BraAnng004290.3.5C.1-P1 (polypeptide) Brassica rapa chifu
Overview
Homology
BLAST of BraAnng004290.3.5C.1 vs. GenBank_protein
Match: YP_004927514.1 (orf117a [Brassica oleracea] >YP_004927760.1 orf117a [Brassica juncea] >YP_004927857.1 orf117a [Brassica rapa subsp. oleifera] >YP_009907468.1 hypothetical protein [Brassica rapa] >YP_717139.1 hypothetical protein BrnapMp042 [Brassica napus] >AHY20336.1 hypothetical protein [Brassica juncea var. tumida] >AEH43431.1 orf117a [Brassica rapa subsp. oleifera] >AEH43542.1 orf117a [Brassica oleracea] >AEH43655.1 orf117a [Brassica juncea] >AIZ06186.1 hypothetical protein [Brassica napus]) HSP 1 Score: 157 bits (396), Expect = 1.170e-46 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 Query: 57 ENLAQSNGSNGSDYDRTTRKNNDESHHAIQELNAKMDKILKRDQKMTVNSCEEYGGYQGYQDFGVEGYEEPQEELNYVGG 136 ENLAQSNGSNGSDYDRTTRKNNDESHHAIQELNAKMDKILKRDQKMTVNSCEEYGGYQGYQDFGVEGYEEPQEELNYVGG Sbjct: 15 ENLAQSNGSNGSDYDRTTRKNNDESHHAIQELNAKMDKILKRDQKMTVNSCEEYGGYQGYQDFGVEGYEEPQEELNYVGG 94
BLAST of BraAnng004290.3.5C.1 vs. GenBank_protein
Match: AGY62805.1 (orf117 [Eruca vesicaria subsp. sativa]) HSP 1 Score: 157 bits (396), Expect = 1.170e-46 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 Query: 57 ENLAQSNGSNGSDYDRTTRKNNDESHHAIQELNAKMDKILKRDQKMTVNSCEEYGGYQGYQDFGVEGYEEPQEELNYVGG 136 ENLAQSNGSNGSDYDRTTRKNNDESHHAIQELNAKMDKILKRDQKMTVNSCEEYGGYQGYQDFGVEGYEEPQEELNYVGG Sbjct: 15 ENLAQSNGSNGSDYDRTTRKNNDESHHAIQELNAKMDKILKRDQKMTVNSCEEYGGYQGYQDFGVEGYEEPQEELNYVGG 94
BLAST of BraAnng004290.3.5C.1 vs. GenBank_protein
Match: KAG2247420.1 (hypothetical protein Bca52824_087048 [Brassica carinata]) HSP 1 Score: 117 bits (293), Expect = 1.250e-31 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 Query: 1 MEGSLESYPFPSNINITSCVSIKLNDRNYLLYDEGRVRLSPPNLGERCDFEERQSS 56 MEGSLESYPFPSNINITSCVSIKLNDRNYLLYDEGRVRLSPPNLGERCDFEERQSS Sbjct: 1 MEGSLESYPFPSNINITSCVSIKLNDRNYLLYDEGRVRLSPPNLGERCDFEERQSS 56
BLAST of BraAnng004290.3.5C.1 vs. GenBank_protein
Match: QGW48293.1 (hypothetical protein [Raphanus sativus] >QGW48515.1 hypothetical protein [Raphanus sativus]) HSP 1 Score: 117 bits (293), Expect = 1.600e-31 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 Query: 1 MEGSLESYPFPSNINITSCVSIKLNDRNYLLYDEGRVRLSPPNLGERCDFEERQSS 56 MEGSLESYPFPSNINITSCVSIKLNDRNYLLYDEGRVRLSPPNLGERCDFEERQSS Sbjct: 10 MEGSLESYPFPSNINITSCVSIKLNDRNYLLYDEGRVRLSPPNLGERCDFEERQSS 65
BLAST of BraAnng004290.3.5C.1 vs. GenBank_protein
Match: CDY45512.1 (BnaCnng12710D [Brassica napus] >VDD23994.1 unnamed protein product [Brassica rapa] >VDD25066.1 unnamed protein product [Brassica rapa] >VDD65152.1 unnamed protein product [Brassica oleracea] >VDD65186.1 unnamed protein product [Brassica oleracea]) HSP 1 Score: 117 bits (293), Expect = 1.300e-30 Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 Query: 1 MEGSLESYPFPSNINITSCVSIKLNDRNYLLYDEGRVRLSPPNLGERCDFEERQSS 56 MEGSLESYPFPSNINITSCVSIKLNDRNYLLYDEGRVRLSPPNLGERCDFEERQSS Sbjct: 82 MEGSLESYPFPSNINITSCVSIKLNDRNYLLYDEGRVRLSPPNLGERCDFEERQSS 137
BLAST of BraAnng004290.3.5C.1 vs. GenBank_protein
Match: VDD51071.1 (unnamed protein product, partial [Brassica oleracea]) HSP 1 Score: 114 bits (285), Expect = 3.820e-30 Identity = 59/66 (89.39%), Postives = 60/66 (90.91%), Query Frame = 0 Query: 1 MEGSLESYPFPSNINITSCVSIKLNDRNYLLYDEGRVRLSPPNLGERCDFEERQSS---ENLAQSN 63 MEGSLESY FPSNINITSCVSIKLNDRNYLLYDEGRVRLSPPNLGERCDFEE QSS ENL +SN Sbjct: 23 MEGSLESYHFPSNINITSCVSIKLNDRNYLLYDEGRVRLSPPNLGERCDFEEHQSSGVYENLHESN 88
BLAST of BraAnng004290.3.5C.1 vs. GenBank_protein
Match: CAF2075092.1 (unnamed protein product [Brassica napus]) HSP 1 Score: 114 bits (285), Expect = 2.120e-29 Identity = 59/66 (89.39%), Postives = 60/66 (90.91%), Query Frame = 0 Query: 1 MEGSLESYPFPSNINITSCVSIKLNDRNYLLYDEGRVRLSPPNLGERCDFEERQSS---ENLAQSN 63 MEGSLESY FPSNINITSCVSIKLNDRNYLLYDEGRVRLSPPNLGERCDFEE QSS ENL +SN Sbjct: 82 MEGSLESYHFPSNINITSCVSIKLNDRNYLLYDEGRVRLSPPNLGERCDFEEHQSSGVYENLHESN 147
BLAST of BraAnng004290.3.5C.1 vs. GenBank_protein
Match: P92518.1 (RecName: Full=Uncharacterized mitochondrial protein AtMg00770; AltName: Full=ORF100b [Arabidopsis thaliana] >AAM15420.1 hypothetical protein [Arabidopsis thaliana] >CAA69822.1 unnamed protein product [Arabidopsis thaliana]) HSP 1 Score: 99.4 bits (246), Expect = 4.330e-24 Identity = 47/50 (94.00%), Postives = 48/50 (96.00%), Query Frame = 0 Query: 1 MEGSLESYPFPSNINITSCVSIKLNDRNYLLYDEGRVRLSPPNLGERCDF 50 MEGSL+SYPFPSNINITSCVSIKLNDRNYLLYDEGRVRLS NLGERCDF Sbjct: 25 MEGSLKSYPFPSNINITSCVSIKLNDRNYLLYDEGRVRLSLLNLGERCDF 74
BLAST of BraAnng004290.3.5C.1 vs. GenBank_protein
Match: AAM15513.1 (hypothetical protein, partial [Arabidopsis thaliana]) HSP 1 Score: 97.8 bits (242), Expect = 1.520e-23 Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 0 Query: 1 MEGSLESYPFPSNINITSCVSIKLNDRNYLLYDEGRVRLSPPNLGERCDF 50 MEGSL+SYPFPSNINITSCVSIKLND+NYLLYDEGRVRLS NLGERCDF Sbjct: 25 MEGSLKSYPFPSNINITSCVSIKLNDQNYLLYDEGRVRLSLLNLGERCDF 74
BLAST of BraAnng004290.3.5C.1 vs. GenBank_protein
Match: XP_019100934.1 (PREDICTED: uncharacterized protein LOC104789646 [Camelina sativa]) HSP 1 Score: 69.3 bits (168), Expect = 1.290e-10 Identity = 44/80 (55.00%), Postives = 59/80 (73.75%), Query Frame = 0 Query: 57 ENLAQSNGSNGSDYDRTTRKNNDESHHAIQELNAKMDKILKRDQKMTVNSCEEYGGYQGYQDFGVEGYEEPQEELNYVGG 136 ENLA SN ++G+DYDRT R N+ ++ AI++L AK++ +LKRD + VNSCEE G GY DFG E Y+E EE+NY+GG Sbjct: 530 ENLAASNSNHGTDYDRTVRVNSVDTD-AIKDLTAKVNLLLKRDHQ-GVNSCEEQTG--GYADFGAETYQECAEEVNYIGG 605 The following BLAST results are available for this feature:
BLAST of BraAnng004290.3.5C.1 vs. GenBank_protein
Analysis Date: 2022-02-26 (Diamond on OGS3.5 vs NR) Total hits: 12
Pagesback to topGO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: InterProScan on OGS3.5
Date Performed: 2022-02-26
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BraAnng004290.3.5C.1-P1 ID=BraAnng004290.3.5C.1-P1|Name=BraAnng004290.3.5C.1|organism=Brassica rapa chifu|type=polypeptide|length=137bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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