BraAnng003140.3.5C.1-P1 (polypeptide) Brassica rapa chifu
You are viewing a polypeptide, more information available on the corresponding mRNA page
Overview
Homology
BLAST of BraAnng003140.3.5C.1 vs. GenBank_protein
Match: XP_033139113.1 (tol-Pal system protein TolA-like [Brassica rapa] >XP_033139266.1 tol-Pal system protein TolA-like [Brassica rapa]) HSP 1 Score: 266 bits (679), Expect = 3.140e-85 Identity = 202/223 (90.58%), Postives = 202/223 (90.58%), Query Frame = 0 Query: 1 MDFESRTGQIEGPTNPIGGPSNNAQSGQVHAYSVEATGATLGAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEEEVKSLRLSVPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVEDAILDISKD----------------RSRKDDGKEAVPVKKVKVDRGDTVRSPIQLRSRAAEKSS 207 MDFESRTGQIEGPTNPIGGPSNNAQSGQVHAYSVEATGATLGAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEEEVKSLRLSVPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AILDISKD SRKDDGKEAVPVKKVKVDRGDTVRSPIQLRSRAAEKSS Sbjct: 1 MDFESRTGQIEGPTNPIGGPSNNAQSGQVHAYSVEATGATLGAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEEEVKSLRLSVPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAILDISKDVQREYGDVDMDDDDAEMSRKDDGKEAVPVKKVKVDRGDTVRSPIQLRSRAAEKSS 223
BLAST of BraAnng003140.3.5C.1 vs. GenBank_protein
Match: XP_033138910.1 (tol-Pal system protein TolA-like [Brassica rapa]) HSP 1 Score: 263 bits (672), Expect = 5.310e-84 Identity = 201/223 (90.13%), Postives = 201/223 (90.13%), Query Frame = 0 Query: 1 MDFESRTGQIEGPTNPIGGPSNNAQSGQVHAYSVEATGATLGAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEEEVKSLRLSVPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVEDAILDISKD----------------RSRKDDGKEAVPVKKVKVDRGDTVRSPIQLRSRAAEKSS 207 MDFESRTGQIEGPTNPIGGPSNNAQSGQVHAYSVEATGAT GAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEEEVKSLRLSVPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AILDISKD SRKDDGKEAVPVKKVKVDRGDTVRSPIQLRSRAAEKSS Sbjct: 1 MDFESRTGQIEGPTNPIGGPSNNAQSGQVHAYSVEATGATPGAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEEEVKSLRLSVPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAILDISKDVQREYGDVDMDDDDAEMSRKDDGKEAVPVKKVKVDRGDTVRSPIQLRSRAAEKSS 223
BLAST of BraAnng003140.3.5C.1 vs. GenBank_protein
Match: RID40701.1 (hypothetical protein BRARA_J00732 [Brassica rapa]) HSP 1 Score: 251 bits (642), Expect = 8.030e-78 Identity = 198/248 (79.84%), Postives = 201/248 (81.05%), Query Frame = 0 Query: 1 MDFESRTGQIEGPTNPIGGPSNNAQSGQVHAYSVEATGATLGAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEEEVKSLRLSVPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVEDAILDISKD-----------------------------------------RSRKDDGKEAVPVKKVKVDRGDTVRSPIQLRSRAAEKSS 207 MDFESRTGQIEGPTNPIGGPSNNAQSGQ HA SVEAT AT GAEALKAMEGRLMNAVRDAV XAMKGVKEKVTSLSTQLGLLEEEVKSLRLSVPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VEDAILDISKD RSRKDDGKEA+PVKKVKVDRGDTVRSPIQL+SRAAEKS+ Sbjct: 97 MDFESRTGQIEGPTNPIGGPSNNAQSGQAHADSVEATRATPGAEALKAMEGRLMNAVRDAVRXAMKGVKEKVTSLSTQLGLLEEEVKSLRLSVPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDAILDISKDVQREYGDVDMDDDDAEMYAHAVEAEKKLKTKAAESVNTKKKRSRKDDGKEAIPVKKVKVDRGDTVRSPIQLKSRAAEKST 344
BLAST of BraAnng003140.3.5C.1 vs. GenBank_protein
Match: XP_013713365.1 (uncharacterized protein At3g43530-like [Brassica napus]) HSP 1 Score: 246 bits (629), Expect = 7.360e-75 Identity = 183/221 (82.81%), Postives = 183/221 (82.81%), Query Frame = 0 Query: 1 MDFESRTGQIEGPTNPIGGPSNNAQSGQVHAYSVEATGATLGAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEEEVKSLRLSVPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVEDAILDISKD----------------RSRKDDGKEAVPVKKVKVDRGDTVRSPIQLRSRAAEK 205 MDFESRTGQIEGPTNPIGGPSNNAQSGQ HA SVEATGAT GAEALKAMEGRLMNA RDAV AMKGVKEKVTSLSTQLGLLEEEVKSLR SVPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DAILDISKD SRKDDGKEAVPVKKVKVDRGD VRSPIQLRSRAAEK Sbjct: 226 MDFESRTGQIEGPTNPIGGPSNNAQSGQAHADSVEATGATPGAEALKAMEGRLMNADRDAVRDAMKGVKEKVTSLSTQLGLLEEEVKSLRWSVPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------XXDAILDISKDVQREYGDVDMDDDDAEMSRKDDGKEAVPVKKVKVDRGDNVRSPIQLRSRAAEK 435
BLAST of BraAnng003140.3.5C.1 vs. GenBank_protein
Match: XP_033146246.1 (uncharacterized protein At3g43530-like [Brassica rapa]) HSP 1 Score: 242 bits (617), Expect = 1.030e-72 Identity = 186/246 (75.61%), Postives = 189/246 (76.83%), Query Frame = 0 Query: 1 MDFESRTGQIEGPTNPIGGPSNNAQSGQVHAYSVEATGATLGAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEEEVKSLRLSVPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVEDAILDISKD-----------------------------------------RSRKDDGKEAVPVKKVKVDRGDTVRSPIQLRSRAAEK 205 MDFESRTGQIEGPTNPIGGPSNNAQSGQ HA SVEATGAT GAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEE+VKSLRLS PGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VEDAI+DISKD RSRKDDGKEAVPVKKVKVDRGD VRSPIQLRS+AAEK Sbjct: 226 MDFESRTGQIEGPTNPIGGPSNNAQSGQAHADSVEATGATPGAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEEKVKSLRLSGPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------VEDAIVDISKDVHREYGDVDMDDDDAEMYAHAVEAEKKLKTKAAESVNTKKKRSRKDDGKEAVPVKKVKVDRGDNVRSPIQLRSKAAEK 460
BLAST of BraAnng003140.3.5C.1 vs. GenBank_protein
Match: XP_013713363.1 (uncharacterized protein LOC106417044 [Brassica napus]) HSP 1 Score: 229 bits (585), Expect = 1.990e-70 Identity = 185/250 (74.00%), Postives = 189/250 (75.60%), Query Frame = 0 Query: 1 MDFESRTGQIEGPTNPIGGPSNNAQSGQVHAYSVEATGATLGAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEEEVKSLRLSVPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--VEDAILDISKD-----------------------------------------RSRKDDGKEAVPVKKVKVDRGDTVRSPIQLRSRAAEKSS 207 MDFESRTGQIEGPTNPIG NNAQSGQ HA SVEATGAT GAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEEEVKSLRLSVPGSDNPAVQDDGDGSDNSESEE XXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXX VED ILDISKD RSRKDD KEAVPVKKVKVDRGD V++PIQLRSRAAE+ + Sbjct: 1 MDFESRTGQIEGPTNPIGXXXNNAQSGQAHADSVEATGATPGAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEEEVKSLRLSVPGSDNPAVQDDGDGSDNSESEEXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGDNNXXXXXXXXXXXVEDTILDISKDVQREYGDVDMDDDDAEMYAHAVEAEKKIKTKAAESVNTKKMRSRKDDDKEAVPVKKVKVDRGDNVKNPIQLRSRAAEEKT 250
BLAST of BraAnng003140.3.5C.1 vs. GenBank_protein
Match: KAG5384598.1 (hypothetical protein IGI04_036068 [Brassica rapa subsp. trilocularis]) HSP 1 Score: 233 bits (593), Expect = 4.790e-70 Identity = 182/242 (75.21%), Postives = 185/242 (76.45%), Query Frame = 0 Query: 5 SRTGQIEGPTNPIGGPSNNAQSGQVHAYSVEATGATLGAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEEEVKSLRLSVPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVEDAILDISKD-----------------------------------------RSRKDDGKEAVPVKKVKVDRGDTVRSPIQLRSRAAEK 205 SRTGQIEGPTNPIGGPSNNAQSGQ HA SVEATGAT GAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEE+VKSLRLS PGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VEDAI+DISKD RSRKDDGKEAVPVKKVKVDRGD VRSPIQLRS+AAEK Sbjct: 139 SRTGQIEGPTNPIGGPSNNAQSGQAHADSVEATGATPGAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEEKVKSLRLSGPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------VEDAIVDISKDVHREYGDVDMDDDDAEMYAHAVEAEKKLKTKAAESVNTKKKRSRKDDGKEAVPVKKVKVDRGDNVRSPIQLRSKAAEK 369
BLAST of BraAnng003140.3.5C.1 vs. GenBank_protein
Match: KAG5400157.1 (hypothetical protein IGI04_014764, partial [Brassica rapa subsp. trilocularis]) HSP 1 Score: 228 bits (582), Expect = 6.750e-70 Identity = 162/200 (81.00%), Postives = 168/200 (84.00%), Query Frame = 0 Query: 6 RTGQIEGPTNPIGGPSNNAQSGQVHAYSVEATGATLGAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEEEVKSLRLSVPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVEDAILDISKDRSRKDDGKEAVPVKKVKVDRGDTVRSPIQLRSRAAEK 205 + GQIEGPTNPIGGPSNNAQSGQ HA SVEATGAT GAEALKAMEGRLMNAVRDAV AMKGVKEKVTSL TQLGLLEEEVKSLR SVPGSDNPAVQDDGDGSDNSESEE XXXXXXXXXXXXXXXXXXXXXXXXX +++ + K RSRKDDGKEAVPVKKVKVDRGD VRSPIQ+RSRAAEK Sbjct: 45 KLGQIEGPTNPIGGPSNNAQSGQAHADSVEATGATPGAEALKAMEGRLMNAVRDAVRDAMKGVKEKVTSLFTQLGLLEEEVKSLRWSVPGSDNPAVQDDGDGSDNSESEEXXXXXXXXXXXXXXXXXXXXXXXXXXEMYAHAVEAEKKLKTKAAESV-NTKKKRSRKDDGKEAVPVKKVKVDRGDNVRSPIQVRSRAAEK 243
BLAST of BraAnng003140.3.5C.1 vs. GenBank_protein
Match: XP_018480084.1 (PREDICTED: uncharacterized protein At3g43530-like [Raphanus sativus]) HSP 1 Score: 227 bits (578), Expect = 1.340e-67 Identity = 176/219 (80.37%), Postives = 184/219 (84.02%), Query Frame = 0 Query: 1 MDFESRTGQIEGPTNPIGGPSNNAQSGQVHAYSVEATGATLGAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEEEVKSLRLSVPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVEDAILDISKD----------------RSRKDDGKEAVPVKKVKVDRGDTVRSPIQLRSRAA 203 MDFESRTGQIEGPTNPIGGPSNNAQSGQ +A SVE +GAT GAEALKAMEGRLMNAVRDAV AMKGVKEKVT LSTQLGLLEE+VKSLRLSVPGSDNPAVQDDGDGSDN+ESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +VEDAILDISKD SRKDDGKE VPVKK K+ +TVRSPIQLRS+AA Sbjct: 208 MDFESRTGQIEGPTNPIGGPSNNAQSGQANADSVEFSGATPGAEALKAMEGRLMNAVRDAVRDAMKGVKEKVTLLSTQLGLLEEDVKSLRLSVPGSDNPAVQDDGDGSDNNESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN-----NVEDAILDISKDVQREYGDVDMDDDDAEMSRKDDGKETVPVKKAKLMLRETVRSPIQLRSKAA 421
BLAST of BraAnng003140.3.5C.1 vs. GenBank_protein
Match: KAG5400652.1 (hypothetical protein IGI04_015259 [Brassica rapa subsp. trilocularis]) HSP 1 Score: 225 bits (574), Expect = 3.290e-67 Identity = 178/238 (74.79%), Postives = 181/238 (76.05%), Query Frame = 0 Query: 9 QIEGPTNPIGGPSNNAQSGQVHAYSVEATGATLGAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEEEVKSLRLSVPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVEDAILDISKD-----------------------------------------RSRKDDGKEAVPVKKVKVDRGDTVRSPIQLRSRAAEK 205 QIEGPTNPIGGPSNNAQSGQ HA SVEATGAT GAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEE+VKSLRLS PGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VEDAI+DISKD RSRKDDGKEAVPVKKVKVDRGD VRSPIQLRS+AAEK Sbjct: 143 QIEGPTNPIGGPSNNAQSGQAHADSVEATGATPGAEALKAMEGRLMNAVRDAVXXAMKGVKEKVTSLSTQLGLLEEKVKSLRLSGPGSDNPAVQDDGDGSDNSESEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------VEDAIVDISKDVHREYGDVDMDDDDAEMYAHAVEAEKKLKTKAAESVNTKKKRSRKDDGKEAVPVKKVKVDRGDNVRSPIQLRSKAAEK 369 The following BLAST results are available for this feature:
BLAST of BraAnng003140.3.5C.1 vs. GenBank_protein
Analysis Date: 2022-02-26 (Diamond on OGS3.5 vs NR) Total hits: 20 ZOOMx 1POSITION0
Pagesback to topInterPro
Analysis Name: InterProScan on OGS3.5
Date Performed: 2022-02-26 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BraAnng003140.3.5C.1-P1 ID=BraAnng003140.3.5C.1-P1|Name=BraAnng003140.3.5C.1|organism=Brassica rapa chifu|type=polypeptide|length=266bpback to top |