BraAnng002260.3.5C.1-P1 (polypeptide) Brassica rapa chifu
Overview
Homology
BLAST of BraAnng002260.3.5C.1 vs. GenBank_protein
Match: CAF2224308.1 (unnamed protein product, partial [Brassica napus]) HSP 1 Score: 419 bits (1077), Expect = 1.490e-143 Identity = 207/222 (93.24%), Postives = 213/222 (95.95%), Query Frame = 0 Query: 1 MLPTLSRIQQTGKRSKWPPDHQDIVNSAKHIGLAKFCELLISDWAGRLQIYLWKPGAYDSTLIILGECSARARTSLGNKELEADQNALLLDHVKVWKPPDFQKLQYHFRDCQIKSGDGDFIRENGEVITGAGGGLMFSSQIKEKPPDGLSLHQTSNKQTRGNYLDSKKRMKPDLLSIGTGQTVLSARISEKRGYSNDQSIKNGSLAKLDMQQSNLGSCLAAN 222 MLPTLS IQQTGKRSKWPPDHQDIVNSAKHIGLAKFCELLISDWAGRLQIYLWKPGAYDSTLIILGECSARA+TS G KELEADQNALLLD+VKVWKPPD QKLQYHFRDCQ KSG+GDF +ENGEVITGAGGGLMFSSQIKEKPPDGLSLHQTSNKQTRGNYL SKKRMKPDLLSIGTGQTVLSARI +KRGYSNDQSIKNG LAKL+MQQSNLGSCLAAN Sbjct: 175 MLPTLSWIQQTGKRSKWPPDHQDIVNSAKHIGLAKFCELLISDWAGRLQIYLWKPGAYDSTLIILGECSARAKTSWGYKELEADQNALLLDNVKVWKPPDLQKLQYHFRDCQTKSGNGDFTKENGEVITGAGGGLMFSSQIKEKPPDGLSLHQTSNKQTRGNYLHSKKRMKPDLLSIGTGQTVLSARIFKKRGYSNDQSIKNGYLAKLEMQQSNLGSCLAAN 396
BLAST of BraAnng002260.3.5C.1 vs. GenBank_protein
Match: CAF2320592.1 (unnamed protein product, partial [Brassica napus]) HSP 1 Score: 415 bits (1067), Expect = 2.710e-142 Identity = 205/222 (92.34%), Postives = 207/222 (93.24%), Query Frame = 0 Query: 1 MLPTLSRIQQTGKRSKWPPDHQDIVNSAKHIGLAKFCELLISDWAGRLQIYLWKPGAYDSTLIILGECSARARTSLGNKELEADQNALLLDHVKVWKPPDFQKLQYHFRDCQIKSGDGDFIRENGEVITGAGGGLMFSSQIKEKPPDGLSLHQTSNKQTRGNYLDSKKRMKPDLLSIGTGQTVLSARISEKRGYSNDQSIKNGSLAKLDMQQSNLGSCLAAN 222 MLPTLS IQQTGK SKWPPDHQDIVNSAKHIGL KFCELLISDW GRLQIYLWKPGAYDSTLIILGECSARARTSLGNKELEADQNALLLDHVKVWKPPD QKLQYHFRDCQIKSGDGDFIR NGEVITG GG LMFSSQ KEKPPDGLSLHQ+ NK R NYLDSKKRMKPDLLSIGTGQTVLSARI EKRGYSNDQSIKNGSLAKL+MQQSNLGSCLA N Sbjct: 152 MLPTLSWIQQTGKHSKWPPDHQDIVNSAKHIGLVKFCELLISDWTGRLQIYLWKPGAYDSTLIILGECSARARTSLGNKELEADQNALLLDHVKVWKPPDLQKLQYHFRDCQIKSGDGDFIRVNGEVITGVGGKLMFSSQNKEKPPDGLSLHQSPNKSARDNYLDSKKRMKPDLLSIGTGQTVLSARIFEKRGYSNDQSIKNGSLAKLEMQQSNLGSCLATN 373
BLAST of BraAnng002260.3.5C.1 vs. GenBank_protein
Match: KAG5374081.1 (hypothetical protein IGI04_042644 [Brassica rapa subsp. trilocularis]) HSP 1 Score: 410 bits (1055), Expect = 8.610e-135 Identity = 203/222 (91.44%), Postives = 209/222 (94.14%), Query Frame = 0 Query: 1 MLPTLSRIQQTGKRSKWPPDHQDIVNSAKHIGLAKFCELLISDWAGRLQIYLWKPGAYDSTLIILGECSARARTSLGNKELEADQNALLLDHVKVWKPPDFQKLQYHFRDCQIKSGDGDFIRENGEVITGAGGGLMFSSQIKEKPPDGLSLHQTSNKQTRGNYLDSKKRMKPDLLSIGTGQTVLSARISEKRGYSNDQSIKNGSLAKLDMQQSNLGSCLAAN 222 MLPTLS IQQT KRSKWPPDHQDIVNSAKHIGLAKFCELLIS+WAGRLQIYLWKPGAYDSTL+ILGECSARARTSLGNKELEADQNALLLDHVKVWKPPD QKLQYHFRDCQIKSGDGDFIR NGEVITG GG LMFSSQ KEKPPDGLSLHQ+ NK RGNYLDSKKRMKPDLLSIGTGQTVLSA + E+ GYSNDQSIKNGSLAKL+MQQSNLGSCLAAN Sbjct: 348 MLPTLSWIQQTVKRSKWPPDHQDIVNSAKHIGLAKFCELLISNWAGRLQIYLWKPGAYDSTLMILGECSARARTSLGNKELEADQNALLLDHVKVWKPPDLQKLQYHFRDCQIKSGDGDFIRVNGEVITGVGGKLMFSSQNKEKPPDGLSLHQSPNKSARGNYLDSKKRMKPDLLSIGTGQTVLSAILFERTGYSNDQSIKNGSLAKLEMQQSNLGSCLAAN 569
BLAST of BraAnng002260.3.5C.1 vs. GenBank_protein
Match: KAG5374067.1 (hypothetical protein IGI04_042630, partial [Brassica rapa subsp. trilocularis]) HSP 1 Score: 407 bits (1047), Expect = 1.630e-132 Identity = 201/222 (90.54%), Postives = 204/222 (91.89%), Query Frame = 0 Query: 1 MLPTLSRIQQTGKRSKWPPDHQDIVNSAKHIGLAKFCELLISDWAGRLQIYLWKPGAYDSTLIILGECSARARTSLGNKELEADQNALLLDHVKVWKPPDFQKLQYHFRDCQIKSGDGDFIRENGEVITGAGGGLMFSSQIKEKPPDGLSLHQTSNKQTRGNYLDSKKRMKPDLLSIGTGQTVLSARISEKRGYSNDQSIKNGSLAKLDMQQSNLGSCLAAN 222 MLPTLS IQQTGK SKWPPDHQDIVNSAKHIGL KFCELLISDW GRLQIYLWKPGAYDSTLIILGECSARARTSLGNKELEADQNALLLDHVKVWKPPD QKLQYHFRDCQIKSGDGDFIR N EVITG GG LMFSSQ KEKPPDGLS HQ+ NK RGNYLDSKKRMKPDLLSIGTGQTVLSARI EKRGYSNDQSI+NG LAKL+MQQ NLGSCLA N Sbjct: 522 MLPTLSWIQQTGKHSKWPPDHQDIVNSAKHIGLVKFCELLISDWTGRLQIYLWKPGAYDSTLIILGECSARARTSLGNKELEADQNALLLDHVKVWKPPDLQKLQYHFRDCQIKSGDGDFIRVNSEVITGVGGKLMFSSQNKEKPPDGLSQHQSPNKSARGNYLDSKKRMKPDLLSIGTGQTVLSARIFEKRGYSNDQSIQNGYLAKLEMQQPNLGSCLATN 743
BLAST of BraAnng002260.3.5C.1 vs. GenBank_protein
Match: KAG5373602.1 (hypothetical protein IGI04_043080, partial [Brassica rapa subsp. trilocularis]) HSP 1 Score: 399 bits (1025), Expect = 2.370e-132 Identity = 199/222 (89.64%), Postives = 202/222 (90.99%), Query Frame = 0 Query: 1 MLPTLSRIQQTGKRSKWPPDHQDIVNSAKHIGLAKFCELLISDWAGRLQIYLWKPGAYDSTLIILGECSARARTSLGNKELEADQNALLLDHVKVWKPPDFQKLQYHFRDCQIKSGDGDFIRENGEVITGAGGGLMFSSQIKEKPPDGLSLHQTSNKQTRGNYLDSKKRMKPDLLSIGTGQTVLSARISEKRGYSNDQSIKNGSLAKLDMQQSNLGSCLAAN 222 MLPTLS IQQT KRSKWPPDHQDIVNSAKHIGL KFCELLISDW GRLQIYLWKPGAYDSTLIILGECSARARTSLGNKELE DQNALLLDHVKVWKPPD QKLQYHFRD Q KSGDGDF R NGEVITG GG LMFSSQIKEKPPDGLSLHQ+ NK TRGNYLDSKKRMKPDLLS GTGQTV+S RI EKRGYS DQSIK GSLAKL+MQ SNLGSCLAAN Sbjct: 277 MLPTLSWIQQTRKRSKWPPDHQDIVNSAKHIGLVKFCELLISDWTGRLQIYLWKPGAYDSTLIILGECSARARTSLGNKELEPDQNALLLDHVKVWKPPDLQKLQYHFRDYQTKSGDGDFTRLNGEVITGIGGELMFSSQIKEKPPDGLSLHQSPNKPTRGNYLDSKKRMKPDLLSTGTGQTVMSTRIFEKRGYSIDQSIKKGSLAKLEMQLSNLGSCLAAN 498
BLAST of BraAnng002260.3.5C.1 vs. GenBank_protein
Match: KAG5373808.1 (hypothetical protein IGI04_042863, partial [Brassica rapa subsp. trilocularis]) HSP 1 Score: 399 bits (1024), Expect = 3.180e-132 Identity = 198/222 (89.19%), Postives = 202/222 (90.99%), Query Frame = 0 Query: 1 MLPTLSRIQQTGKRSKWPPDHQDIVNSAKHIGLAKFCELLISDWAGRLQIYLWKPGAYDSTLIILGECSARARTSLGNKELEADQNALLLDHVKVWKPPDFQKLQYHFRDCQIKSGDGDFIRENGEVITGAGGGLMFSSQIKEKPPDGLSLHQTSNKQTRGNYLDSKKRMKPDLLSIGTGQTVLSARISEKRGYSNDQSIKNGSLAKLDMQQSNLGSCLAAN 222 ML TLS IQQT KRSKWPPDHQDI+NSAKHIGL KFCELLISDW GR+Q YLWK GAY S LIILGECSAR RTS GNKELEADQNALLLDHVKVWKPPD QKLQYHFRDCQ KSGDGDF R NGEVITG GG LMFSSQIKEKPPDGLSLHQ+ NK TRGNYLDSKKRMKPDLLSIGTGQTVLSARI EKRGYSNDQSIKNGSLAKL+MQQSNLGSCLAAN Sbjct: 270 MLHTLSWIQQTRKRSKWPPDHQDIINSAKHIGLVKFCELLISDWGGRIQFYLWKLGAYASILIILGECSARGRTSWGNKELEADQNALLLDHVKVWKPPDLQKLQYHFRDCQTKSGDGDFTRLNGEVITGIGGELMFSSQIKEKPPDGLSLHQSPNKPTRGNYLDSKKRMKPDLLSIGTGQTVLSARIFEKRGYSNDQSIKNGSLAKLEMQQSNLGSCLAAN 491
BLAST of BraAnng002260.3.5C.1 vs. GenBank_protein
Match: KAG5373829.1 (hypothetical protein IGI04_042853, partial [Brassica rapa subsp. trilocularis]) HSP 1 Score: 399 bits (1025), Expect = 3.940e-130 Identity = 199/222 (89.64%), Postives = 202/222 (90.99%), Query Frame = 0 Query: 1 MLPTLSRIQQTGKRSKWPPDHQDIVNSAKHIGLAKFCELLISDWAGRLQIYLWKPGAYDSTLIILGECSARARTSLGNKELEADQNALLLDHVKVWKPPDFQKLQYHFRDCQIKSGDGDFIRENGEVITGAGGGLMFSSQIKEKPPDGLSLHQTSNKQTRGNYLDSKKRMKPDLLSIGTGQTVLSARISEKRGYSNDQSIKNGSLAKLDMQQSNLGSCLAAN 222 MLPTLS IQQT KRSKWPPDHQDIVNSAKHIGL KFCELLISDW GRLQIYLWKPGAYDSTLIILGECSARARTSLGNKELE DQNALLLDHVKVWKPPD QKLQYHFRD Q KSGDGDF R NGEVITG GG LMFSSQIKEKPPDGLSLHQ+ NK TRGNYLDSKKRMKPDLLS GTGQTV+S RI EKRGYS DQSIK GSLAKL+MQ SNLGSCLAAN Sbjct: 460 MLPTLSWIQQTRKRSKWPPDHQDIVNSAKHIGLVKFCELLISDWTGRLQIYLWKPGAYDSTLIILGECSARARTSLGNKELEPDQNALLLDHVKVWKPPDLQKLQYHFRDYQTKSGDGDFTRLNGEVITGIGGELMFSSQIKEKPPDGLSLHQSPNKPTRGNYLDSKKRMKPDLLSTGTGQTVMSTRIFEKRGYSIDQSIKKGSLAKLEMQLSNLGSCLAAN 681
BLAST of BraAnng002260.3.5C.1 vs. GenBank_protein
Match: KAG5411328.1 (hypothetical protein IGI04_007647 [Brassica rapa subsp. trilocularis]) HSP 1 Score: 390 bits (1002), Expect = 1.920e-127 Identity = 194/222 (87.39%), Postives = 199/222 (89.64%), Query Frame = 0 Query: 1 MLPTLSRIQQTGKRSKWPPDHQDIVNSAKHIGLAKFCELLISDWAGRLQIYLWKPGAYDSTLIILGECSARARTSLGNKELEADQNALLLDHVKVWKPPDFQKLQYHFRDCQIKSGDGDFIRENGEVITGAGGGLMFSSQIKEKPPDGLSLHQTSNKQTRGNYLDSKKRMKPDLLSIGTGQTVLSARISEKRGYSNDQSIKNGSLAKLDMQQSNLGSCLAAN 222 MLPTLS I+QT KRSKWPPDHQDIVNSAKHIGLAKFCELLISDW GRLQ YLWKPGAY LIILGECSAR+RTS NKELEADQNALLLDHVKVWKPPD QKLQYHFRDCQ KSGDGDF R NGEVITG GG LMFSSQIKEKPPD LSLHQ+ NK TRGNYLDSKKRMKPDLLSIGTGQTV+S RI EKRGYS DQSIK GSLAKL+MQ SNLGSCLAAN Sbjct: 489 MLPTLSWIEQTRKRSKWPPDHQDIVNSAKHIGLAKFCELLISDWGGRLQFYLWKPGAYSRILIILGECSARSRTSWDNKELEADQNALLLDHVKVWKPPDLQKLQYHFRDCQTKSGDGDFTRLNGEVITGIGGELMFSSQIKEKPPDELSLHQSPNKPTRGNYLDSKKRMKPDLLSIGTGQTVMSTRIFEKRGYSIDQSIKKGSLAKLEMQLSNLGSCLAAN 710
BLAST of BraAnng002260.3.5C.1 vs. GenBank_protein
Match: KAG5373915.1 (hypothetical protein IGI04_042762 [Brassica rapa subsp. trilocularis]) HSP 1 Score: 381 bits (979), Expect = 1.540e-125 Identity = 187/222 (84.23%), Postives = 199/222 (89.64%), Query Frame = 0 Query: 1 MLPTLSRIQQTGKRSKWPPDHQDIVNSAKHIGLAKFCELLISDWAGRLQIYLWKPGAYDSTLIILGECSARARTSLGNKELEADQNALLLDHVKVWKPPDFQKLQYHFRDCQIKSGDGDFIRENGEVITGAGGGLMFSSQIKEKPPDGLSLHQTSNKQTRGNYLDSKKRMKPDLLSIGTGQTVLSARISEKRGYSNDQSIKNGSLAKLDMQQSNLGSCLAAN 222 MLPTLS IQQT KRSKWPPDHQDIVNSAKHIGLAKFCELLISDW GRLQ YLWKPG+Y LIILGECSAR+RTS GNKELEADQN+LLL HVK+WKPPD Q+LQ+H++D Q SGDG F ENGEVITG GG MFSSQIKEKPPDGLSLHQ+ NK TRGNYLDSKKRMKPDLLSIGTGQTVLSA + E+RGYSNDQSIKNGSLAKL+MQQSNLGSCLAAN Sbjct: 263 MLPTLSWIQQTRKRSKWPPDHQDIVNSAKHIGLAKFCELLISDWGGRLQFYLWKPGSYSRILIILGECSARSRTSWGNKELEADQNSLLLGHVKIWKPPDMQQLQHHYKDYQTMSGDGGFTGENGEVITGIGGEFMFSSQIKEKPPDGLSLHQSPNKPTRGNYLDSKKRMKPDLLSIGTGQTVLSAILFERRGYSNDQSIKNGSLAKLEMQQSNLGSCLAAN 484
BLAST of BraAnng002260.3.5C.1 vs. GenBank_protein
Match: XP_033139121.1 (uncharacterized protein LOC117130236 [Brassica rapa]) HSP 1 Score: 373 bits (957), Expect = 6.990e-121 Identity = 190/222 (85.59%), Postives = 192/222 (86.49%), Query Frame = 0 Query: 1 MLPTLSRIQQTGKRSKWPPDHQDIVNSAKHIGLAKFCELLISDWAGRLQIYLWKPGAYDSTLIILGECSARARTSLGNKELEADQNALLLDHVKVWKPPDFQKLQYHFRDCQIKSGDGDFIRENGEVITGAGGGLMFSSQIKEKPPDGLSLHQTSNKQTRGNYLDSKKRMKPDLLSIGTGQTVLSARISEKRGYSNDQSIKNGSLAKLDMQQSNLGSCLAAN 222 MLPTLS IQQTGKRSKWPPDHQDIVNSAKHIGLAKFCELLISDWAGRLQIYLWKPGAYDSTLIILGECSARARTSLGNKELEADQNALLLDHVKVWKPPD QKLQYHFRDCQIKSGDGDFIR NGEVITG GG LMFSSQ KEKPPDGLSLHQ+ NK RG QTVLSARI EKRGYSNDQSIKNG LAKL+MQQSNLGSCLAAN Sbjct: 411 MLPTLSWIQQTGKRSKWPPDHQDIVNSAKHIGLAKFCELLISDWAGRLQIYLWKPGAYDSTLIILGECSARARTSLGNKELEADQNALLLDHVKVWKPPDLQKLQYHFRDCQIKSGDGDFIRVNGEVITGVGGKLMFSSQNKEKPPDGLSLHQSPNKSARG-------------------QTVLSARIFEKRGYSNDQSIKNGYLAKLEMQQSNLGSCLAAN 613 The following BLAST results are available for this feature:
BLAST of BraAnng002260.3.5C.1 vs. GenBank_protein
Analysis Date: 2022-02-26 (Diamond on OGS3.5 vs NR) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BraAnng002260.3.5C.1-P1 ID=BraAnng002260.3.5C.1-P1|Name=BraAnng002260.3.5C.1|organism=Brassica rapa chifu|type=polypeptide|length=225bpback to top |