK+GIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT
Sbjct:    1 MKSSCGTRFAFLALFLFALQSVYVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSESMGIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDKNGIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT 282

[Close]

BLAST of A01p07850.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_018446815.1 (PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 17 [Raphanus sativus])

HSP 1 Score: 598 bits (1541), Expect = 2.990e-216
Identity = 276/282 (97.87%), Postives = 278/282 (98.58%), Query Frame = 0

Query:    1 MKFSCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSESIGIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDKSGIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT 282
            MKFS GTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHP TLHTNVYTKGTGDKEQQFHLWFDPT GFHTYCITWNPQRIIFTVDGIPIREFKNSE+IGIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQ LD+SGIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT
Sbjct:    1 MKFSYGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPVTLHTNVYTKGTGDKEQQFHLWFDPTAGFHTYCITWNPQRIIFTVDGIPIREFKNSETIGIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQKLDQSGIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT 282

[Close]

BLAST of A01p07850.1_BnaDARv10-RA vs. GenBank_protein
Match: VDC74227.1 (unnamed protein product, partial [Brassica rapa])

HSP 1 Score: 590 bits (1521), Expect = 7.050e-213
Identity = 270/282 (95.74%), Postives = 277/282 (98.23%), Query Frame = 0

Query:    1 MKFSCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSESIGIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDKSGIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT 282
            MK SCGTR AFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYT+G+GDKEQQFHLWFDPT  FHTYCITWNPQRIIFTVDGIPIREFKNSESIG+PFPK+QPMR+YASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLD+ GIDK+KWAQSKYMVYNYCTDTKRFPKGVPKVCT
Sbjct:   21 MKPSCGTRLAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTQGSGDKEQQFHLWFDPTKNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPKNQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDQRGIDKMKWAQSKYMVYNYCTDTKRFPKGVPKVCT 302

[Close]

BLAST of A01p07850.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_009127934.1 (probable xyloglucan endotransglucosylase/hydrolase protein 18 [Brassica rapa] >XP_013688523.1 probable xyloglucan endotransglucosylase/hydrolase protein 18 [Brassica napus] >XP_013690494.1 probable xyloglucan endotransglucosylase/hydrolase protein 18 [Brassica napus] >RID77837.1 hypothetical protein BRARA_A00716 [Brassica rapa] >CDY28175.1 BnaA01g06740D [Brassica napus])

HSP 1 Score: 577 bits (1487), Expect = 5.130e-208
Identity = 263/282 (93.26%), Postives = 272/282 (96.45%), Query Frame = 0

Query:    1 MKFSCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSESIGIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDKSGIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT 282
            MKFSCGTRFAFL LFL A QSV VYAGSFHKDVQIHWGDGRGK+ D +GKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLV GNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYT+G+GDKEQQFHLWFDPT  FHTYCITWNPQRIIFTVDGIPIREFKNSESIG+PFPK+QPMR+YASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLD+ GIDK+KWAQSKYMVYNYCTDTKRFPKGVPKVCT
Sbjct:    1 MKFSCGTRFAFLVLFLIAAQSVAVYAGSFHKDVQIHWGDGRGKVRDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVAGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTQGSGDKEQQFHLWFDPTKNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPKNQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDQRGIDKMKWAQSKYMVYNYCTDTKRFPKGVPKVCT 282

[Close]

BLAST of A01p07850.1_BnaDARv10-RA vs. GenBank_protein
Match: XP_013607645.1 (PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 18 [Brassica oleracea var. oleracea])

HSP 1 Score: 577 bits (1487), Expect = 5.130e-208
Identity = 263/282 (93.26%), Postives = 272/282 (96.45%), Query Frame = 0

Query:    1 MKFSCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYCITWNPQRIIFTVDGIPIREFKNSESIGIPFPKDQPMRVYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDKSGIDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT 282
            MKFSCGTRFAFL LFL A QSV VYAGSFHKDVQIHWGDGRGK+ D +GKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLV GNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYT+G+GDKEQQFHLWFDPT  FHTYCITWNPQRIIFTVDGIPIREFKNSESIG+PFPK+QPMR+YASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLD+ GIDK+KWAQSKYMVYNYCTDTKRFPKGVPKVCT
Sbjct:    1 MKFSCGTRFAFLVLFLIAAQSVAVYAGSFHKDVQIHWGDGRGKVRDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVAGNSAGTVTTFYLKAPGTMWDEIDFEFLGNISGHPYTLHTNVYTQGSGDKEQQFHLWFDPTRNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPKNQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDQRGIDKMKWAQSKYMVYNYCTDTKRFPKGVPKVCT 282

The following BLAST results are available for this feature:

BLAST of A01p07850.1_BnaDARv10-RA vs. GenBank_protein

BLAST of A01p07850.1_BnaDARv10-RA vs. GenBank_protein
Analysis Date: 2021-04-17 (Diamond on Darmor-bzh OGS10 v10 vs NR)
Total hits: 20

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
XP_013688414.1	6.810e-222	100.00	probable xyloglucan endotransglucosylase/hydrolase...	[more]
XP_009127924.2	2.710e-221	100.00	probable xyloglucan endotransglucosylase/hydrolase...	[more]
KAF2586693.1	9.290e-220	98.94	hypothetical protein F2Q70_00034236 [Brassica cret...	[more]
XP_013607653.1	3.790e-219	98.58	PREDICTED: probable xyloglucan endotransglucosylas...	[more]
XP_013680985.1	1.540e-218	98.58	probable xyloglucan endotransglucosylase/hydrolase...	[more]
KAF3530830.1	4.420e-218	98.58	hypothetical protein DY000_02036971 [Brassica cret...	[more]
XP_018446815.1	2.990e-216	97.87	PREDICTED: probable xyloglucan endotransglucosylas...	[more]
VDC74227.1	7.050e-213	95.74	unnamed protein product, partial [Brassica rapa]	[more]
XP_009127934.1	5.130e-208	93.26	probable xyloglucan endotransglucosylase/hydrolase...	[more]
XP_013607645.1	5.130e-208	93.26	PREDICTED: probable xyloglucan endotransglucosylas...	[more]

Pages

1
2
next ›
last »

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042546	cell wall biogenesis
biological_process	GO:0071555	cell wall organization
biological_process	GO:0010411	xyloglucan metabolic process
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005618	cell wall
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0016762	xyloglucan:xyloglucosyl transferase activity

InterPro

Analysis Name: InterProScan on Darmor-bzh OGS10 v10
Date Performed: 2021-04-17

ZOOM

x 1

POSITION

0


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008264	Beta-glucanase	PRINTS	PR00737	GLHYDRLASE16	coord: 138..155 score: 46.76 coord: 120..133 score: 40.48 coord: 62..80 score: 37.28
IPR000757	Glycoside hydrolase family 16	PFAM	PF00722	Glyco_hydro_16	coord: 31..211 e-value: 5.1E-57 score: 192.2
IPR000757	Glycoside hydrolase family 16	PROSITE	PS51762	GH16_2	coord: 1..218 score: 26.76
IPR016455	Xyloglucan endotransglucosylase/hydrolase	PIRSF	PIRSF005604	EndGlu_transf	coord: 2..282 e-value: 1.6E-106 score: 353.6
IPR010713	Xyloglucan endo-transglycosylase, C-terminal	PFAM	PF06955	XET_C	coord: 237..281 e-value: 2.9E-18 score: 65.4
None	No IPR available	GENE3D	2.60.120.200		coord: 17..282 e-value: 1.2E-99 score: 335.1
None	No IPR available	PANTHER	PTHR31062:SF157	XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 19-RELATED	coord: 1..282
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..26
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..8
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 20..26
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 9..19
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 27..282
None	No IPR available	SIGNALP_GRAM_NEGATIVE	SignalP-noTM	SignalP-noTM	coord: 1..26 score: 0.823
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..26 score: 0.88
None	No IPR available	SIGNALP_GRAM_POSITIVE	SignalP-TM	SignalP-TM	coord: 1..26 score: 0.508
None	No IPR available	TMHMM	TMhelix		coord: 7..29
IPR044791	Beta-glucanase/XTH	PANTHER	PTHR31062	XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED	coord: 1..282
IPR008263	Glycoside hydrolase, family 16, active site	PROSITE	PS01034	GH16_1	coord: 104..114
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	SUPERFAMILY	49899	Concanavalin A-like lectins/glucanases	coord: 30..281

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
A01_BnaDARv10	contig	A01_BnaDARv10:3484548..3485591 + View in Apollo

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on Darmor-bzh OGS10 v10	2021-04-17
Diamond on Darmor-bzh OGS10 v10 vs NR	2021-04-17
Blast2GO on Darmor-bzh OGS10 v10	2021-04-17
Darmor-bzh OGS10 v10	2020-07-22

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
A01p07850.1_BnaDARv10-RA	A01p07850.1_BnaDARv10-RA	Brassica napus	mRNA	A01_BnaDARv10 3484529..3485591 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>A01p07850.1_BnaDARv10-PA ID=A01p07850.1_BnaDARv10-PA|Name=A01p07850.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=283bp
MKFSCGTRFAFLALFLFALQSVCVYAGSFHKDVQIHWGDGRGKIHDNEGK
LLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKAPGT
MWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTLGFHTYC
ITWNPQRIIFTVDGIPIREFKNSESIGIPFPKDQPMRVYASLWEAEHWAT
RGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPANSPWFTQTLDKSG
IDKVKWAQSKYMVYNYCTDTKRFPKGVPKVCT.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013320	ConA-like_dom_sf
IPR008263	GH16_AS
IPR044791	Beta-glucanase/XTH
IPR010713	XET_C
IPR016455	XTH
IPR000757	GH16
IPR008264	Beta_glucanase

Vocabulary: **Biological Process**
Term	Definition
GO:0042546	cell wall biogenesis
GO:0010411	xyloglucan metabolic process
GO:0071555	cell wall organization

Vocabulary: **Molecular Function**
Term	Definition
GO:0016762	xyloglucan:xyloglucosyl transferase activity
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane
GO:0005618	cell wall
GO:0048046	apoplast

Orthology

View orthology data for A01p07850.1_BnaDARv10-PA

Metabolic Model

View data from metabolic model for A01p07850.1_BnaDARv10-PA