Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1551 |
| Exons | 7 |
| Cds size | 1551 |
Relationships
This mRNA is a part of the following gene feature(s):
| Feature Name | Unique Name | Species | Type | Position |
|---|
| A01p03270.1_BnaDARv10 | A01p03270.1_BnaDARv10 | Brassica napus | gene | A01_BnaDARv10 1508194..1510804 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1626340463.2494617-CDS-A01_BnaDARv10:1508193..1508437 | 1626340463.2494617-CDS-A01_BnaDARv10:1508193..1508437 | Brassica napus | CDS | A01_BnaDARv10 1508194..1508437 + |
| 1626340463.2564912-CDS-A01_BnaDARv10:1508840..1509545 | 1626340463.2564912-CDS-A01_BnaDARv10:1508840..1509545 | Brassica napus | CDS | A01_BnaDARv10 1508841..1509545 + |
| 1626340463.2624032-CDS-A01_BnaDARv10:1509754..1509951 | 1626340463.2624032-CDS-A01_BnaDARv10:1509754..1509951 | Brassica napus | CDS | A01_BnaDARv10 1509755..1509951 + |
| 1626340463.2682374-CDS-A01_BnaDARv10:1510013..1510127 | 1626340463.2682374-CDS-A01_BnaDARv10:1510013..1510127 | Brassica napus | CDS | A01_BnaDARv10 1510014..1510127 + |
| 1626340463.2742414-CDS-A01_BnaDARv10:1510276..1510331 | 1626340463.2742414-CDS-A01_BnaDARv10:1510276..1510331 | Brassica napus | CDS | A01_BnaDARv10 1510277..1510331 + |
| 1626340463.280352-CDS-A01_BnaDARv10:1510485..1510572 | 1626340463.280352-CDS-A01_BnaDARv10:1510485..1510572 | Brassica napus | CDS | A01_BnaDARv10 1510486..1510572 + |
| 1626340463.2863486-CDS-A01_BnaDARv10:1510655..1510804 | 1626340463.2863486-CDS-A01_BnaDARv10:1510655..1510804 | Brassica napus | CDS | A01_BnaDARv10 1510656..1510804 + |
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| A01p03270.1_BnaDARv10_exon1 | A01p03270.1_BnaDARv10_exon1 | Brassica napus | exon | A01_BnaDARv10 1508194..1508437 + |
| A01p03270.1_BnaDARv10_exon2 | A01p03270.1_BnaDARv10_exon2 | Brassica napus | exon | A01_BnaDARv10 1508841..1509545 + |
| A01p03270.1_BnaDARv10_exon3 | A01p03270.1_BnaDARv10_exon3 | Brassica napus | exon | A01_BnaDARv10 1509755..1509951 + |
| A01p03270.1_BnaDARv10_exon4 | A01p03270.1_BnaDARv10_exon4 | Brassica napus | exon | A01_BnaDARv10 1510014..1510127 + |
| A01p03270.1_BnaDARv10_exon5 | A01p03270.1_BnaDARv10_exon5 | Brassica napus | exon | A01_BnaDARv10 1510277..1510331 + |
| A01p03270.1_BnaDARv10_exon6 | A01p03270.1_BnaDARv10_exon6 | Brassica napus | exon | A01_BnaDARv10 1510486..1510572 + |
| A01p03270.1_BnaDARv10_exon7 | A01p03270.1_BnaDARv10_exon7 | Brassica napus | exon | A01_BnaDARv10 1510656..1510804 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >A01p03270.1_BnaDARv10-RA ID=A01p03270.1_BnaDARv10-RA|Name=A01p03270.1_BnaDARv10-RA|organism=Brassica napus|type=mRNA|length=1551bp|location=Sequence derived from alignment at A01_BnaDARv10:1508194..1510804+ (Brassica napus)|Notes=Excludes all bases but those of type(s): exon.
ATGGTTGGTGAAGTAGACTCGAACGAGCCACAAACCGTCGTTGACGGTGG
CCAAGGAGGAGAGGTGGTTTCTGTGAACGTCAGGTGCTCCAACGGCTCCA
AATTTAGCGTGAGAACGAGCCTTGAATCAACCGTAGAGTCTTTCAAAGCT
CTGGTAGCTCAGAACTGCGACGTCCCAGCTAACCAGCAGCGCTTGATTTA
CAAGGGACGCATCCTCATGGATGATCACACTCTCCTGAGCTATGGTTTAC
AAGCGGATCAGGCTCTTCATATGGTTCGAGGCTCTGCACCTCCTGGGAGC
CAAACTATTACTCCACCTAGTGTTACTCGAGGGGTTGGTTCTAATGATAC
TCCAAACACTGGAGGAGAATCTTTGTTTGGATTTAATCCTTTAGGTAGTG
GAAATGCTATGCCTCCTGGGCTGTTTGGAGCTGCTGGACTTCCGGATCTC
CAGCAAGCACATCAACAGCTAGCTCAGAACCCAAACATGGTTAGAGACAT
GATGAACGCACCAACCATTCAGAATATTATGAACAACCCTGAGCTAATGA
GGACTTTGATAATGAGCAACCCTCAGATGCGCGAGCTTGTGGATCGCAAC
CCTGAGCTTGGACATATACTCAACGACCCGAGCGTCCTTAGGCAGAGCTT
GGAAGCTGCGAGGAACCCTGAGCTTATGCGCGAGATGACGCGGAGTACTG
ATAGGGCGATGAGTAATATTGAAGCTACTCCTGAGGGGTTTAACATGCTT
AGGAGGATGTATGAGAATGTCCAGGAACCGTTGATGAACGCTACAACAAA
CAATGCCGGTTCTAATCTATTTGCTACTACTCTCTTGGGGAATCAGGGAG
CTGCTTCTAACAATCCCATGACGACCAATGGTGAAACAGGCACAGGCAAT
GCTGTGCCGAATACAAATCCACTTCCAAATCCTTGGGATGCTGCAGGTGG
TCAGACAACTACGGCTGGAAGGACCAATTCAGGTGGGGATACTAGAGCCC
CTGGCCTTGGTGGACTAGGCATGCTAGGTGGGGATCCAACGGTTGGTGCT
ACACCAGATGCCTCTCAAATGAACCAGTTTCTGCAAAATCCAGCCATGTC
ACAGATGATGCAGAGCTTACTTTCCAATCCACAATATATGAATCAGATCA
TGAGTCTAAACCCACAACTCCAAAGCTTGATGGATTCAAGTCCTCAGGTG
AGGGAGATGATGCAGAATCCGGAGTTCCTTCGTATGCTTAGCTCCCCAGA
GACAATGCAGCAAATGATGAGTCTGCAGCAATCACTGTTATCTGGAAATA
GGAGTACGACCACAGGTAATAAAGGAGGGCTGGATTCATTGATGAGTATT
TTTGGCAGTCTTGGTGCTGGCGGCGGCTTGAGTGGTGCGAACCAGTCTAA
TGTACCTCCTGAGGAGCTATACGCCACACAATTGCAACAGCTAGAGGAAA
TGGGATTCTTTGACAGAGCAGAGAACATTAGGGCGTTGCGTGCAGCCAAC
GGCAACGTTAACGCTGCTGTAGAAAGACTCTTGGGGAGTATCGGCCAGTG
A back to topprotein sequence of A01p03270.1_BnaDARv10-RA >A01p03270.1_BnaDARv10-PA ID=A01p03270.1_BnaDARv10-PA|Name=A01p03270.1_BnaDARv10-RA|organism=Brassica napus|type=polypeptide|length=517bp
MVGEVDSNEPQTVVDGGQGGEVVSVNVRCSNGSKFSVRTSLESTVESFKA
LVAQNCDVPANQQRLIYKGRILMDDHTLLSYGLQADQALHMVRGSAPPGS
QTITPPSVTRGVGSNDTPNTGGESLFGFNPLGSGNAMPPGLFGAAGLPDL
QQAHQQLAQNPNMVRDMMNAPTIQNIMNNPELMRTLIMSNPQMRELVDRN
PELGHILNDPSVLRQSLEAARNPELMREMTRSTDRAMSNIEATPEGFNML
RRMYENVQEPLMNATTNNAGSNLFATTLLGNQGAASNNPMTTNGETGTGN
AVPNTNPLPNPWDAAGGQTTTAGRTNSGGDTRAPGLGGLGMLGGDPTVGA
TPDASQMNQFLQNPAMSQMMQSLLSNPQYMNQIMSLNPQLQSLMDSSPQV
REMMQNPEFLRMLSSPETMQQMMSLQQSLLSGNRSTTTGNKGGLDSLMSI
FGSLGAGGGLSGANQSNVPPEELYATQLQQLEEMGFFDRAENIRALRAAN
GNVNAAVERLLGSIGQ. back to topmRNA from alignment at A01_BnaDARv10:1508194..1510804+ Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >A01p03270.1_BnaDARv10-RA ID=A01p03270.1_BnaDARv10-RA|Name=A01p03270.1_BnaDARv10-RA|organism=Brassica napus|type=mRNA|length=2611bp|location=Sequence derived from alignment at A01_BnaDARv10:1508194..1510804+ (Brassica napus)
ATGGTTGGTGAAGTAGACTCGAACGAGCCACAAACCGTCGTTGACGGTGG
CCAAGGAGGAGAGGTGGTTTCTGTGAACGTCAGGTGCTCCAACGGCTCCA
AATTTAGCGTGAGAACGAGCCTTGAATCAACCGTAGAGTCTTTCAAAGCT
CTGGTAGCTCAGAACTGCGACGTCCCAGCTAACCAGCAGCGCTTGATTTA
CAAGGGACGCATCCTCATGGATGATCACACTCTCCTGAGCTATGGTAAAA
TCCTCAAAGACTTAACCTTTTGTGGTTTTCAATGAAAACTTTTCATACTC
AAGAAAACAATAAAAGAAGCTTCTTTGGGAATATAAAACAATTAAGATAT
TTCAGATTAATAGTAACCTGCGGGACAACTGCCGAATTTTATACGTAGAG
ATTTTTGTTACTTAACAGCGGTGAACCTTACTATCATCATGTAACCTCTA
GGTTTACAGACAGATCAAGCTGATCCAATAAAAATACATATATTTAAAAT
ATATGTAGAGATTTTTGTTACTATTAACTGAGGTGAACCTTAGTATCTTG
TAATCTTACAGACGGATCAAGTTGATCTAATAAAAATATATATTTAAAAT
ATATATAGAGATTTTTGTTAATATTAACTGTGGTGAACAACCTCTAGGTT
TACAAGCGGATCAGGCTCTTCATATGGTTCGAGGCTCTGCACCTCCTGGG
AGCCAAACTATTACTCCACCTAGTGTTACTCGAGGGGTTGGTTCTAATGA
TACTCCAAACACTGGAGGAGAATCTTTGTTTGGATTTAATCCTTTAGGTA
GTGGAAATGCTATGCCTCCTGGGCTGTTTGGAGCTGCTGGACTTCCGGAT
CTCCAGCAAGCACATCAACAGCTAGCTCAGAACCCAAACATGGTTAGAGA
CATGATGAACGCACCAACCATTCAGAATATTATGAACAACCCTGAGCTAA
TGAGGACTTTGATAATGAGCAACCCTCAGATGCGCGAGCTTGTGGATCGC
AACCCTGAGCTTGGACATATACTCAACGACCCGAGCGTCCTTAGGCAGAG
CTTGGAAGCTGCGAGGAACCCTGAGCTTATGCGCGAGATGACGCGGAGTA
CTGATAGGGCGATGAGTAATATTGAAGCTACTCCTGAGGGGTTTAACATG
CTTAGGAGGATGTATGAGAATGTCCAGGAACCGTTGATGAACGCTACAAC
AAACAATGCCGGTTCTAATCTATTTGCTACTACTCTCTTGGGGAATCAGG
GAGCTGCTTCTAACAATCCCATGACGACCAATGGTGAAACAGGCACAGGC
AATGCTGTGCCGAATACAAATCCACTTCCAAATCCTTGGGATGCTGCAGG
TGGTATGAAACTATACTCTTCTGCTTAGTACTTGTTGGGTATAACGGAAA
CTATAGTTTACACACTAGTTCAGGAACAATGTGATATAGTAATTGGTTGT
TGTAGTTCTCACAGTTCCTTGTCTTTAATGGTTAAGTAAACAACTTTTTT
TGTCAGCACTTTGTATAATGTAATAAAGATGACTGAACGTTTCTGTGCTC
TTACTTGACAGGTCAGACAACTACGGCTGGAAGGACCAATTCAGGTGGGG
ATACTAGAGCCCCTGGCCTTGGTGGACTAGGCATGCTAGGTGGGGATCCA
ACGGTTGGTGCTACACCAGATGCCTCTCAAATGAACCAGTTTCTGCAAAA
TCCAGCCATGTCACAGATGATGCAGAGCTTACTTTCCAATCCACAATATA
TGAATCAGGTAATGCATAGATTAATATCTTTTAGGCCTTGGTTGTTATTG
ATGGTATCTTTCAATTTCAGATCATGAGTCTAAACCCACAACTCCAAAGC
TTGATGGATTCAAGTCCTCAGGTGAGGGAGATGATGCAGAATCCGGAGTT
CCTTCGTATGCTTAGCTCCCCAGAGACAATGCAGGTCTGTTCAGCCTACT
CACATTTGCCTCTACTGTGTTTATTATGCATATGGTCTCTTCACAAAAGT
TTTTTTTTTGTGGATCTTTAAGTTATTTAAAATGTGATGGAGTTTCTCCA
AGCTAATGTTTGTGGATTTGTTTTTGTCCGTAGCAAATGATGAGTCTGCA
GCAATCACTGTTATCTGGAAATAGGAGTACGACCACAGGTACTCTTGGAA
TTAAAAATATTAATCGTTGCATCCACAATTCAAAGGCCTTATCACTTAGT
GTTACTCACTTCTATGTCTGTCTTTGCATATTCTGATTATAATTTCATCT
GCAGTTAATGGATTGAGTGGTTATTAATACTCAATGGAACAGGTAATAAA
GGAGGGCTGGATTCATTGATGAGTATTTTTGGCAGTCTTGGTGCTGGCGG
CGGCTTGAGTGGTGCGAACCAGTCTAATGGTGAGATTGCAGTTTTTTCTT
TGAAATGTAATCTACACTTGAGATGGTTTTCTGTTTAAATGTGTTTTTTT
TTGTGGTTGCAGTACCTCCTGAGGAGCTATACGCCACACAATTGCAACAG
CTAGAGGAAATGGGATTCTTTGACAGAGCAGAGAACATTAGGGCGTTGCG
TGCAGCCAACGGCAACGTTAACGCTGCTGTAGAAAGACTCTTGGGGAGTA
TCGGCCAGTGA back to topCoding sequence (CDS) from alignment at A01_BnaDARv10:1508194..1510804+ >A01p03270.1_BnaDARv10-RA ID=A01p03270.1_BnaDARv10-RA|Name=A01p03270.1_BnaDARv10-RA|organism=Brassica napus|type=CDS|length=1551bp|location=Sequence derived from alignment at A01_BnaDARv10:1508194..1510804+ (Brassica napus)
ATGGTTGGTGAAGTAGACTCGAACGAGCCACAAACCGTCGTTGACGGTGG
CCAAGGAGGAGAGGTGGTTTCTGTGAACGTCAGGTGCTCCAACGGCTCCA
AATTTAGCGTGAGAACGAGCCTTGAATCAACCGTAGAGTCTTTCAAAGCT
CTGGTAGCTCAGAACTGCGACGTCCCAGCTAACCAGCAGCGCTTGATTTA
CAAGGGACGCATCCTCATGGATGATCACACTCTCCTGAGCTATGGTTTAC
AAGCGGATCAGGCTCTTCATATGGTTCGAGGCTCTGCACCTCCTGGGAGC
CAAACTATTACTCCACCTAGTGTTACTCGAGGGGTTGGTTCTAATGATAC
TCCAAACACTGGAGGAGAATCTTTGTTTGGATTTAATCCTTTAGGTAGTG
GAAATGCTATGCCTCCTGGGCTGTTTGGAGCTGCTGGACTTCCGGATCTC
CAGCAAGCACATCAACAGCTAGCTCAGAACCCAAACATGGTTAGAGACAT
GATGAACGCACCAACCATTCAGAATATTATGAACAACCCTGAGCTAATGA
GGACTTTGATAATGAGCAACCCTCAGATGCGCGAGCTTGTGGATCGCAAC
CCTGAGCTTGGACATATACTCAACGACCCGAGCGTCCTTAGGCAGAGCTT
GGAAGCTGCGAGGAACCCTGAGCTTATGCGCGAGATGACGCGGAGTACTG
ATAGGGCGATGAGTAATATTGAAGCTACTCCTGAGGGGTTTAACATGCTT
AGGAGGATGTATGAGAATGTCCAGGAACCGTTGATGAACGCTACAACAAA
CAATGCCGGTTCTAATCTATTTGCTACTACTCTCTTGGGGAATCAGGGAG
CTGCTTCTAACAATCCCATGACGACCAATGGTGAAACAGGCACAGGCAAT
GCTGTGCCGAATACAAATCCACTTCCAAATCCTTGGGATGCTGCAGGTGG
TCAGACAACTACGGCTGGAAGGACCAATTCAGGTGGGGATACTAGAGCCC
CTGGCCTTGGTGGACTAGGCATGCTAGGTGGGGATCCAACGGTTGGTGCT
ACACCAGATGCCTCTCAAATGAACCAGTTTCTGCAAAATCCAGCCATGTC
ACAGATGATGCAGAGCTTACTTTCCAATCCACAATATATGAATCAGATCA
TGAGTCTAAACCCACAACTCCAAAGCTTGATGGATTCAAGTCCTCAGGTG
AGGGAGATGATGCAGAATCCGGAGTTCCTTCGTATGCTTAGCTCCCCAGA
GACAATGCAGCAAATGATGAGTCTGCAGCAATCACTGTTATCTGGAAATA
GGAGTACGACCACAGGTAATAAAGGAGGGCTGGATTCATTGATGAGTATT
TTTGGCAGTCTTGGTGCTGGCGGCGGCTTGAGTGGTGCGAACCAGTCTAA
TGTACCTCCTGAGGAGCTATACGCCACACAATTGCAACAGCTAGAGGAAA
TGGGATTCTTTGACAGAGCAGAGAACATTAGGGCGTTGCGTGCAGCCAAC
GGCAACGTTAACGCTGCTGTAGAAAGACTCTTGGGGAGTATCGGCCAGTG
A back to top
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