BraAnng003200.3.5C.1-P1 (polypeptide) Brassica rapa chifu
You are viewing a polypeptide, more information available on the corresponding mRNA page
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Overview
Homology
BLAST of BraAnng003200.3.5C.1 vs. GenBank_protein
Match: KAG5383813.1 (hypothetical protein IGI04_035283 [Brassica rapa subsp. trilocularis] >KAG5383816.1 hypothetical protein IGI04_035286 [Brassica rapa subsp. trilocularis] >KAG5385227.1 hypothetical protein IGI04_036697 [Brassica rapa subsp. trilocularis]) HSP 1 Score: 305 bits (782), Expect = 3.800e-103 Identity = 146/162 (90.12%), Postives = 147/162 (90.74%), Query Frame = 0 Query: 19 SFWGDGGIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGAGLKKDLRVSREEGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK 180
S+ GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGA EGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK
Sbjct: 73 SYLSSAGIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGA-----------EGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK 223
BLAST of BraAnng003200.3.5C.1 vs. GenBank_protein
Match: CDY19669.1 (BnaC09g29250D [Brassica napus] >VDD22540.1 unnamed protein product [Brassica rapa]) HSP 1 Score: 303 bits (777), Expect = 8.320e-102 Identity = 145/156 (92.95%), Postives = 145/156 (92.95%), Query Frame = 0 Query: 25 GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGAGLKKDLRVSREEGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK 180
GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGA EGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK
Sbjct: 81 GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGA-----------EGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK 225
BLAST of BraAnng003200.3.5C.1 vs. GenBank_protein
Match: VDD65269.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 303 bits (777), Expect = 8.320e-102 Identity = 145/156 (92.95%), Postives = 145/156 (92.95%), Query Frame = 0 Query: 25 GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGAGLKKDLRVSREEGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK 180
GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGA EGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK
Sbjct: 81 GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGA-----------EGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK 225
BLAST of BraAnng003200.3.5C.1 vs. GenBank_protein
Match: CDY63597.1 (BnaUnng00850D [Brassica napus]) HSP 1 Score: 303 bits (777), Expect = 9.860e-102 Identity = 145/156 (92.95%), Postives = 145/156 (92.95%), Query Frame = 0 Query: 25 GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGAGLKKDLRVSREEGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK 180
GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGA EGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK
Sbjct: 86 GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGA-----------EGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK 230
BLAST of BraAnng003200.3.5C.1 vs. GenBank_protein
Match: VDD22498.1 (unnamed protein product [Brassica rapa] >VDD25486.1 unnamed protein product [Brassica rapa] >VDD65329.1 unnamed protein product [Brassica oleracea] >VDD65740.1 unnamed protein product [Brassica oleracea]) HSP 1 Score: 303 bits (777), Expect = 1.130e-101 Identity = 145/156 (92.95%), Postives = 145/156 (92.95%), Query Frame = 0 Query: 25 GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGAGLKKDLRVSREEGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK 180
GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGA EGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK
Sbjct: 90 GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGA-----------EGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK 234
BLAST of BraAnng003200.3.5C.1 vs. GenBank_protein
Match: KAG5385221.1 (hypothetical protein IGI04_036691 [Brassica rapa subsp. trilocularis]) HSP 1 Score: 301 bits (772), Expect = 1.360e-101 Identity = 144/156 (92.31%), Postives = 144/156 (92.31%), Query Frame = 0 Query: 25 GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGAGLKKDLRVSREEGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK 180
GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGA EGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDI QLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK
Sbjct: 81 GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGA-----------EGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIPQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK 225
BLAST of BraAnng003200.3.5C.1 vs. GenBank_protein
Match: VDD65692.1 (unnamed protein product, partial [Brassica oleracea]) HSP 1 Score: 300 bits (768), Expect = 5.330e-101 Identity = 143/154 (92.86%), Postives = 143/154 (92.86%), Query Frame = 0 Query: 25 GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGAGLKKDLRVSREEGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTF 178
GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGA EGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTF
Sbjct: 81 GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGA-----------EGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTF 223
BLAST of BraAnng003200.3.5C.1 vs. GenBank_protein
Match: VDD65454.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 276 bits (706), Expect = 5.050e-91 Identity = 135/163 (82.82%), Postives = 139/163 (85.28%), Query Frame = 0 Query: 19 SFWGDGGIVPFEP-FFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGAGLKKDLRVSREEGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK 180
S+ G+ + F F +GLEKAAINRIFLILPSRKEEREILFPFRLEMGA EGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK
Sbjct: 73 SYLSSAGLGSYRSSLFSCFSQGLEKAAINRIFLILPSRKEEREILFPFRLEMGA-----------EGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK 224
BLAST of BraAnng003200.3.5C.1 vs. GenBank_protein
Match: VDD65397.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 219 bits (559), Expect = 2.280e-70 Identity = 103/112 (91.96%), Postives = 104/112 (92.86%), Query Frame = 0 Query: 69 MGAGLKKDLRVSREEGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK 180
MGAGLK+ L GNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK
Sbjct: 1 MGAGLKRILE------GNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDIAQLVELRSCNWVVAITGWVSNCPGGNDSILYLNRWLTFSK 106
BLAST of BraAnng003200.3.5C.1 vs. GenBank_protein
Match: VDD25644.1 (unnamed protein product [Brassica rapa] >VDD65486.1 unnamed protein product [Brassica oleracea]) HSP 1 Score: 215 bits (548), Expect = 1.100e-67 Identity = 107/136 (78.68%), Postives = 113/136 (83.09%), Query Frame = 0 Query: 25 GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGAGLKKDLRVSREEGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGDI-----AQLVELRSCNWVVAI 155
GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGA EGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARG A L++L C++ + +
Sbjct: 90 GIVPFEPFFHAFPRGLEKAAINRIFLILPSRKEEREILFPFRLEMGA-----------EGGNKHTWRAQYNGELCDDLLHGRGLWFKSRMAQLRQGKEYKKDLTPSCMLHLARGGYSSVGRAPLLQLGRCDYGLGV 214 The following BLAST results are available for this feature:
BLAST of BraAnng003200.3.5C.1 vs. GenBank_protein
Analysis Date: 2022-02-26 (Diamond on OGS3.5 vs NR) Total hits: 20 ZOOMx 1POSITION0
Pagesback to topInterPro
Analysis Name: InterProScan on OGS3.5
Date Performed: 2022-02-26 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BraAnng003200.3.5C.1-P1 ID=BraAnng003200.3.5C.1-P1|Name=BraAnng003200.3.5C.1|organism=Brassica rapa chifu|type=polypeptide|length=181bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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