BolSC47t61101H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	BolSC47t61101H-R
Unique Name	BolSC47t61101H-R-P
Type	polypeptide
Organism	Brassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length	521

Homology

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BLAST of BolSC47t61101H-R vs. GenBank_protein
Match: VDD65873.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 987 bits (2552), Expect = 0.000e+0
Identity = 520/520 (100.00%), Postives = 520/520 (100.00%), Query Frame = 0

Query:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520
            MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI
Sbjct:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520

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BLAST of BolSC47t61101H-R vs. GenBank_protein
Match: XP_013684709.1 (uncharacterized protein LOC106389069 [Brassica napus] >XP_022555204.1 uncharacterized protein LOC111204518 [Brassica napus] >XP_022557179.1 uncharacterized protein LOC111205510 [Brassica napus] >XP_022566913.1 uncharacterized protein LOC111210647 [Brassica napus] >XP_022566914.1 uncharacterized protein LOC111210649 [Brassica napus] >XP_022566917.1 uncharacterized protein LOC111210653 [Brassica napus] >XP_033129023.1 ATP synthase subunit beta, chloroplastic [Brassica rapa] >XP_033138924.1 ATP synthase subunit beta, chloroplastic [Brassica rapa])

HSP 1 Score: 987 bits (2552), Expect = 0.000e+0
Identity = 520/520 (100.00%), Postives = 520/520 (100.00%), Query Frame = 0

Query:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520
            MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI
Sbjct:   89 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 608

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BLAST of BolSC47t61101H-R vs. GenBank_protein
Match: XP_013743400.1 (uncharacterized protein LOC106446249 [Brassica napus])

HSP 1 Score: 986 bits (2549), Expect = 0.000e+0
Identity = 519/520 (99.81%), Postives = 520/520 (100.00%), Query Frame = 0

Query:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520
            MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAE+FTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI
Sbjct:   89 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAELFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 608

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BLAST of BolSC47t61101H-R vs. GenBank_protein
Match: QCE06959.1 (F-type H+-transporting ATPase subunit beta [Vigna unguiculata])

HSP 1 Score: 973 bits (2515), Expect = 0.000e+0
Identity = 513/520 (98.65%), Postives = 515/520 (99.04%), Query Frame = 0

Query:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520
            MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDT TTSPIHKSAPAFI LDT LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINE NLA+SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG+LQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGF LILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI
Sbjct:   89 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 608

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BLAST of BolSC47t61101H-R vs. GenBank_protein
Match: EFH63135.1 (H+-transporting two-sector ATPase, alpha/beta subunit, central region [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 965 bits (2495), Expect = 0.000e+0
Identity = 510/520 (98.08%), Postives = 512/520 (98.46%), Query Frame = 0

Query:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520
            MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDT TTSPIHKSAPAFI LDT LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINE NLA+SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG+LQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGF LILSGEFDSLPEQAFYLVGNIDEAT KATNLEMEKVKEIILSTNSGQIGVLPNHA IATAVDIGILKIRL NQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI
Sbjct:   89 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGEFDSLPEQAFYLVGNIDEATVKATNLEMEKVKEIILSTNSGQIGVLPNHALIATAVDIGILKIRLTNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 608

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BLAST of BolSC47t61101H-R vs. GenBank_protein
Match: XP_040966350.1 (ATP synthase subunit beta, chloroplastic-like [Gossypium hirsutum])

HSP 1 Score: 946 bits (2444), Expect = 0.000e+0
Identity = 498/520 (95.77%), Postives = 507/520 (97.50%), Query Frame = 0

Query:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520
            M+V+D G  LSVPVGGATLGRIFNVLGEPVDNLGPVDT TTSPIHKSAPAFI LDT LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINE NLA+SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG+LQERITSTK+GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQ+VKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGF LILSGE D LPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGIL+IRLN+QWLTMALMGGFARIGNNEITILVNDAEK SDIDPQEAQQ LEIAEANLRKAEGKRQTIEANLALRRARTRVEA+N I
Sbjct:   89 MEVIDTGAALSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQWLTMALMGGFARIGNNEITILVNDAEKGSDIDPQEAQQALEIAEANLRKAEGKRQTIEANLALRRARTRVEAINAI 608

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BLAST of BolSC47t61101H-R vs. GenBank_protein
Match: XP_035835881.1 (ATP synthase subunit beta, chloroplastic [Helianthus annuus])

HSP 1 Score: 941 bits (2433), Expect = 0.000e+0
Identity = 493/520 (94.81%), Postives = 506/520 (97.31%), Query Frame = 0

Query:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520
            MDV+D G PLSVPVGGATLGRIFNVLGEP+DNLGPVD  TT PIH+SAPAFI LDT LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINE N+A+SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLF+DNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTK+GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVG+EHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGF LILSGE D LPEQAFYLVGNIDEATAKA NLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGIL+IRLN+QWLTMALMGGFARIGNNEIT+LVNDAEK+SDIDPQEAQQTLEIAEA LRKAEGKRQTIEANLALRRARTRVEA+N I
Sbjct:   89 MDVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDNSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLILSGELDGLPEQAFYLVGNIDEATAKAMNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQWLTMALMGGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEAALRKAEGKRQTIEANLALRRARTRVEAINAI 608

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BLAST of BolSC47t61101H-R vs. GenBank_protein
Match: XP_028106663.1 (uncharacterized protein LOC114305725 [Camellia sinensis])

HSP 1 Score: 940 bits (2429), Expect = 0.000e+0
Identity = 493/520 (94.81%), Postives = 507/520 (97.50%), Query Frame = 0

Query:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520
            M+V+D   PLSVPVGGATLGRIFNVLGEPVDNLGPVDT TTSPIH+SAPAFI LDT LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINE N+A+SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG+LQERITSTK+GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQ+VKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGF LILSGE D LPEQAFYLVGNIDEATAKA NLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGIL+IRLN+QWLTMALMGGFARIGNNEIT+LVNDAEK+SDIDPQEAQQTLEIAEANL+KAEGKRQ IEANLALRRARTRVEA+N I
Sbjct:   50 MEVIDTEAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLILSGELDGLPEQAFYLVGNIDEATAKAMNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQWLTMALMGGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIAEANLKKAEGKRQIIEANLALRRARTRVEAINVI 569

[Close]

BLAST of BolSC47t61101H-R vs. GenBank_protein
Match: XP_029152632.1 (uncharacterized protein LOC114927092 [Arachis hypogaea])

HSP 1 Score: 932 bits (2409), Expect = 0.000e+0
Identity = 487/520 (93.65%), Postives = 506/520 (97.31%), Query Frame = 0

Query:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520
            M+V+D G PLSVPVGGATLGRIFNVLGEP+DNLGPVDT TTSPIH+SAPAFI LDT LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINE  + +SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTK+GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQ+VKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGF LILSGE D LPEQAFYLVGNIDEATAKATNLEME+VKEIILSTNSGQIGVLPNHAPIATAVDIGIL+IRLN+QW+TMALMGGFARIGNN+ITILVNDAEK+SDIDP+EA+QTLEIAEANL KAEGKRQ IEANL+LRRARTRVEA+N +
Sbjct:   89 MEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKTIGESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEATAKATNLEMEEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRLNDQWVTMALMGGFARIGNNKITILVNDAEKSSDIDPEEAKQTLEIAEANLSKAEGKRQLIEANLSLRRARTRVEAINML 608

[Close]

BLAST of BolSC47t61101H-R vs. GenBank_protein
Match: XP_034226077.1 (ATP synthase subunit beta, chloroplastic [Prunus dulcis])

HSP 1 Score: 932 bits (2408), Expect = 0.000e+0
Identity = 487/520 (93.65%), Postives = 505/520 (97.12%), Query Frame = 0

Query:    1 MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEALNTI 520
            M+V+D G PLSVPVGGATLGRIFNVLGEPVD+LGPVDT TTSPIH+SAPAFI LDT LSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINE N+A+SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMG+LQERITSTK+GSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQ+VK+TLQRYKELQDIIAILGLDELSE+DRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGF LILSGE D LPEQAFYLVGNIDEATAKAT L   +VKEIILSTNSGQIGVLPNHAP+ATAVDIGIL+IRLN+QWLTMALMGGFARIGNNEIT+LVNDAEK SDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEA+N +
Sbjct:   89 MEVIDTGAPLSVPVGGATLGRIFNVLGEPVDDLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDIIAILGLDELSEDDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEATAKATTLGTSEVKEIILSTNSGQIGVLPNHAPVATAVDIGILRIRLNDQWLTMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEAINVM 608

The following BLAST results are available for this feature:

BLAST of BolSC47t61101H-R vs. GenBank_protein

BLAST of BolSC47t61101H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
VDD65873.1	0.000e+0	100.00	unnamed protein product [Brassica oleracea]	[more]
XP_013684709.1	0.000e+0	100.00	uncharacterized protein LOC106389069 [Brassica nap...	[more]
XP_013743400.1	0.000e+0	99.81	uncharacterized protein LOC106446249 [Brassica nap...	[more]
QCE06959.1	0.000e+0	98.65	F-type H+-transporting ATPase subunit beta [Vigna ...	[more]
EFH63135.1	0.000e+0	98.08	H+-transporting two-sector ATPase, alpha/beta subu...	[more]
XP_040966350.1	0.000e+0	95.77	ATP synthase subunit beta, chloroplastic-like [Gos...	[more]
XP_035835881.1	0.000e+0	94.81	ATP synthase subunit beta, chloroplastic [Helianth...	[more]
XP_028106663.1	0.000e+0	94.81	uncharacterized protein LOC114305725 [Camellia sin...	[more]
XP_029152632.1	0.000e+0	93.65	uncharacterized protein LOC114927092 [Arachis hypo...	[more]
XP_034226077.1	0.000e+0	93.65	ATP synthase subunit beta, chloroplastic [Prunus d...	[more]

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GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0042776	mitochondrial ATP synthesis coupled proton transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005753	mitochondrial proton-transporting ATP synthase complex
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism

InterPro

Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 484..504
None	No IPR available	GENE3D	6.10.140.480		coord: 477..520 e-value: 4.9E-24 score: 85.6
None	No IPR available	PANTHER	PTHR15184:SF65	F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT	coord: 1..406
None	No IPR available	PANTHER	PTHR15184	ATP SYNTHASE	coord: 1..406
None	No IPR available	CDD	cd01133	F1-ATPase_beta	coord: 9..289 e-value: 0.0 score: 566.087
None	No IPR available	CDD	cd18110	ATP-synt_F1_beta_C	coord: 291..398 e-value: 3.99061E-77 score: 235.835
None	No IPR available	SUPERFAMILY	47917	C-terminal domain of alpha and beta subunits of F1 ATP synthase	coord: 287..402
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 76..268 e-value: 4.9E-9 score: 46.0
IPR036771	F0F1 ATP synthase delta/epsilon subunit, N-terminal	GENE3D	2.60.15.10		coord: 399..476 e-value: 1.0E-18 score: 69.2
IPR036771	F0F1 ATP synthase delta/epsilon subunit, N-terminal	SUPERFAMILY	51344	Epsilon subunit of F1F0-ATP synthase N-terminal domain	coord: 405..470
IPR020547	ATP synthase delta/epsilon subunit, C-terminal domain	PFAM	PF00401	ATP-synt_DE	coord: 474..516 e-value: 3.6E-6 score: 27.2
IPR024034	ATPase, F1/V1 complex, beta/alpha subunit, C-terminal	GENE3D	1.10.1140.10		coord: 287..398 e-value: 1.4E-58 score: 197.6
IPR001469	ATP synthase, F1 complex, delta/epsilon subunit	TIGRFAM	TIGR01216	TIGR01216	coord: 405..518 e-value: 2.7E-33 score: 112.7
IPR001469	ATP synthase, F1 complex, delta/epsilon subunit	HAMAP	MF_00530	ATP_synth_epsil_bac	coord: 388..516 score: 19.64151
IPR001469	ATP synthase, F1 complex, delta/epsilon subunit	CDD	cd12152	F1-ATPase_delta	coord: 405..511 e-value: 1.24129E-29 score: 110.679
IPR005722	ATP synthase, F1 complex, beta subunit	TIGRFAM	TIGR01039	TIGR01039	coord: 1..402 e-value: 6.5E-225 score: 745.1
IPR005722	ATP synthase, F1 complex, beta subunit	HAMAP	MF_01347	ATP_synth_beta_bact	coord: 1..402 score: 48.596596
IPR020546	ATP synthase, F1 complex, delta/epsilon subunit, N-terminal	PFAM	PF02823	ATP-synt_DE_N	coord: 405..469 e-value: 2.9E-18 score: 65.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 10..286 e-value: 1.2E-117 score: 394.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..289
IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	PFAM	PF00006	ATP-synt_ab	coord: 64..284 e-value: 3.4E-64 score: 216.4
IPR020003	ATPase, alpha/beta subunit, nucleotide-binding domain, active site	PROSITE	PS00152	ATPASE_ALPHA_BETA	coord: 275..284

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Boleracea_scaffold_47	contig	Boleracea_scaffold_47:117070..118697 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Interproscan on OGS1.0	2022-03-19
Blast2go on OGS1.0	2022-03-19
Diamond on OGS1.0 vs NR	2022-03-19
Brassica oleracea HDEM OGS1.0	2018-11-02

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
BolSC47t61101H-R	BolSC47t61101H-R	Brassica oleracea HDEM	mRNA	Boleracea_scaffold_47 117070..118697 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>BolSC47t61101H-R-P ID=BolSC47t61101H-R-P|Name=BolSC47t61101H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=521bp
MDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTLTTSPIHKSAPA
FIDLDTTLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINN
IAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINELNLADSKVALVYGQ
MNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSAL
LGRMPSAVGYQPTLSTEMGSLQERITSTKKGSITSIQAVYVPADDLTDPA
PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETA
QQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVA
EVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKAT
NLEMEKVKEIILSTNSGQIGVLPNHAPIATAVDIGILKIRLNNQWLTMAL
MGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQT
IEANLALRRARTRVEALNTI.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **Biological Process**
Term	Definition
GO:0015986	ATP synthesis coupled proton transport
GO:0042776	mitochondrial ATP synthesis coupled proton transport

Vocabulary: **INTERPRO**
Term	Definition
IPR020003	ATPase_a/bsu_AS
IPR000194	ATPase_F1/V1/A1_a/bsu_nucl-bd
IPR027417	P-loop_NTPase
IPR020546	ATP_synth_F1_dsu/esu_N
IPR005722	ATP_synth_F1_bsu
IPR001469	ATP_synth_F1_dsu/esu
IPR024034	ATPase_F1/V1_b/a_C
IPR020547	ATP_synth_F1_dsu/esu_C
IPR036771	ATPsynth_dsu/esu_N
IPR003593	AAA+_ATPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
GO:0046961	proton-transporting ATPase activity, rotational mechanism
GO:0005524	ATP binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0009535	chloroplast thylakoid membrane
GO:0005753	mitochondrial proton-transporting ATP synthase complex
GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)

Orthology

View orthology data for BolSC47t61101H-R-P