BolC9t60045H-R-P (polypeptide) Brassica oleracea HDEM
Overview
Homology
BLAST of BolC9t60045H-R vs. GenBank_protein
Match: VDD34722.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 311 bits (797), Expect = 8.470e-107 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 Query: 1 MLLLSLTLVILFHCSMYWLSARVIWMVGTRRTRHKLRRRRGLFITLLLVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQAFNRRSININQQAQAPRLRRDLSPTNHCGMLLFFKPASDLEASCVQIRSSLVYFHFPHTIK 158 MLLLSLTLVILFHCSMYWLSARVIWMVGTRRTRHKLRRRRGLFITLLLVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQAFNRRSININQQAQAPRLRRDLSPTNHCGMLLFFKPASDLEASCVQIRSSLVYFHFPHTIK Sbjct: 1 MLLLSLTLVILFHCSMYWLSARVIWMVGTRRTRHKLRRRRGLFITLLLVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQAFNRRSININQQAQAPRLRRDLSPTNHCGMLLFFKPASDLEASCVQIRSSLVYFHFPHTIK 158
BLAST of BolC9t60045H-R vs. GenBank_protein
Match: CAF1791905.1 (unnamed protein product, partial [Brassica napus]) HSP 1 Score: 305 bits (782), Expect = 1.790e-103 Identity = 155/158 (98.10%), Postives = 156/158 (98.73%), Query Frame = 0 Query: 1 MLLLSLTLVILFHCSMYWLSARVIWMVGTRRTRHKLRRRRGLFITLLLVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQAFNRRSININQQAQAPRLRRDLSPTNHCGMLLFFKPASDLEASCVQIRSSLVYFHFPHTIK 158 MLLLSLTLVILFHCSMYWLSARVIWMVGTRRTR KLRRRRGLF+TLLLVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQAFNRRSININQQAQAPRLRRDLSPTNHCGMLLFFKPASDLEASCVQIRSS VYFHFPHTIK Sbjct: 1 MLLLSLTLVILFHCSMYWLSARVIWMVGTRRTRQKLRRRRGLFVTLLLVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQAFNRRSININQQAQAPRLRRDLSPTNHCGMLLFFKPASDLEASCVQIRSSSVYFHFPHTIK 158
BLAST of BolC9t60045H-R vs. GenBank_protein
Match: KAF3505192.1 (hypothetical protein F2Q69_00045709 [Brassica cretica]) HSP 1 Score: 184 bits (468), Expect = 2.120e-55 Identity = 94/97 (96.91%), Postives = 96/97 (98.97%), Query Frame = 0 Query: 2 LLLSLTLVILFHCSMYWLSARVIWMVGTRRTRHKLRRRRGLFITLLLVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQA 98 LLLSLTLV+LFHCSMYWLSARVIWMVGTRRTR KLRRRRGLF+TLLLVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQA Sbjct: 35 LLLSLTLVVLFHCSMYWLSARVIWMVGTRRTRQKLRRRRGLFVTLLLVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQA 131
BLAST of BolC9t60045H-R vs. GenBank_protein
Match: KAF2575630.1 (hypothetical protein F2Q70_00006760 [Brassica cretica]) HSP 1 Score: 184 bits (468), Expect = 4.070e-54 Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 0 Query: 1 MLLLSLTLVILFHCSMYWLSARVIWMVGTRRTRHKLRRRRGLFITLLLVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQA 98 MLLLSLTLV+LFHCSMYWLSARVIWMVGTRRTR KLRRRRGLF+TL LVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQA Sbjct: 28 MLLLSLTLVVLFHCSMYWLSARVIWMVGTRRTRQKLRRRRGLFVTLFLVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQA 125
BLAST of BolC9t60045H-R vs. GenBank_protein
Match: KAF3563584.1 (hypothetical protein DY000_02019852 [Brassica cretica]) HSP 1 Score: 184 bits (468), Expect = 4.070e-54 Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 0 Query: 1 MLLLSLTLVILFHCSMYWLSARVIWMVGTRRTRHKLRRRRGLFITLLLVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQA 98 MLLLSLTLV+LFHCSMYWLSARVIWMVGTRRTR KLRRRRGLF+TL LVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQA Sbjct: 28 MLLLSLTLVVLFHCSMYWLSARVIWMVGTRRTRQKLRRRRGLFVTLFLVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQA 125
BLAST of BolC9t60045H-R vs. GenBank_protein
Match: KAF2536127.1 (hypothetical protein F2Q68_00023429 [Brassica cretica]) HSP 1 Score: 184 bits (468), Expect = 4.070e-54 Identity = 94/98 (95.92%), Postives = 96/98 (97.96%), Query Frame = 0 Query: 1 MLLLSLTLVILFHCSMYWLSARVIWMVGTRRTRHKLRRRRGLFITLLLVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQA 98 MLLLSLTLV+LFHCSMYWLSARVIWMVGTRRTR KLRRRRGLF+TL LVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQA Sbjct: 28 MLLLSLTLVVLFHCSMYWLSARVIWMVGTRRTRQKLRRRRGLFVTLFLVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQA 125
BLAST of BolC9t60045H-R vs. GenBank_protein
Match: AAZ67609.1 (80A08_24 [Brassica rapa subsp. pekinensis]) HSP 1 Score: 129 bits (324), Expect = 5.920e-32 Identity = 71/97 (73.20%), Postives = 76/97 (78.35%), Query Frame = 0 Query: 2 LLLSLTLVILFHCSMYWLSARVIWMVGTRRTRHKLRRRRGLFITLLLVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQA 98 LL+SL LV+LFHCSMY L ARV WMVG RRTR LRRRRGLF+ LL VVLS +L+F PAMSREDS A AI RS S DV SVRRQTSH VHYVQA Sbjct: 85 LLVSLALVVLFHCSMYCLFARVNWMVGGRRTRQTLRRRRGLFVVLLPVVLSFRLIFTPAMSREDSLATAILRSSDSKADVSPSVRRQTSHSVHYVQA 181
BLAST of BolC9t60045H-R vs. GenBank_protein
Match: KAF3597001.1 (hypothetical protein DY000_02025994 [Brassica cretica]) HSP 1 Score: 124 bits (311), Expect = 7.140e-32 Identity = 67/97 (69.07%), Postives = 76/97 (78.35%), Query Frame = 0 Query: 2 LLLSLTLVILFHCSMYWLSARVIWMVGTRRTRHKLRRRRGLFITLLLVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQA 98 LLLS TLV++FHCSMY ARVIW+VG RRTR +RRRRGLF+ LL VVLS +L+F PAMSREDS A A+ RS S V SVRRQTSH+VHYVQA Sbjct: 47 LLLSFTLVVMFHCSMYCSFARVIWIVGGRRTRQTVRRRRGLFVVLLPVVLSFRLIFTPAMSREDSLATAMLRSSDSKAGVSPSVRRQTSHNVHYVQA 143
BLAST of BolC9t60045H-R vs. GenBank_protein
Match: KAG2262001.1 (hypothetical protein Bca52824_069080 [Brassica carinata]) HSP 1 Score: 125 bits (315), Expect = 3.830e-31 Identity = 64/83 (77.11%), Postives = 69/83 (83.13%), Query Frame = 0 Query: 16 MYWLSARVIWMVGTRRTRHKLRRRRGLFITLLLVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSSVRRQTSHDVHYVQA 98 M WLS+RVIWMVG R+TR LRRRRGLF+ LLLV+L CQLVFPP +SREDS A AIRRSLGSNPDV SVRR TSH V YVQA Sbjct: 1 MCWLSSRVIWMVGGRQTRQTLRRRRGLFVALLLVILPCQLVFPPEISREDSLAPAIRRSLGSNPDVPYSVRRLTSHSVLYVQA 83
BLAST of BolC9t60045H-R vs. GenBank_protein
Match: KAF2603622.1 (hypothetical protein F2Q70_00024740 [Brassica cretica]) HSP 1 Score: 122 bits (305), Expect = 7.070e-29 Identity = 69/97 (71.13%), Postives = 73/97 (75.26%), Query Frame = 0 Query: 4 LSLTLVILFHCSMYWLSARVIWMVGTRRTRHKLRRRRGLFITLLLVVLSCQLVFPPAMSREDSFAAAIRRSLGSNPDVLSS--VRRQTSHDVHYVQA 98 LSL LV+LFHCSMY L ARV WMVG RRTR LRRRRGLF+ LL VVLS +L+F PAMSREDS A AI RS S DV S VR QTSH VHYVQA Sbjct: 204 LSLALVVLFHCSMYCLIARVNWMVGGRRTRQTLRRRRGLFVALLPVVLSFRLIFTPAMSREDSLATAILRSSDSKADVSPSLSVRHQTSHSVHYVQA 300 The following BLAST results are available for this feature:
BLAST of BolC9t60045H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR) Total hits: 20
Pagesback to topGO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
InterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BolC9t60045H-R-P ID=BolC9t60045H-R-P|Name=BolC9t60045H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=159bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
Orthology
View orthology data for BolC9t60045H-R-P
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