BolSC47t61101H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameBolSC47t61101H-R
Unique NameBolSC47t61101H-R-P
Typepolypeptide
OrganismBrassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length521
Homology
BLAST of BolSC47t61101H-R vs. GenBank_protein
Match: VDD65873.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 987 bits (2552), Expect = 0.000e+0
Identity = 520/520 (100.00%), Postives = 520/520 (100.00%), Query Frame = 0
Query:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520
            MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI
Sbjct:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520          
BLAST of BolSC47t61101H-R vs. GenBank_protein
Match: XP_013684709.1 (uncharacterized protein LOC106389069 [Brassica napus] >XP_022555204.1 uncharacterized protein LOC111204518 [Brassica napus] >XP_022557179.1 uncharacterized protein LOC111205510 [Brassica napus] >XP_022566913.1 uncharacterized protein LOC111210647 [Brassica napus] >XP_022566914.1 uncharacterized protein LOC111210649 [Brassica napus] >XP_022566917.1 uncharacterized protein LOC111210653 [Brassica napus] >XP_033129023.1 ATP synthase subunit beta, chloroplastic [Brassica rapa] >XP_033138924.1 ATP synthase subunit beta, chloroplastic [Brassica rapa])

HSP 1 Score: 987 bits (2552), Expect = 0.000e+0
Identity = 520/520 (100.00%), Postives = 520/520 (100.00%), Query Frame = 0
Query:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520
            MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI
Sbjct:   89 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 608          
BLAST of BolSC47t61101H-R vs. GenBank_protein
Match: XP_013743400.1 (uncharacterized protein LOC106446249 [Brassica napus])

HSP 1 Score: 986 bits (2549), Expect = 0.000e+0
Identity = 519/520 (99.81%), Postives = 520/520 (100.00%), Query Frame = 0
Query:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520
            MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAE+FTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI
Sbjct:   89 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAELFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 608          
BLAST of BolSC47t61101H-R vs. GenBank_protein
Match: QCE06959.1 (F-type H+-transporting ATPase subunit beta [Vigna unguiculata])

HSP 1 Score: 973 bits (2515), Expect = 0.000e+0
Identity = 513/520 (98.65%), Postives = 515/520 (99.04%), Query Frame = 0
Query:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520
            MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDT TTSPIHKSAPAFI LDT LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINE NLA+SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG+LQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGF LILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI
Sbjct:   89 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 608          
BLAST of BolSC47t61101H-R vs. GenBank_protein
Match: EFH63135.1 (H+-transporting two-sector ATPase, alpha/beta subunit, central region [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 965 bits (2495), Expect = 0.000e+0
Identity = 510/520 (98.08%), Postives = 512/520 (98.46%), Query Frame = 0
Query:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520
            MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDT TTSPIHKSAPAFI LDT LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINE NLA+SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG+LQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGF LILSGEFDSLPEQAFYLVGNIDEAT KATNLEMEKVKEIILSTNSGQIGVLPNHA IATAVDIGILKIRL NQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI
Sbjct:   89 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGEFDSLPEQAFYLVGNIDEATVKATNLEMEKVKEIILSTNSGQIGVLPNHALIATAVDIGILKIRLTNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 608          
BLAST of BolSC47t61101H-R vs. GenBank_protein
Match: XP_040966350.1 (ATP synthase subunit beta, chloroplastic-like [Gossypium hirsutum])

HSP 1 Score: 946 bits (2444), Expect = 0.000e+0
Identity = 498/520 (95.77%), Postives = 507/520 (97.50%), Query Frame = 0
Query:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520
            M+V+D G  LSVPVGGATLGRIFNVLGEPVDNLGPVDT TTSPIHKSAPAFI LDT LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINE NLA+SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG+LQERITSTK+GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQ+VKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGF LILSGE D LPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGIL+IRLN+QWLTMALMGGFARIGNNEITILVNDAEK SDIDPQEAQQ LEIAEANLRKAEGKRQTIEANLALRRARTRVEA+N I
Sbjct:   89 MEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQWLTMALMGGFARIGNNEITILVNDAEKGSDIDPQEAQQALEIAEANLRKAEGKRQTIEANLALRRARTRVEAINAI 608          
BLAST of BolSC47t61101H-R vs. GenBank_protein
Match: XP_035835881.1 (ATP synthase subunit beta, chloroplastic [Helianthus annuus])

HSP 1 Score: 941 bits (2433), Expect = 0.000e+0
Identity = 493/520 (94.81%), Postives = 506/520 (97.31%), Query Frame = 0
Query:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520
            MDV+D G PLSVPVGGATLGRIFNVLGEP+DNLGPVD  TT PIH+SAPAFI LDT LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINE N+A+SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLF+DNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTK+GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG+EHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGF LILSGE D LPEQAFYLVGNIDEATAKA NLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGIL+IRLN+QWLTMALMGGFARIGNNEIT+LVNDAEK+SDIDPQEAQQTLEIAEA LRKAEGKRQTIEANLALRRARTRVEA+N I
Sbjct:   89 MDVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDNSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLILSGELDGLPEQAFYLVGNIDEATAKAMNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQWLTMALMGGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEAALRKAEGKRQTIEANLALRRARTRVEAINAI 608          
BLAST of BolSC47t61101H-R vs. GenBank_protein
Match: XP_028106663.1 (uncharacterized protein LOC114305725 [Camellia sinensis])

HSP 1 Score: 940 bits (2429), Expect = 0.000e+0
Identity = 493/520 (94.81%), Postives = 507/520 (97.50%), Query Frame = 0
Query:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520
            M+V+D   PLSVPVGGATLGRIFNVLGEPVDNLGPVDT TTSPIH+SAPAFI LDT LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINE N+A+SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG+LQERITSTK+GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQ+VKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGF LILSGE D LPEQAFYLVGNIDEATAKA NLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGIL+IRLN+QWLTMALMGGFARIGNNEIT+LVNDAEK+SDIDPQEAQQTLEIAEANL+KAEGKRQ IEANLALRRARTRVEA+N I
Sbjct:   50 MEVIDTEAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLILSGELDGLPEQAFYLVGNIDEATAKAMNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQWLTMALMGGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLKKAEGKRQIIEANLALRRARTRVEAINVI 569          
BLAST of BolSC47t61101H-R vs. GenBank_protein
Match: XP_029152632.1 (uncharacterized protein LOC114927092 [Arachis hypogaea])

HSP 1 Score: 932 bits (2409), Expect = 0.000e+0
Identity = 487/520 (93.65%), Postives = 506/520 (97.31%), Query Frame = 0
Query:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520
            M+V+D G PLSVPVGGATLGRIFNVLGEP+DNLGPVDT TTSPIH+SAPAFI LDT LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINE  + +SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTK+GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQ+VKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGF LILSGE D LPEQAFYLVGNIDEATAKATNLEME+VKEIILSTNSGQIGVLPNHAPIATAVDIGIL+IRLN+QW+TMALMGGFARIGNN+ITILVNDAEK+SDIDP+EA+QTLEIAEANL KAEGKRQ IEANL+LRRARTRVEA+N +
Sbjct:   89 MEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKTIGESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEATAKATNLEMEEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQWVTMALMGGFARIGNNKITILVNDAEKSSDIDPEEAKQTLEIAEANLSKAEGKRQLIEANLSLRRARTRVEAINML 608          
BLAST of BolSC47t61101H-R vs. GenBank_protein
Match: XP_034226077.1 (ATP synthase subunit beta, chloroplastic [Prunus dulcis])

HSP 1 Score: 932 bits (2408), Expect = 0.000e+0
Identity = 487/520 (93.65%), Postives = 505/520 (97.12%), Query Frame = 0
Query:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520
            M+V+D G PLSVPVGGATLGRIFNVLGEPVD+LGPVDT TTSPIH+SAPAFI LDT LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINE N+A+SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG+LQERITSTK+GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQ+VK+TLQRYKELQDIIAILGLDELSE+DRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGF LILSGE D LPEQAFYLVGNIDEATAKAT L   +VKEIILSTNSGQIGVLPNHAP+ATAVDIGIL+IRLN+QWLTMALMGGFARIGNNEIT+LVNDAEK SDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEA+N +
Sbjct:   89 MEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEDDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEATAKATTLGTSEVKEIILSTNSGQIGVLPNHAPVATAVDIGILRIRLNDQWLTMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEAINVM 608          
The following BLAST results are available for this feature:
BLAST of BolSC47t61101H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20
Match NameE-valueIdentityDescription
VDD65873.10.000e+0100.00unnamed protein product [Brassica oleracea][more]
XP_013684709.10.000e+0100.00uncharacterized protein LOC106389069 [Brassica nap... [more]
XP_013743400.10.000e+099.81uncharacterized protein LOC106446249 [Brassica nap... [more]
QCE06959.10.000e+098.65F-type H+-transporting ATPase subunit beta [Vigna ... [more]
EFH63135.10.000e+098.08H+-transporting two-sector ATPase, alpha/beta subu... [more]
XP_040966350.10.000e+095.77ATP synthase subunit beta, chloroplastic-like [Gos... [more]
XP_035835881.10.000e+094.81ATP synthase subunit beta, chloroplastic [Helianth... [more]
XP_028106663.10.000e+094.81uncharacterized protein LOC114305725 [Camellia sin... [more]
XP_029152632.10.000e+093.65uncharacterized protein LOC114927092 [Arachis hypo... [more]
XP_034226077.10.000e+093.65ATP synthase subunit beta, chloroplastic [Prunus d... [more]

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GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0042776 mitochondrial ATP synthesis coupled proton transport
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005753 mitochondrial proton-transporting ATP synthase complex
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function GO:0005524 ATP binding
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 484..504
NoneNo IPR availableGENE3D6.10.140.480coord: 477..520
e-value: 4.9E-24
score: 85.6
NoneNo IPR availablePANTHERPTHR15184:SF65F0F1-TYPE ATP SYNTHASE, BETA SUBUNITcoord: 1..406
NoneNo IPR availablePANTHERPTHR15184ATP SYNTHASEcoord: 1..406
NoneNo IPR availableCDDcd01133F1-ATPase_betacoord: 9..289
e-value: 0.0
score: 566.087
NoneNo IPR availableCDDcd18110ATP-synt_F1_beta_Ccoord: 291..398
e-value: 3.99061E-77
score: 235.835
NoneNo IPR availableSUPERFAMILY47917C-terminal domain of alpha and beta subunits of F1 ATP synthasecoord: 287..402
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 76..268
e-value: 4.9E-9
score: 46.0
IPR036771F0F1 ATP synthase delta/epsilon subunit, N-terminalGENE3D2.60.15.10coord: 399..476
e-value: 1.0E-18
score: 69.2
IPR036771F0F1 ATP synthase delta/epsilon subunit, N-terminalSUPERFAMILY51344Epsilon subunit of F1F0-ATP synthase N-terminal domaincoord: 405..470
IPR020547ATP synthase delta/epsilon subunit, C-terminal domainPFAMPF00401ATP-synt_DEcoord: 474..516
e-value: 3.6E-6
score: 27.2
IPR024034ATPase, F1/V1 complex, beta/alpha subunit, C-terminalGENE3D1.10.1140.10coord: 287..398
e-value: 1.4E-58
score: 197.6
IPR001469ATP synthase, F1 complex, delta/epsilon subunitTIGRFAMTIGR01216TIGR01216coord: 405..518
e-value: 2.7E-33
score: 112.7
IPR001469ATP synthase, F1 complex, delta/epsilon subunitHAMAPMF_00530ATP_synth_epsil_baccoord: 388..516
score: 19.64151
IPR001469ATP synthase, F1 complex, delta/epsilon subunitCDDcd12152F1-ATPase_deltacoord: 405..511
e-value: 1.24129E-29
score: 110.679
IPR005722ATP synthase, F1 complex, beta subunitTIGRFAMTIGR01039TIGR01039coord: 1..402
e-value: 6.5E-225
score: 745.1
IPR005722ATP synthase, F1 complex, beta subunitHAMAPMF_01347ATP_synth_beta_bactcoord: 1..402
score: 48.596596
IPR020546ATP synthase, F1 complex, delta/epsilon subunit, N-terminalPFAMPF02823ATP-synt_DE_Ncoord: 405..469
e-value: 2.9E-18
score: 65.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 10..286
e-value: 1.2E-117
score: 394.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..289
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainPFAMPF00006ATP-synt_abcoord: 64..284
e-value: 3.4E-64
score: 216.4
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active sitePROSITEPS00152ATPASE_ALPHA_BETAcoord: 275..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Boleracea_scaffold_47contigBoleracea_scaffold_47:117070..118697 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Interproscan on OGS1.02022-03-19
Blast2go on OGS1.02022-03-19
Diamond on OGS1.0 vs NR2022-03-19
Brassica oleracea HDEM OGS1.02018-11-02
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
BolSC47t61101H-RBolSC47t61101H-RBrassica oleracea HDEMmRNABoleracea_scaffold_47 117070..118697 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>BolSC47t61101H-R-P ID=BolSC47t61101H-R-P|Name=BolSC47t61101H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=521bp
MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPA
FIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN
IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQ
MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL
LGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPA
PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETA
QQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVA
EVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKAT
NLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMAL
MGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQT
IEANLALRRARTRVEALNTI.
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
GO:0042776mitochondrial ATP synthesis coupled proton transport
Vocabulary: INTERPRO
TermDefinition
IPR020003ATPase_a/bsu_AS
IPR000194ATPase_F1/V1/A1_a/bsu_nucl-bd
IPR027417P-loop_NTPase
IPR020546ATP_synth_F1_dsu/esu_N
IPR005722ATP_synth_F1_bsu
IPR001469ATP_synth_F1_dsu/esu
IPR024034ATPase_F1/V1_b/a_C
IPR020547ATP_synth_F1_dsu/esu_C
IPR036771ATPsynth_dsu/esu_N
IPR003593AAA+_ATPase
Vocabulary: Molecular Function
TermDefinition
GO:0046933proton-transporting ATP synthase activity, rotational mechanism
GO:0046961proton-transporting ATPase activity, rotational mechanism
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0009535chloroplast thylakoid membrane
GO:0005753mitochondrial proton-transporting ATP synthase complex
GO:0045261proton-transporting ATP synthase complex, catalytic core F(1)