BraAnng004690.3.5C.6-P1 (polypeptide) Brassica rapa chifu

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameBraAnng004690.3.5C.6
Unique NameBraAnng004690.3.5C.6-P1
Typepolypeptide
OrganismBrassica rapa chifu (field mustard)
Sequence length226
Homology
BLAST of BraAnng004690.3.5C.6 vs. GenBank_protein
Match: XP_022575703.1 (uncharacterized protein BNACNNG40720D [Brassica napus] >VDD25043.1 unnamed protein product [Brassica rapa])

HSP 1 Score: 444 bits (1142), Expect = 3.360e-153
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
Query:    1 MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS 225
            MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS
Sbjct:  263 MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS 487          
BLAST of BraAnng004690.3.5C.6 vs. GenBank_protein
Match: RID64706.1 (hypothetical protein BRARA_E03625 [Brassica rapa])

HSP 1 Score: 444 bits (1142), Expect = 3.360e-153
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
Query:    1 MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS 225
            MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS
Sbjct:  263 MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS 487          
BLAST of BraAnng004690.3.5C.6 vs. GenBank_protein
Match: XP_009124054.2 (uncharacterized protein LOC103848972 [Brassica rapa])

HSP 1 Score: 444 bits (1142), Expect = 3.360e-153
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
Query:    1 MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS 225
            MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS
Sbjct:  263 MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS 487          
BLAST of BraAnng004690.3.5C.6 vs. GenBank_protein
Match: CAF1793558.1 (unnamed protein product [Brassica napus])

HSP 1 Score: 444 bits (1142), Expect = 5.700e-153
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0
Query:    1 MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS 225
            MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS
Sbjct:  279 MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS 503          
BLAST of BraAnng004690.3.5C.6 vs. GenBank_protein
Match: KAF8081795.1 (hypothetical protein N665_0866s0003 [Sinapis alba])

HSP 1 Score: 442 bits (1138), Expect = 1.360e-152
Identity = 224/225 (99.56%), Postives = 224/225 (99.56%), Query Frame = 0
Query:    1 MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS 225
            MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEK GIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS
Sbjct:  263 MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKFGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS 487          
BLAST of BraAnng004690.3.5C.6 vs. GenBank_protein
Match: KAG2273356.1 (hypothetical protein Bca52824_067911 [Brassica carinata])

HSP 1 Score: 442 bits (1137), Expect = 1.930e-152
Identity = 224/225 (99.56%), Postives = 224/225 (99.56%), Query Frame = 0
Query:    1 MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS 225
            MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIG TTEELVLKAKQGVTPS
Sbjct:  263 MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGNTTEELVLKAKQGVTPS 487          
BLAST of BraAnng004690.3.5C.6 vs. GenBank_protein
Match: XP_018466368.1 (PREDICTED: uncharacterized protein LOC108837858 [Raphanus sativus])

HSP 1 Score: 442 bits (1136), Expect = 2.730e-152
Identity = 224/225 (99.56%), Postives = 224/225 (99.56%), Query Frame = 0
Query:    1 MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS 225
            MIVVYRRASSKTN ERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS
Sbjct:  263 MIVVYRRASSKTNQERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS 487          
BLAST of BraAnng004690.3.5C.6 vs. GenBank_protein
Match: VVA95998.1 (unnamed protein product [Arabis nemorensis])

HSP 1 Score: 437 bits (1123), Expect = 2.490e-150
Identity = 220/225 (97.78%), Postives = 223/225 (99.11%), Query Frame = 0
Query:    1 MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS 225
            MIVVYRRASSKTN ERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAV+TSVEMPKADPWVI A+LSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSG+GTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS
Sbjct:  262 MIVVYRRASSKTNQERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVLTSVEMPKADPWVIIAILSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGRGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS 486          
BLAST of BraAnng004690.3.5C.6 vs. GenBank_protein
Match: KAG5399441.1 (hypothetical protein IGI04_021255 [Brassica rapa subsp. trilocularis])

HSP 1 Score: 436 bits (1120), Expect = 7.840e-150
Identity = 224/226 (99.12%), Postives = 224/226 (99.12%), Query Frame = 0
Query:    1 MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLE-DLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS 225
            MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKAD WVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLE DLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS
Sbjct:  264 MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADLWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEVDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS 489          
BLAST of BraAnng004690.3.5C.6 vs. GenBank_protein
Match: XP_006408571.1 (uncharacterized protein LOC18024610 isoform X3 [Eutrema salsugineum] >ESQ50024.1 hypothetical protein EUTSA_v10020611mg [Eutrema salsugineum] >ESQ50026.1 hypothetical protein EUTSA_v10020611mg [Eutrema salsugineum])

HSP 1 Score: 435 bits (1118), Expect = 1.430e-149
Identity = 219/225 (97.33%), Postives = 223/225 (99.11%), Query Frame = 0
Query:    1 MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGLKRANEIIGTTTEELVLKAKQGVTPS 225
            MIVVYRRASSKTN+ERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAV+TSVEMPKADPWVI A+LSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGR+YCMGLKRANEIIGTTTEELVLKAKQGVT S
Sbjct:  262 MIVVYRRASSKTNIERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVKFLISAVVGLVAVLTSVEMPKADPWVIIAILSTVVGYCAKTYFTFQQNMATYQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKATLEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRFYCMGLKRANEIIGTTTEELVLKAKQGVTAS 486          
The following BLAST results are available for this feature:
BLAST of BraAnng004690.3.5C.6 vs. GenBank_protein
Analysis Date: 2022-02-26 (Diamond on OGS3.5 vs NR)
Total hits: 20
Match NameE-valueIdentityDescription
XP_022575703.13.360e-153100.00uncharacterized protein BNACNNG40720D [Brassica na... [more]
RID64706.13.360e-153100.00hypothetical protein BRARA_E03625 [Brassica rapa][more]
XP_009124054.23.360e-153100.00uncharacterized protein LOC103848972 [Brassica rap... [more]
CAF1793558.15.700e-153100.00unnamed protein product [Brassica napus][more]
KAF8081795.11.360e-15299.56hypothetical protein N665_0866s0003 [Sinapis alba][more]
KAG2273356.11.930e-15299.56hypothetical protein Bca52824_067911 [Brassica car... [more]
XP_018466368.12.730e-15299.56PREDICTED: uncharacterized protein LOC108837858 [R... [more]
VVA95998.12.490e-15097.78unnamed protein product [Arabis nemorensis][more]
KAG5399441.17.840e-15099.12hypothetical protein IGI04_021255 [Brassica rapa s... [more]
XP_006408571.11.430e-14997.33uncharacterized protein LOC18024610 isoform X3 [Eu... [more]

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GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0004177 aminopeptidase activity
InterPro
Analysis Name: InterProScan on OGS3.5
Date Performed: 2022-02-26
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 144..164
NoneNo IPR availablePANTHERPTHR33645:SF9SUBFAMILY NOT NAMEDcoord: 1..222
NoneNo IPR availablePANTHERPTHR33645AMINOPEPTIDASE (DUF3754)coord: 1..222
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..92
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 69..73
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 93..225
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..68
NoneNo IPR availableTMHMMTMhelixcoord: 75..94
NoneNo IPR availableTMHMMTMhelixcoord: 48..65
IPR022227Protein of unknown function DUF3754PFAMPF12576DUF3754coord: 14..119
e-value: 9.8E-24
score: 83.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold0923contigScaffold0923:74950..76107 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS3.52022-02-26
Diamond on OGS3.5 vs NR2022-02-26
Blast2GO on OGS3.52022-02-26
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
BraAnng004690.3.5C.6BraAnng004690.3.5C.6Brassica rapa chifumRNAScaffold0923 73391..76192 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>BraAnng004690.3.5C.6-P1 ID=BraAnng004690.3.5C.6-P1|Name=BraAnng004690.3.5C.6|organism=Brassica rapa chifu|type=polypeptide|length=226bp
MIVVYRRASSKTNLERGIYVKHFKNIPMADMEIVLPEKRNPGLTPMDWVK
FLISAVVGLVAVVTSVEMPKADPWVIFAVLSTVVGYCAKTYFTFQQNMAT
YQNLITQSMYDKQLDSGKGTLLHLCDDVIQQEVKEVMISFYILMEQGKAT
LEDLDLRCEELIKEEFGERCNFDVDDAVQKLEKLGIVARDTIGRYYCMGL
KRANEIIGTTTEELVLKAKQGVTPS.
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022227DUF3754
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0004177aminopeptidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0005886plasma membrane
GO:0005783endoplasmic reticulum