BolSC46t61015H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameBolSC46t61015H-R
Unique NameBolSC46t61015H-R-P
Typepolypeptide
OrganismBrassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length74
Homology
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BLAST of BolSC46t61015H-R vs. GenBank_protein
Match: YP_001123402.1 (photosystem II protein H [Capsella bursa-pastoris] >YP_001123666.1 photosystem II protein H [Lepidium virginicum] >YP_005089981.1 psbH gene product [Brassica napus] >YP_009161950.1 photosystem II protein H [Capsella rubella] >YP_009177894.1 photosystem II phosphoprotein [Brassica juncea] >YP_009182920.1 photosystem II protein H [Capsella grandiflora] >YP_009356469.1 PSII 10KDa phosphoprotein [Lepidium meyenii] >YP_009553796.1 photosystem II protein H [Brassica rapa] >YP_009564604.1 photosystem II protein H [Brassica oleracea] >YP_009756482.1 photosystem II protein H [Lepidium sativum] >YP_009890682.1 PSII 10KDa phosphoprotein [Aurinia corymbosa] >YP_009893527.1 PSII 10KDa phosphoprotein [Clypeola jonthlaspi] >YP_009899892.1 PSII 10KDa phosphoprotein [Neotorularia torulosa] >YP_009907390.1 PsbH [Brassica rapa subsp. rapa] >YP_009947403.1 photosystem II protein H [Lepidium apetalum] >YP_010029972.1 photosystem II protein H [Lepidium latifolium] >AKM97946.1 PsbH [Brassica oleracea var. capitata] >AMC31746.1 photosystem II protein H [Lepidium densiflorum] >ANW83307.1 PsbH [Brassica napus var. napus] >ASY93477.1 PsbH [Brassica rapa subsp. chinensis] >ASY93564.1 PsbH [Brassica rapa subsp. pekinensis] >ASY94086.1 PsbH [Brassica oleracea var. botrytis] >ASY94173.1 PsbH [Brassica oleracea var. gongylodes] >ASY94260.1 PsbH [Brassica oleracea var. italica] >ASY94695.1 PsbH [Brassica juncea subsp. integrifolia] >QKK50856.1 PSII 10KDa phosphoprotein [Turritis glabra])

HSP 1 Score: 140 bits (353), Expect = 8.830e-42
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 
Query:    1 MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 73
            MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN
Sbjct:    1 MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 73
[Close]
BLAST of BolSC46t61015H-R vs. GenBank_protein
Match: QKK47651.1 (PSII 10KDa phosphoprotein [Paysonia grandiflora])

HSP 1 Score: 139 bits (350), Expect = 2.530e-41
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0 
Query:    1 MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 73
            MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGI+MN
Sbjct:    1 MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGIAMN 73
[Close]
BLAST of BolSC46t61015H-R vs. GenBank_protein
Match: NP_051087.1 (photosystem II protein H [Arabidopsis thaliana] >YP_001123144.1 photosystem II protein H [Olimarabidopsis pumila] >YP_001123315.1 PSII 10KDa phosphoprotein [Barbarea verna] >YP_001123491.1 photosystem II protein H [Crucihimalaya wallichii] >YP_001123843.1 photosystem II protein H [Nasturtium officinale] >YP_006666321.1 photosystem II protein H [Pachycladon enysii] >YP_007889971.1 photosystem II protein H [Pachycladon cheesemanii] >YP_009046943.1 photosystem II protein H [Raphanus sativus] >YP_009121032.1 photosystem II phosphoprotein [Cardamine impatiens] >YP_009121117.1 photosystem II phosphoprotein [Cardamine resedifolia] >YP_009175704.1 photosystem II protein H [Eutrema salsugineum] >YP_009179759.1 PSII 10KDa phosphoprotein [Isatis tinctoria] >YP_009192817.1 photosystem II protein H [Eutrema yunnanense] >YP_009192904.1 photosystem II protein H [Eutrema heterophyllum] >YP_009230850.1 PSII 10KDa phosphoprotein [Arabidopsis arenosa] >YP_009230935.1 PSII 10KDa phosphoprotein [Arabidopsis cebennensis] >YP_009231020.1 PSII 10KDa phosphoprotein [Arabidopsis pedemontana] >YP_009231104.1 photosystem II protein H [Camelina sativa] >YP_009232385.1 photosystem II protein H [Eutrema halophilum] >YP_009232472.1 photosystem II protein H [Eutrema botschantzevii] >YP_009257857.1 PSII 10KDa phosphoprotein [Arabidopsis arenicola] >YP_009257942.1 PSII 10KDa phosphoprotein [Arabidopsis croatica] >YP_009258027.1 PSII 10KDa phosphoprotein [Arabidopsis neglecta] >YP_009258112.1 PSII 10KDa phosphoprotein [Arabidopsis petrogena] >YP_009258197.1 PSII 10KDa phosphoprotein [Arabidopsis suecica] >YP_009258282.1 PSII 10KDa phosphoprotein [Arabidopsis umezawana] >YP_009259608.1 PsbH [Brassica nigra] >YP_009261725.1 photosystem II protein H [Pugionium dolabratum] >YP_009261810.1 photosystem II protein H [Pugionium cornutum] >YP_009271596.1 photosystem II phosphoprotein [Cakile arabica] >YP_009342536.1 photosystem II protein H [Orychophragmus diffusus] >YP_009342621.1 photosystem II protein H [Orychophragmus taibaiensis] >YP_009342706.1 photosystem II protein H [Orychophragmus hupehensis] >YP_009353780.1 PsbH [Alyssum desertorum] >YP_009356050.1 PSII 10KDa phosphoprotein [Matthiola incana] >YP_009356297.1 PSII 10KDa phosphoprotein [Neotorularia korolkowii] >YP_009356382.1 photosystem II protein H [Thlaspi arvense] >YP_009356641.1 photosystem II protein H [Arabidopsis lyrata] >YP_009356726.1 photosystem II protein H [Arabidopsis halleri] >YP_009357296.1 photosystem II protein H [Arabidopsis lyrata subsp. lyrata] >YP_009400116.1 photosystem II protein H [Sinapis arvensis] >YP_009409494.1 photosystem II phosphoprotein [Hesperis matronalis] >YP_009409580.1 photosystem II phosphoprotein [Hesperis sylvestris] >YP_009409751.1 photosystem II phosphoprotein [Morettia canescens] >YP_009409837.1 photosystem II phosphoprotein [Braya humilis] >YP_009437998.1 PSII 10KDa phosphoprotein [Bunias erucago] >YP_009438083.1 PSII 10KDa phosphoprotein [Bunias orientalis] >YP_009460283.1 photosystem II phosphoprotein [Cardamine amara] >YP_009460368.1 photosystem II reaction center protein H [Cardamine oligosperma] >YP_009460454.1 photosystem II reaction center protein H [Cardamine parviflora] >YP_009488442.1 photosystem II protein H [Sisymbrium irio] >YP_009540060.1 PSII 10KDa phosphoprotein [Heldreichia bupleurifolia] >YP_009540147.1 PSII 10KDa phosphoprotein [Lunaria rediviva] >YP_009540321.1 PSII 10KDa phosphoprotein [Ricotia carnosula] >YP_009540406.1 PSII 10KDa phosphoprotein [Ricotia cretica] >YP_009540491.1 PSII 10KDa phosphoprotein [Ricotia davisiana] >YP_009890511.1 PSII 10KDa phosphoprotein [Alyssum alyssoides] >YP_009890595.1 PSII 10KDa phosphoprotein [Asperuginoides axillaris] >YP_009890768.1 PSII 10KDa phosphoprotein [Alyssum dasycarpum] >YP_009890853.1 PSII 10KDa phosphoprotein [Anelsonia eurycarpa] >YP_009891027.1 PSII 10KDa phosphoprotein [Arabis josiae] >YP_009891285.1 PSII 10KDa phosphoprotein [Alyssopsis mollis] >YP_009891538.1 PSII 10KDa phosphoprotein [Alliaria petiolata] >YP_009891709.1 PSII 10KDa phosphoprotein [Asta schaffneri] >YP_009891880.1 PSII 10KDa phosphoprotein [Arabidella trisecta] >YP_009892052.1 PSII 10KDa phosphoprotein [Brayopsis alpaminae] >YP_009892139.1 PSII 10KDa phosphoprotein [Boechera breweri] >YP_009892226.1 PSII 10KDa phosphoprotein [Boechera davidsonii] >YP_009892399.1 PSII 10KDa phosphoprotein [Boechera laevigata] >YP_009892486.1 PSII 10KDa phosphoprotein [Boechera puberula] >YP_009892573.1 PSII 10KDa phosphoprotein [Boechera pulchra] >YP_009892660.1 PSII 10KDa phosphoprotein [Boechera stricta] >YP_009892747.1 PSII 10KDa phosphoprotein [Boechera suffrutescens] >YP_009892921.1 PSII 10KDa phosphoprotein [Clausia aprica] >YP_009893008.1 PSII 10KDa phosphoprotein [Cardamine bulbifera] >YP_009893095.1 PSII 10KDa phosphoprotein [Chamira circaeoides] >YP_009893182.1 PSII 10KDa phosphoprotein [Cardamine enneaphyllos] >YP_009893268.1 PSII 10KDa phosphoprotein [Cardamine glanduligera] >YP_009893354.1 PSII 10KDa phosphoprotein [Cardamine hirsuta] >YP_009893441.1 PSII 10KDa phosphoprotein [Calepina irregularis] >YP_009893701.1 PSII 10KDa phosphoprotein [Crambe kralikii] >YP_009893788.1 PSII 10KDa phosphoprotein [Crucihimalaya lasiocarpa] >YP_009893959.1 PSII 10KDa phosphoprotein [Cakile maritima] >YP_009894046.1 PSII 10KDa phosphoprotein [Conringia orientalis] >YP_009894307.1 PSII 10KDa phosphoprotein [Cremolobus peruvianus] >YP_009894394.1 PSII 10KDa phosphoprotein [Conringia planisiliqua] >YP_009894481.1 PSII 10KDa phosphoprotein [Cardamine quinquefolia] >YP_009894655.1 PSII 10KDa phosphoprotein [Chorispora tenella] >YP_009894827.1 PSII 10KDa phosphoprotein [Dithyrea californica] >YP_009895174.1 PSII 10KDa phosphoprotein [Dontostemon micranthus] >YP_009895347.1 PSII 10KDa phosphoprotein [Delpinophytum patagonicum] >YP_009895434.1 PSII 10KDa phosphoprotein [Descurainia sophia] >YP_009895519.1 PSII 10KDa phosphoprotein [Diptychocarpus strictus] >YP_009895777.1 PSII 10KDa phosphoprotein [Erysimum bicolor] >YP_009895864.1 PSII 10KDa phosphoprotein [Smelowskia integrifolia] >YP_009895951.1 PSII 10KDa phosphoprotein [Eudema nubigena] >YP_009896124.1 PSII 10KDa phosphoprotein [Exhalimolobos weddellii] >YP_009896211.1 PSII 10KDa phosphoprotein [Fourraea alpina] >YP_009896298.1 PSII 10KDa phosphoprotein [Guiraoa arvensis] >YP_009896385.1 PSII 10KDa phosphoprotein [Goldbachia laevigata] >YP_009896558.1 PSII 10KDa phosphoprotein [Henophyton deserti] >YP_009896645.1 PSII 10KDa phosphoprotein [Horwoodia dicksoniae] >YP_009896732.1 PSII 10KDa phosphoprotein [Heliophila juncea] >YP_009896905.1 PSII 10KDa phosphoprotein [Hilliella paradoxa] >YP_009896989.1 PSII 10KDa phosphoprotein [Hesperis persica] >YP_009897159.1 PSII 10KDa phosphoprotein [Heliophila pusilla] >YP_009897325.1 PSII 10KDa phosphoprotein [Hesperis tristis] >YP_009897412.1 PSII 10KDa phosphoprotein [Iskandera alaica] >YP_009897745.1 PSII 10KDa phosphoprotein [Kernera saxatilis] >YP_009897831.1 PSII 10KDa phosphoprotein [Lunaria annua] >YP_009897918.1 PSII 10KDa phosphoprotein [Lepidium echinatum] >YP_009898089.1 PSII 10KDa phosphoprotein [Ladakiella klimesii] >YP_009898176.1 PSII 10KDa phosphoprotein [Lepidium perfoliatum] >YP_009898262.1 PSII 10KDa phosphoprotein [Litwinowia tenuissima] >YP_009898345.1 PSII 10KDa phosphoprotein [Matthiola alyssifolia] >YP_009898432.1 PSII 10KDa phosphoprotein [Mathewsia auriculata] >YP_009898690.1 PSII 10KDa phosphoprotein [Menonvillea linearis] >YP_009898777.1 PSII 10KDa phosphoprotein [Matthiola longipetala] >YP_009898864.1 PSII 10KDa phosphoprotein [Malcolmia maritima] >YP_009898951.1 PSII 10KDa phosphoprotein [Macropodium nivale] >YP_009899038.1 PSII 10KDa phosphoprotein [Mostacillastrum orbignyanum] >YP_009899124.1 PSII 10KDa phosphoprotein [Matthiola ovatifolia] >YP_009899209.1 PSII 10KDa phosphoprotein [Microthlaspi perfoliatum] >YP_009899294.1 PSII 10KDa phosphoprotein [Myagrum perfoliatum] >YP_009899468.1 PSII 10KDa phosphoprotein [Megacarpaea polyandra] >YP_009899721.1 PSII 10KDa phosphoprotein [Notoceras bicorne] >YP_009899808.1 PSII 10KDa phosphoprotein [Noccaea caerulescens] >YP_009899977.1 PSII 10KDa phosphoprotein [Noccaea vesicaria] >YP_009900062.1 PSII 10KDa phosphoprotein [Ochthodium aegyptiacum] >YP_009900235.1 PSII 10KDa phosphoprotein [Orychophragmus violaceus] >YP_009930834.1 PSII 10KDa phosphoprotein [Anzhengxia yechengnica] >YP_009930919.1 PSII 10KDa phosphoprotein [Atelanthera perpusilla] >YP_009931004.1 PSII 10KDa phosphoprotein [Braya alpina] >YP_009931174.1 PSII 10KDa phosphoprotein [Braya scharnhorstii] >YP_009931259.1 PSII 10KDa phosphoprotein [Catenulina hedysaroides] >YP_009931344.1 PSII 10KDa phosphoprotein [Christolea crassifolia] >YP_009931429.1 PSII 10KDa phosphoprotein [Cryptospora falcata] >YP_009931514.1 PSII 10KDa phosphoprotein [Cymatocarpus pilosissimus] >YP_009931599.1 PSII 10KDa phosphoprotein [Dichasianthus subtilissimus] >YP_009931769.1 PSII 10KDa phosphoprotein [Lachnoloma lehmannii] >YP_009932024.1 PSII 10KDa phosphoprotein [Leptaleum filifolium] >YP_009932193.1 PSII 10KDa phosphoprotein [Octoceras lehmannianum] >YP_009932533.1 PSII 10KDa phosphoprotein [Rhammatophyllum pachyrhizum] >YP_009932703.1 PSII 10KDa phosphoprotein [Sisymbriopsis mollipila] >YP_009932952.1 PSII 10KDa phosphoprotein [Solms-laubachia himalayensis] >YP_009933037.1 PSII 10KDa phosphoprotein [Solms-laubachia jafrii] >YP_009933122.1 PSII 10KDa phosphoprotein [Solms-laubachia kashgarica] >YP_009933292.1 PSII 10KDa phosphoprotein [Solms-laubachia linearis] >YP_009934216.1 PSII 10KDa phosphoprotein [Spryginia falcata] >YP_009934301.1 PSII 10KDa phosphoprotein [Spryginia winkleri] >YP_009934385.1 PSII 10KDa phosphoprotein [Streptoloma desertorum] >YP_009934469.1 PSII 10KDa phosphoprotein [Malcolmia africana] >YP_009934554.1 PSII 10KDa phosphoprotein [Tetracme quadricornis] >YP_010008400.1 PSII 10KDa phosphoprotein [Braya fengii] >YP_010008485.1 PSII 10KDa phosphoprotein [Braya parvia] >YP_010008570.1 PSII 10KDa phosphoprotein [Braya thomsonii] >YP_010008740.1 PSII 10KDa phosphoprotein [Cymatocarpus grossheimii] >YP_010008825.1 PSII 10KDa phosphoprotein [Cymatocarpus heterophyllus] >YP_010008910.1 PSII 10KDa phosphoprotein [Lepidostemon rosularis] >YP_010008995.1 PSII 10KDa phosphoprotein [Neotorularia rossica] >YP_010009080.1 PSII 10KDa phosphoprotein [Sisymbriopsis pamirica] >YP_010009165.1 PSII 10KDa phosphoprotein [Sisymbriopsis schugnana] >YP_010009585.1 PSII 10KDa phosphoprotein [Spryginia gracilis] >YP_010009669.1 PSII 10KDa phosphoprotein [Strigosella latifolia] >YP_010009753.1 PSII 10KDa phosphoprotein [Strigosella malacotricha] >YP_010009837.1 PSII 10KDa phosphoprotein [Strigosella scorpioides] >YP_010009922.1 PSII 10KDa phosphoprotein [Strigosella strigosa] >YP_010010007.1 PSII 10KDa phosphoprotein [Tetracme recurvata] >P56780.2 RecName: Full=Photosystem II reaction center protein H; Short=PSII-H; AltName: Full=Photosystem II 10 kDa phosphoprotein [Arabidopsis thaliana] >AMK97136.1 photosystem II protein H [Pachycladon fastigiatum] >ANH20898.1 photosystem II phosphoprotein [Arabidopsis halleri subsp. gemmifera] >ANH20984.1 photosystem II phosphoprotein [Arabidopsis lyrata subsp. petraea] >APS85110.1 photosystem II protein H [Orychophragmus zhongtiaoshanus] >APS85280.1 photosystem II protein H [Orychophragmus longisiliquus] >APW82311.1 PsbH [Raphanus sativus var. raphanistroides] >ASJ64327.1 photosystem II phosphoprotein [Euclidium syriacum] >ASJ64409.1 photosystem II phosphoprotein [Farsetia stylosa] >ASM41954.1 photosystem II phosphoprotein [Alyssum gmelinii] >ASY94347.1 PsbH [Raphanus raphanistrum subsp. landra] >ASY94521.1 PsbH [Raphanus sativus var. sativus] >ASY95391.1 PsbH [Brassica carinata] >ATJ03183.1 photosystem II phosphoprotein [Cardamine macrophylla] >AVI26058.1 photosystem II phosphoprotein [Crambe hispanica subsp. abyssinica] >AZQ19234.1 photosystem II reaction center protein H [Populus tomentosa] >KAF8044645.1 hypothetical protein N665_7345s0003 [Sinapis alba] >QHN89842.1 photosystem II phosphoprotein [Erysimum cheiranthoides] >QJF59696.1 photosystem II phosphoprotein [Cakile arctica] >QJF59783.1 photosystem II phosphoprotein [Cakile edentula] >QJF60392.1 photosystem II phosphoprotein [Cakile edentula subsp. harperi] >QJF60740.1 photosystem II phosphoprotein [Cakile edentula subsp. lacustris] >QJF65264.1 photosystem II phosphoprotein [Cakile lanceolata] >QJF65351.1 photosystem II phosphoprotein [Cakile lanceolata subsp. lanceolata] >QJF65435.1 photosystem II phosphoprotein [Cakile lanceolata subsp. fusiformis] >QJF65783.1 photosystem II phosphoprotein [Cakile maritima subsp. islandica] >QJF66305.1 photosystem II phosphoprotein [Cakile maritima subsp. euxina] >QJF67001.1 photosystem II phosphoprotein [Cakile maritima subsp. baltica] >QKK47303.1 PSII 10KDa phosphoprotein [Phoenicaulis cheiranthoides] >QKK47390.1 PSII 10KDa phosphoprotein [Parodiodoxa chionophila] >QKK47477.1 PSII 10KDa phosphoprotein [Polyctenium fremontii] >QKK47738.1 PSII 10KDa phosphoprotein [Pennellia longifolia] >QKK47825.1 PSII 10KDa phosphoprotein [Parolinia ornata] >QKK48080.1 PSII 10KDa phosphoprotein [Pugionium pterocarpum] >QKK48165.1 PSII 10KDa phosphoprotein [Petrocallis pyrenaica] >QKK48252.1 PSII 10KDa phosphoprotein [Pseudoarabidopsis toxophylla] >QKK48338.1 PSII 10KDa phosphoprotein [Pseudoturritis turrita] >QKK48424.1 PSII 10KDa phosphoprotein [Rhizobotrya alpina] >QKK48511.1 PSII 10KDa phosphoprotein [Rorippa islandica] >QKK48684.1 PSII 10KDa phosphoprotein [Robeschia schimperii] >QKK48771.1 PSII 10KDa phosphoprotein [Sisymbrium aculeolatum] >QKK48944.1 PSII 10KDa phosphoprotein [Smelowskia altaica] >QKK49031.1 PSII 10KDa phosphoprotein [Sisymbrium altissimum] >QKK49291.1 PSII 10KDa phosphoprotein [Schimpera arabica] >QKK49378.1 PSII 10KDa phosphoprotein [Smelowskia calycina] >QKK49552.1 PSII 10KDa phosphoprotein [Streptanthus cooperi] >QKK49639.1 PSII 10KDa phosphoprotein [Sphaerocardamum divaricatum] >QKK49726.1 PSII 10KDa phosphoprotein [Smelowskia flavissima] >QKK49813.1 PSII 10KDa phosphoprotein [Sarcodraba karraikensis] >QKK49900.1 PSII 10KDa phosphoprotein [Stenopetalum lineare] >QKK49987.1 PSII 10KDa phosphoprotein [Scoliaxon mexicanus] >QKK50074.1 PSII 10KDa phosphoprotein [Sisymbrium officinale] >QKK50161.1 PSII 10KDa phosphoprotein [Savignya parviflora] >QKK50248.1 PSII 10KDa phosphoprotein [Sandbergia perplexa] >QKK50335.1 PSII 10KDa phosphoprotein [Stanleya pinnata] >QKK50595.1 PSII 10KDa phosphoprotein [Sterigmostemum violaceum] >QKK50682.1 PSII 10KDa phosphoprotein [Schizopetalon walkeri] >QKK50943.1 PSII 10KDa phosphoprotein [Tropidocarpum gracile] >QKK51030.1 PSII 10KDa phosphoprotein [Thelypodium laciniatum] >QKK51199.1 PSII 10KDa phosphoprotein [Teesdalia nudicaulis] >QKK51284.1 PSII 10KDa phosphoprotein [Vella lucentina] >QKK51371.1 PSII 10KDa phosphoprotein [Yinshania acutangula] >QKK51458.1 PSII 10KDa phosphoprotein [Yinshania furcatopilosa] >QKK51545.1 PSII 10KDa phosphoprotein [Yinshania henryi] >QKK51631.1 PSII 10KDa phosphoprotein [Zuvanda crenulata] >QKK51718.1 PSII 10KDa phosphoprotein [Atacama nivea] >QKK51805.1 PSII 10KDa phosphoprotein [Conringia clavata] >QKK51979.1 PSII 10KDa phosphoprotein [Halimolobos jaegeri] >QKK52065.1 PSII 10KDa phosphoprotein [Malcolmia bicolor] >QKK52152.1 PSII 10KDa phosphoprotein [Neuontobotrys berningeri] >QKK52326.1 PSII 10KDa phosphoprotein [Pseudofortuynia leucoclada] >QKK52412.1 PSII 10KDa phosphoprotein [Shehbazia tibetica] >QOP63794.1 photosystem II protein H [Eruca vesicaria subsp. sativa] >QUI76322.1 photosystem II phosphoprotein [Moricandia arvensis] >CUA65349.1 PSII 10KDa phosphoprotein [Arabidopsis halleri subsp. halleri] >CZF90156.1 PSII 10KDa phosphoprotein [Arabidopsis halleri subsp. dacica] >CZF90581.1 PSII 10KDa phosphoprotein [Arabidopsis halleri subsp. ovirensis] >CZF90751.1 PSII 10KDa phosphoprotein [Arabidopsis halleri subsp. tatrica] >CZF90921.1 PSII 10KDa phosphoprotein [Arabidopsis kamchatica subsp. kamchatica] >CZF91176.1 PSII 10KDa phosphoprotein [Arabidopsis kamchatica subsp. kawasakiana] >CZF93131.1 PSII 10KDa phosphoprotein [Arabidopsis neglecta subsp. neglecta] >CZF94066.1 PSII 10KDa phosphoprotein [Arabidopsis petraea subsp. septentrionalis] >CZF94236.1 PSII 10KDa phosphoprotein [Arabidopsis petraea subsp. umbrosa] >SFV96963.1 photosystem II protein H [Ionopsidium megalospermum] >SOG99002.1 PSII 10KDa phosphoprotein [Arabidopsis arenosa subsp. borbasii] >BBN91048.1 photosystem II protein H [Eutrema japonicum] >BBN91462.1 photosystem II protein H [Eutrema tenue])

HSP 1 Score: 139 bits (349), Expect = 3.600e-41
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0 
Query:    1 MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 73
            MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGIS+N
Sbjct:    1 MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISVN 73
[Close]
BLAST of BolSC46t61015H-R vs. GenBank_protein
Match: YP_001123228.1 (PSII 10KDa phosphoprotein [Arabis hirsuta] >YP_009000362.1 psbH protein [Arabis alpina] >YP_009478004.1 photosystem II protein H [Arabis flagellosa] >YP_009827384.1 PsbH [Arabis scabra] >YP_009893614.1 PSII 10KDa phosphoprotein [Cardamine kitaibelii] >YP_009894220.1 PSII 10KDa phosphoprotein [Cardamine pentaphyllos] >YP_009896037.1 PSII 10KDa phosphoprotein [Erysimum odoratum] >YP_009897580.1 PSII 10KDa phosphoprotein [Iodanthus pinnatifidus] >YP_010026502.1 photosystem II protein H [Arabis paniculata] >ARI46764.1 photosystem II protein H [Arabis stelleri subsp. japonica] >QKG03395.1 photosystem II protein H [Erysimum teretifolium] >QKK50508.1 PSII 10KDa phosphoprotein [Scapiarabis saxicola] >BBC42868.1 photosystem II protein H [Arabis hirsuta var. nipponica] >QIV22546.1 PsbH [Arabis scabra])

HSP 1 Score: 138 bits (348), Expect = 5.120e-41
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 0 
Query:    1 MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 73
            MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMG+AMALFAVFLSIILEIYNSSVLLDGIS+N
Sbjct:    1 MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGIAMALFAVFLSIILEIYNSSVLLDGISVN 73
[Close]
BLAST of BolSC46t61015H-R vs. GenBank_protein
Match: YP_009192730.1 (photosystem II protein H [Schrenkiella parvula] >ALP73107.1 photosystem II protein H [Schrenkiella parvula])

HSP 1 Score: 138 bits (348), Expect = 5.120e-41
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 0 
Query:    1 MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 73
            MATQT+EDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGIS+N
Sbjct:    1 MATQTIEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISVN 73
[Close]
BLAST of BolSC46t61015H-R vs. GenBank_protein
Match: YP_009933207.1 (PSII 10KDa phosphoprotein [Solms-laubachia lanata] >YP_009933540.1 PSII 10KDa phosphoprotein [Solms-laubachia platycarpa] >YP_009933707.1 PSII 10KDa phosphoprotein [Solms-laubachia pulcherrima] >YP_009933877.1 PSII 10KDa phosphoprotein [Solms-laubachia sunhangiana] >YP_009933962.1 PSII 10KDa phosphoprotein [Solms-laubachia villosa] >YP_010009335.1 PSII 10KDa phosphoprotein [Solms-laubachia grandiflora] >YP_010009420.1 PSII 10KDa phosphoprotein [Solms-laubachia mieheorum] >YP_010009504.1 PSII 10KDa phosphoprotein [Solms-laubachia tianbaoshanensis] >QNR92422.1 PSII 10KDa phosphoprotein [Solms-laubachia eurycarpa] >QNR92507.1 PSII 10KDa phosphoprotein [Solms-laubachia grandiflora] >QNR92847.1 PSII 10KDa phosphoprotein [Solms-laubachia lanata] >QNR93102.1 PSII 10KDa phosphoprotein [Solms-laubachia mieheorum] >QNR93349.1 PSII 10KDa phosphoprotein [Solms-laubachia platycarpa])

HSP 1 Score: 138 bits (348), Expect = 5.120e-41
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 0 
Query:    1 MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 73
            MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFA+FLSIILEIYNSSVLLDGIS+N
Sbjct:    1 MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAIFLSIILEIYNSSVLLDGISVN 73
[Close]
BLAST of BolSC46t61015H-R vs. GenBank_protein
Match: KAF3505609.1 (hypothetical protein F2Q69_00008962 [Brassica cretica])

HSP 1 Score: 138 bits (347), Expect = 7.270e-41
Identity = 72/73 (98.63%), Postives = 72/73 (98.63%), Query Frame = 0 
Query:    1 MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 73
            MA QTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN
Sbjct:    1 MAKQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 73
[Close]
BLAST of BolSC46t61015H-R vs. GenBank_protein
Match: QKK43105.1 (PSII 10KDa phosphoprotein [Heldreichia bupleurifolia])

HSP 1 Score: 138 bits (347), Expect = 7.270e-41
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 0 
Query:    1 MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 73
            MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSV+LDGIS+N
Sbjct:    1 MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVILDGISVN 73
[Close]
BLAST of BolSC46t61015H-R vs. GenBank_protein
Match: KFK29598.1 (hypothetical protein AALP_AA7G155000 [Arabis alpina])

HSP 1 Score: 138 bits (348), Expect = 8.400e-41
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 0 
Query:    1 MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 73
            MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMG+AMALFAVFLSIILEIYNSSVLLDGIS+N
Sbjct:   18 MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGIAMALFAVFLSIILEIYNSSVLLDGISVN 90
[Close]
BLAST of BolSC46t61015H-R vs. GenBank_protein
Match: QKK52239.1 (PSII 10KDa phosphoprotein [Nerisyrenia camporum])

HSP 1 Score: 137 bits (346), Expect = 1.030e-40
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 0 
Query:    1 MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGISMN 73
            MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGI++N
Sbjct:    1 MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLSIILEIYNSSVLLDGIAVN 73
The following BLAST results are available for this feature:
BLAST of BolSC46t61015H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20
Match NameE-valueIdentityDescription
YP_001123402.18.830e-42100.00photosystem II protein H [Capsella bursa-pastoris]... [more]
QKK47651.12.530e-4198.63PSII 10KDa phosphoprotein [Paysonia grandiflora][more]
NP_051087.13.600e-4198.63photosystem II protein H [Arabidopsis thaliana] >Y... [more]
YP_001123228.15.120e-4197.26PSII 10KDa phosphoprotein [Arabis hirsuta] >YP_009... [more]
YP_009192730.15.120e-4197.26photosystem II protein H [Schrenkiella parvula] >A... [more]
YP_009933207.15.120e-4197.26PSII 10KDa phosphoprotein [Solms-laubachia lanata]... [more]
KAF3505609.17.270e-4198.63hypothetical protein F2Q69_00008962 [Brassica cret... [more]
QKK43105.17.270e-4197.26PSII 10KDa phosphoprotein [Heldreichia bupleurifol... [more]
KFK29598.18.400e-4197.26hypothetical protein AALP_AA7G155000 [Arabis alpin... [more]
QKK52239.11.030e-4097.26PSII 10KDa phosphoprotein [Nerisyrenia camporum][more]

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GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015979 photosynthesis
biological_process GO:0050821 protein stabilization
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0009523 photosystem II
cellular_component GO:0009654 photosystem II oxygen evolving complex
molecular_function GO:0003729 mRNA binding
molecular_function GO:0042301 phosphate ion binding
InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036863Photosystem II reaction centre protein H superfamilyGENE3D1.20.5.880Photosystem II reaction center protein Hcoord: 1..64
e-value: 5.6E-40
score: 136.9
IPR036863Photosystem II reaction centre protein H superfamilySUPERFAMILY161025Photosystem II 10 kDa phosphoprotein PsbHcoord: 14..73
IPR001056Photosystem II reaction centre protein HPFAMPF00737PsbHcoord: 16..67
e-value: 1.0E-31
score: 108.3
IPR001056Photosystem II reaction centre protein HPANTHERPTHR34469PHOTOSYSTEM II REACTION CENTER PROTEIN Hcoord: 1..73
IPR001056Photosystem II reaction centre protein HHAMAPMF_00752PSII_PsbHcoord: 13..73
score: 21.841089
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..61
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..41
NoneNo IPR availableTMHMMTMhelixcoord: 45..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Boleracea_scaffold_46contigBoleracea_scaffold_46:121683..121904 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Interproscan on OGS1.02022-03-19
Blast2go on OGS1.02022-03-19
Diamond on OGS1.0 vs NR2022-03-19
Brassica oleracea HDEM OGS1.02018-11-02
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
BolSC46t61015H-RBolSC46t61015H-RBrassica oleracea HDEMmRNABoleracea_scaffold_46 121683..121904 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>BolSC46t61015H-R-P ID=BolSC46t61015H-R-P|Name=BolSC46t61015H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=74bp
MATQTVEDSSRSGPRSTTVGKLLKPLNSEYGKVAPGWGTTPLMGVAMALF
AVFLSIILEIYNSSVLLDGISMN.
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0009523photosystem II
GO:0009535chloroplast thylakoid membrane
GO:0009654photosystem II oxygen evolving complex
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR001056PSII_PsbH
IPR036863PSII_PsbH_sf
Vocabulary: Biological Process
TermDefinition
GO:0050821protein stabilization
GO:0015979photosynthesis
Vocabulary: Molecular Function
TermDefinition
GO:0042301phosphate ion binding
GO:0003729mRNA binding