BolC9t60006H-R-P (polypeptide) Brassica oleracea HDEM

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	BolC9t60006H-R
Unique Name	BolC9t60006H-R-P
Type	polypeptide
Organism	Brassica oleracea HDEM (cv. HDEM, Wild cabbage)
Sequence length	405

Homology

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BLAST of BolC9t60006H-R vs. GenBank_protein
Match: VDD34683.1 (unnamed protein product [Brassica oleracea])

HSP 1 Score: 720 bits (1858), Expect = 2.630e-260
Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0

Query:    1 MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSANLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSDRDGRGSRKKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNRVVHHNHQTISSSDPIRLTIPSNTVTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHISRPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSLVFGGCDKKRTGLLDCRCEKAVTVSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV 404
            MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSANLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSDRDGRGSRKKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNRVVHHNHQTISSSDPIRLTIPSNTVTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHISRPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSLVFGGCDKKRTGLLDCRCEKAVTVSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV
Sbjct:    1 MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSANLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSDRDGRGSRKKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNRVVHHNHQTISSSDPIRLTIPSNTVTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHISRPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSLVFGGCDKKRTGLLDCRCEKAVTVSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV 404

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BLAST of BolC9t60006H-R vs. GenBank_protein
Match: KAF3568542.1 (hypothetical protein DY000_02019815 [Brassica cretica])

HSP 1 Score: 708 bits (1828), Expect = 9.790e-256
Identity = 397/404 (98.27%), Postives = 400/404 (99.01%), Query Frame = 0

Query:    1 MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSANLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSDRDGRGSRKKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNRVVHHNHQTISSSDPIRLTIPSNTVTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHISRPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSLVFGGCDKKRTGLLDCRCEKAVTVSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV 404
            MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKS NLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSD+DGRGS KKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNRVVHHNHQTISSSDPIRLTIPSNTVTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHI+RPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSL FGGCDKK+TGLLDCRCEKAV VSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV
Sbjct:    1 MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSTNLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSDQDGRGSSKKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNRVVHHNHQTISSSDPIRLTIPSNTVTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHIARPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSLAFGGCDKKKTGLLDCRCEKAVMVSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV 404

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BLAST of BolC9t60006H-R vs. GenBank_protein
Match: XP_013609376.1 (PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 4 [Brassica oleracea var. oleracea] >CAF1791511.1 unnamed protein product [Brassica napus] >CDY41392.1 BnaCnng10280D [Brassica napus])

HSP 1 Score: 705 bits (1820), Expect = 1.620e-254
Identity = 395/404 (97.77%), Postives = 399/404 (98.76%), Query Frame = 0

Query:    1 MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSANLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSDRDGRGSRKKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNRVVHHNHQTISSSDPIRLTIPSNTVTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHISRPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSLVFGGCDKKRTGLLDCRCEKAVTVSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV 404
            MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSANLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSD+DGRGS KKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNR+VHHNHQTISSSDPIRLTIPSN VTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHI+RPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSL FGGCDKK+TGLLDC CEKAV VSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV
Sbjct:    1 MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSANLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSDQDGRGSSKKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNRIVHHNHQTISSSDPIRLTIPSNNVTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHIARPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSLAFGGCDKKKTGLLDCSCEKAVMVSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV 404

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BLAST of BolC9t60006H-R vs. GenBank_protein
Match: XP_013666145.1 (protein PHYTOCHROME KINASE SUBSTRATE 4-like [Brassica napus])

HSP 1 Score: 705 bits (1819), Expect = 2.300e-254
Identity = 395/404 (97.77%), Postives = 398/404 (98.51%), Query Frame = 0

Query:    1 MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSANLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSDRDGRGSRKKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNRVVHHNHQTISSSDPIRLTIPSNTVTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHISRPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSLVFGGCDKKRTGLLDCRCEKAVTVSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV 404
            MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSANLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSD DGRGS KKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNR+VHHNHQTISSSDPIRLTIPSN VTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHI+RPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSL FGGCDKK+TGLLDC CEKAV VSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV
Sbjct:    1 MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSANLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSDHDGRGSSKKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNRIVHHNHQTISSSDPIRLTIPSNNVTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHIARPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSLAFGGCDKKKTGLLDCSCEKAVMVSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV 404

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BLAST of BolC9t60006H-R vs. GenBank_protein
Match: KAF2536138.1 (hypothetical protein F2Q68_00023392 [Brassica cretica] >KAF2572352.1 hypothetical protein F2Q70_00006720 [Brassica cretica])

HSP 1 Score: 704 bits (1817), Expect = 4.640e-254
Identity = 394/404 (97.52%), Postives = 399/404 (98.76%), Query Frame = 0

Query:    1 MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSANLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSDRDGRGSRKKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNRVVHHNHQTISSSDPIRLTIPSNTVTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHISRPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSLVFGGCDKKRTGLLDCRCEKAVTVSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV 404
            MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKS NLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSD+DGRGS KKGPRWFFRRRTCPCSSSKSVQVRETKPRIAE KTGSDRTISNR+VHHNHQTISSSDPIRLTIPSN+VTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHI+RPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSL FGGCDKK+TGLLDCRCEKAV VSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV
Sbjct:    1 MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSTNLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSDQDGRGSTKKGPRWFFRRRTCPCSSSKSVQVRETKPRIAELKTGSDRTISNRIVHHNHQTISSSDPIRLTIPSNSVTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHIARPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSLAFGGCDKKKTGLLDCRCEKAVMVSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV 404

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BLAST of BolC9t60006H-R vs. GenBank_protein
Match: KAF3505099.1 (hypothetical protein F2Q69_00045661 [Brassica cretica])

HSP 1 Score: 704 bits (1817), Expect = 4.640e-254
Identity = 395/404 (97.77%), Postives = 399/404 (98.76%), Query Frame = 0

Query:    1 MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSANLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSDRDGRGSRKKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNRVVHHNHQTISSSDPIRLTIPSNTVTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHISRPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSLVFGGCDKKRTGLLDCRCEKAVTVSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV 404
            MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSANLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQ SDRDGRGS KKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNR+VHHNHQTISSSDPIRLTIPSN+VTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHI+RPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSL FGGCDKK+TGLLDC CEKAV VSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV
Sbjct:    1 MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSANLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQESDRDGRGSTKKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNRIVHHNHQTISSSDPIRLTIPSNSVTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHIARPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSLAFGGCDKKKTGLLDCSCEKAVMVSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV 404

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BLAST of BolC9t60006H-R vs. GenBank_protein
Match: XP_013666203.1 (protein PHYTOCHROME KINASE SUBSTRATE 4 [Brassica napus] >CAF2361364.1 unnamed protein product [Brassica napus])

HSP 1 Score: 660 bits (1702), Expect = 1.360e-236
Identity = 378/408 (92.65%), Postives = 384/408 (94.12%), Query Frame = 0

Query:    1 MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSANLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSDRDGRGSRKKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNRVVHHNHQTISSSDPIRLTIPSNTVTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXX---SPKGVTTTDEEAASDASSDLFEIESFSTQHISRPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSLVFGG-CDKKRTGLLDCRCEKAVTVSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV 404
            MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKS NLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSD DGRGS KKGPRWFFRRRTCPCSSSKSVQV+ETKPRIAEFKTGSDRT+S  +VHHNHQ ISSSDPIRLTIPSN VTRTINYAGNSRESS PVSNFSFPTLNPIK   XXXXXXXXXXXXXX   SPKGVTTTDEEAASDASSDLFEIESFSTQHISRPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSL FGG CDKKRT LLDCRCEKAV VSGGQRLVQPLK+VSVQDDVMQKVLCNNGSS     +LK L+NKSSFLV
Sbjct:    1 MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSTNLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSDHDGRGSSKKGPRWFFRRRTCPCSSSKSVQVQETKPRIAEFKTGSDRTVS--IVHHNHQRISSSDPIRLTIPSNNVTRTINYAGNSRESSVPVSNFSFPTLNPIKPDLXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHISRPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSLTFGGGCDKKRTALLDCRCEKAVMVSGGQRLVQPLKNVSVQDDVMQKVLCNNGSS-----TLKMLNNKSSFLV 401

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BLAST of BolC9t60006H-R vs. GenBank_protein
Match: XP_009122629.1 (protein PHYTOCHROME KINASE SUBSTRATE 4 [Brassica rapa])

HSP 1 Score: 656 bits (1693), Expect = 3.440e-235
Identity = 377/409 (92.18%), Postives = 383/409 (93.64%), Query Frame = 0

Query:    1 MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSANLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSDRDGRGSRKKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNRVVHHNHQTISSSDPIRLTIPSNTVTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXX---SPKGVTTT-DEEAASDASSDLFEIESFSTQHISRPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSLVFGG-CDKKRTGLLDCRCEKAVTVSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV 404
            MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQ EDTEISIFEARRYFSESGSNDRSKS NL+GPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSD +GRGS KKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNR+VHHNHQTISSSDPIRLTIPSN VTRTINYAGNSRESSAPVSNFSFPTLNPIK     XXXXXXXXXXXX   SPKGVTTT DEEAASDASSDLFEIESFSTQHI+RP APPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVS AAASFSRINLSQPSL FGG CDKKRT LLDCRCEKAV VSGGQRLVQPL+SVSVQDDVMQKVLCNNGSSKL     K L+NKSSFLV
Sbjct:    1 MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQ-EDTEISIFEARRYFSESGSNDRSKSTNLNGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSDHNGRGSSKKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNRIVHHNHQTISSSDPIRLTIPSNNVTRTINYAGNSRESSAPVSNFSFPTLNPIKPEFNRXXXXXXXXXXXXXXXSPKGVTTTTDEEAASDASSDLFEIESFSTQHIARPSAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSAAAASFSRINLSQPSLTFGGGCDKKRTALLDCRCEKAVMVSGGQRLVQPLRSVSVQDDVMQKVLCNNGSSKL-----KMLNNKSSFLV 403

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BLAST of BolC9t60006H-R vs. GenBank_protein
Match: VDD21146.1 (unnamed protein product [Brassica rapa])

HSP 1 Score: 655 bits (1690), Expect = 9.480e-235
Identity = 378/409 (92.42%), Postives = 384/409 (93.89%), Query Frame = 0

Query:    1 MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNN-EQKEQQEDTEISIFEARRYFSESGSNDRSKSANLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSDRDGRGSRKKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNRVVHHNHQTISSSDPIRLTIPSNTVTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXX---SPKGVTTTDEEAASDASSDLFEIESFSTQHISRPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSLVFGG-CDKKRTGLLDCRCEKAVTVSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV 404
            MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNN EQKEQQEDTEISIFEARRYFSESGSNDRSKS NLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSD DGRGS KKGPRWFFRRRTCPCSSSKSVQV+ETKPRIAEFKTGSDRT+S  +VHHNHQ ISSSDPIRLTIPSN VTRTINYAGNSRESS PVSNFSFPTLNPIK   XXXXXXXXXXXXXX   SPKGVTTTDEEAASDASSDLFEIESFSTQHISRPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSL FGG CDKKRT LLDCRCEKAV VSGGQRLVQPLK+VSVQDDVMQKVLCNNGSS     +LK L+NKSSFLV
Sbjct:    1 MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSTNLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSDHDGRGSSKKGPRWFFRRRTCPCSSSKSVQVQETKPRIAEFKTGSDRTVS--IVHHNHQRISSSDPIRLTIPSNNVTRTINYAGNSRESSVPVSNFSFPTLNPIKPDLXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHISRPCAPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSLTFGGGCDKKRTALLDCRCEKAVMVSGGQRLVQPLKNVSVQDDVMQKVLCNNGSS-----TLKMLNNKSSFLV 402

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BLAST of BolC9t60006H-R vs. GenBank_protein
Match: RID42910.1 (hypothetical protein BRARA_J02763 [Brassica rapa])

HSP 1 Score: 638 bits (1646), Expect = 4.410e-228
Identity = 372/409 (90.95%), Postives = 378/409 (92.42%), Query Frame = 0

Query:    1 MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNN-EQKEQQEDTEISIFEARRYFSESGSNDRSKSANLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSDRDGRGSRKKGPRWFFRRRTCPCSSSKSVQVRETKPRIAEFKTGSDRTISNRVVHHNHQTISSSDPIRLTIPSNTVTRTINYAGNSRESSAPVSNFSFPTLNPIKXXXXXXXXXXXXXXXXX---SPKGVTTTDEEAASDASSDLFEIESFSTQHISRPCAPPPP-ADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSVAAASFSRINLSQPSLVFGGCDKKRTGLLDCRCEKAVTVSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKSSFLV 404
            MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNN EQKEQQEDTEISIFEARRYFSESGSNDRSKS NLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSD DGRGS KKGPRWFFRRRTCPCSSSKSVQV+ETKPRIAEFKTGSDRT+S  +VHHNHQ ISSSDPIRLTIPSN VTRTINYAGNSRESS PVSNFSFPTLNPIK   XXXXXXXXXXXXXX   SPKGVTTTDEEAASDASSDLFEIESFSTQHISRPCAPPPP ADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVS  AA+FSRINLSQPSL FG  DKKRT LLDCRCEKAV V  GQRLVQPLK+VSVQDDVMQKVLCNNGSSKL     K L+NKSSFLV
Sbjct:    1 MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNNEQKEQQEDTEISIFEARRYFSESGSNDRSKSTNLSGPRFSSASSAKVSSFTVGHTASSEASWNSQTGLLRNNNRQGSDHDGRGSSKKGPRWFFRRRTCPCSSSKSVQVQETKPRIAEFKTGSDRTVS--IVHHNHQRISSSDPIRLTIPSNNVTRTINYAGNSRESSVPVSNFSFPTLNPIKPDLXXXXXXXXXXXXXXXXXSPKGVTTTDEEAASDASSDLFEIESFSTQHISRPCAPPPPPADLVRNSVDETATEYGYEPSEASVTWSVTTAEPVSAVAANFSRINLSQPSLTFG--DKKRTALLDCRCEKAVMVGSGQRLVQPLKNVSVQDDVMQKVLCNNGSSKL-----KMLNNKSSFLV 400

The following BLAST results are available for this feature:

BLAST of BolC9t60006H-R vs. GenBank_protein

BLAST of BolC9t60006H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR)
Total hits: 20


Match Name	E-value	Identity	Description
VDD34683.1	2.630e-260	100.00	unnamed protein product [Brassica oleracea]	[more]
KAF3568542.1	9.790e-256	98.27	hypothetical protein DY000_02019815 [Brassica cret...	[more]
XP_013609376.1	1.620e-254	97.77	PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 4 ...	[more]
XP_013666145.1	2.300e-254	97.77	protein PHYTOCHROME KINASE SUBSTRATE 4-like [Brass...	[more]
KAF2536138.1	4.640e-254	97.52	hypothetical protein F2Q68_00023392 [Brassica cret...	[more]
KAF3505099.1	4.640e-254	97.77	hypothetical protein F2Q69_00045661 [Brassica cret...	[more]
XP_013666203.1	1.360e-236	92.65	protein PHYTOCHROME KINASE SUBSTRATE 4 [Brassica n...	[more]
XP_009122629.1	3.440e-235	92.18	protein PHYTOCHROME KINASE SUBSTRATE 4 [Brassica r...	[more]
VDD21146.1	9.480e-235	92.42	unnamed protein product [Brassica rapa]	[more]
RID42910.1	4.410e-228	90.95	hypothetical protein BRARA_J02763 [Brassica rapa]	[more]

Pages

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0009638	phototropism
molecular_function	GO:0016301	kinase activity

InterPro

Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..133
IPR039820	Protein PHYTOCHROME KINASE SUBSTRATE 4	PANTHER	PTHR33781:SF1	PROTEIN PHYTOCHROME KINASE SUBSTRATE 4	coord: 1..385
IPR039615	Protein PHYTOCHROME KINASE SUBSTRATE	PANTHER	PTHR33781	PROTEIN PHYTOCHROME KINASE SUBSTRATE 1-RELATED	coord: 1..385

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C9	contig	C9:62031171..62032385 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Interproscan on OGS1.0	2022-03-19
Blast2go on OGS1.0	2022-03-19
Diamond on OGS1.0 vs NR	2022-03-19
Brassica oleracea HDEM OGS1.0	2018-11-02

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
BolC9t60006H-R	BolC9t60006H-R	Brassica oleracea HDEM	mRNA	C9 62031171..62032385 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>BolC9t60006H-R-P ID=BolC9t60006H-R-P|Name=BolC9t60006H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=405bp
MAETTVTVVATKRDALDPYIKIIQSRSLDIDVSFSSYLKPDNNEQKEQQE
DTEISIFEARRYFSESGSNDRSKSANLSGPRFSSASSAKVSSFTVGHTAS
SEASWNSQTGLLRNNNRQGSDRDGRGSRKKGPRWFFRRRTCPCSSSKSVQ
VRETKPRIAEFKTGSDRTISNRVVHHNHQTISSSDPIRLTIPSNTVTRTI
NYAGNSRESSAPVSNFSFPTLNPIKPEIEPVLHPIKPVLNPTSPKGVTTT
DEEAASDASSDLFEIESFSTQHISRPCAPPPPADLVRNSVDETATEYGYE
PSEASVTWSVTTAEPVSVAAASFSRINLSQPSLVFGGCDKKRTGLLDCRC
EKAVTVSGGQRLVQPLKSVSVQDDVMQKVLCNNGSSKLSVTSLKTLDNKS
SFLV.

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR039615	PKS
IPR039820	PSK4

Vocabulary: **Biological Process**
Term	Definition
GO:0016310	phosphorylation
GO:0009638	phototropism

Vocabulary: **Molecular Function**
Term	Definition
GO:0016301	kinase activity

Orthology

View orthology data for BolC9t60006H-R-P