BolC9t59814H-R-P (polypeptide) Brassica oleracea HDEM
Overview
Homology
BLAST of BolC9t59814H-R vs. GenBank_protein
Match: VDD34491.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 244 bits (623), Expect = 2.290e-81 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 Query: 1 MTINKCTCEFKQHHIPHGKESVQENKILSQENKIQRFNEHVQDLRRQLVQCRNENQVELTELVTELDPSTNFVMLPLMAEGLAMRETIRKSKELGIRRLRCESDSSQLIKALNSYLLSLWRFVG 124 MTINKCTCEFKQHHIPHGKESVQENKILSQENKIQRFNEHVQDLRRQLVQCRNENQVELTELVTELDPSTNFVMLPLMAEGLAMRETIRKSKELGIRRLRCESDSSQLIKALNSYLLSLWRFVG Sbjct: 1 MTINKCTCEFKQHHIPHGKESVQENKILSQENKIQRFNEHVQDLRRQLVQCRNENQVELTELVTELDPSTNFVMLPLMAEGLAMRETIRKSKELGIRRLRCESDSSQLIKALNSYLLSLWRFVG 124
BLAST of BolC9t59814H-R vs. GenBank_protein
Match: CAF2322249.1 (unnamed protein product [Brassica napus]) HSP 1 Score: 197 bits (502), Expect = 5.010e-63 Identity = 107/124 (86.29%), Postives = 109/124 (87.90%), Query Frame = 0 Query: 1 MTINKCTCEFKQHHIPHGKESVQENKILSQENKIQRFNEHVQDLRRQLVQCRNENQVELTELVTELDPSTNFVMLPLMAEGLAMRETIRKSKELGIRRLRCESDSSQLIKALNSYLLSLWRFVG 124 MTINKCTCEFKQHHIPHGKESVQE KI SQENKIQRFNE VQDLRRQLVQCRNENQVELTE+VTELD LPL +GLAMRE I KSKELGIRRLRCESDSS LIKALNSYLLSLWRFVG Sbjct: 1 MTINKCTCEFKQHHIPHGKESVQEKKIFSQENKIQRFNEQVQDLRRQLVQCRNENQVELTEVVTELD------QLPL--KGLAMREAIWKSKELGIRRLRCESDSSPLIKALNSYLLSLWRFVG 116
BLAST of BolC9t59814H-R vs. GenBank_protein
Match: VDD20781.1 (unnamed protein product [Brassica rapa]) HSP 1 Score: 184 bits (468), Expect = 9.540e-58 Identity = 106/131 (80.92%), Postives = 108/131 (82.44%), Query Frame = 0 Query: 1 MTINKCTCEFK---QHHIPHGKESVQENKILSQENKIQRFNEHVQDLRRQL----VQCRNENQVELTELVTELDPSTNFVMLPLMAEGLAMRETIRKSKELGIRRLRCESDSSQLIKALNSYLLSLWRFVG 124 M INKCTCEFK QHHIPHGKESVQE KILSQEN QRFNE VQD RRQL VQCRNENQVELTELVTELD LPL +GLAMRE IRKSKELGIRR+RCESDSSQLIKALNSYLLSLWRFVG Sbjct: 1 MRINKCTCEFKSDKQHHIPHGKESVQEKKILSQENNTQRFNEQVQDPRRQLDRYWVQCRNENQVELTELVTELD------QLPL--KGLAMREAIRKSKELGIRRVRCESDSSQLIKALNSYLLSLWRFVG 123
BLAST of BolC9t59814H-R vs. GenBank_protein
Match: CAF2322045.1 (unnamed protein product [Brassica napus]) HSP 1 Score: 179 bits (455), Expect = 2.460e-55 Identity = 97/116 (83.62%), Postives = 99/116 (85.34%), Query Frame = 0 Query: 9 EFKQHHIPHGKESVQENKILSQENKIQRFNEHVQDLRRQLVQCRNENQVELTELVTELDPSTNFVMLPLMAEGLAMRETIRKSKELGIRRLRCESDSSQLIKALNSYLLSLWRFVG 124 + +QHHIPHGKESVQE KILSQENKIQRFNE VQDLRRQLVQCRNENQ STNFVM PLMAEGLAMRE IRKSKELGIRRLRCESDSSQLIKALNSYLLSLWRFVG Sbjct: 47 DTEQHHIPHGKESVQEKKILSQENKIQRFNEQVQDLRRQLVQCRNENQ--------RFSSSTNFVMSPLMAEGLAMREAIRKSKELGIRRLRCESDSSQLIKALNSYLLSLWRFVG 154
BLAST of BolC9t59814H-R vs. GenBank_protein
Match: CAF2322178.1 (unnamed protein product [Brassica napus]) HSP 1 Score: 175 bits (444), Expect = 1.160e-53 Identity = 95/116 (81.90%), Postives = 98/116 (84.48%), Query Frame = 0 Query: 9 EFKQHHIPHGKESVQENKILSQENKIQRFNEHVQDLRRQLVQCRNENQVELTELVTELDPSTNFVMLPLMAEGLAMRETIRKSKELGIRRLRCESDSSQLIKALNSYLLSLWRFVG 124 + +QHHIPHGKESVQE KILSQENKIQRFN VQ+LRRQLVQCRNENQ STNFVM PLMAEGLAMRE IRKSKELGIRRLRCESDSSQLIKALNSYLLSLWRFVG Sbjct: 47 DTEQHHIPHGKESVQEKKILSQENKIQRFNAQVQNLRRQLVQCRNENQ--------RFSSSTNFVMSPLMAEGLAMREAIRKSKELGIRRLRCESDSSQLIKALNSYLLSLWRFVG 154
BLAST of BolC9t59814H-R vs. GenBank_protein
Match: CAF1789726.1 (unnamed protein product, partial [Brassica napus]) HSP 1 Score: 160 bits (405), Expect = 7.510e-48 Identity = 88/114 (77.19%), Postives = 92/114 (80.70%), Query Frame = 0 Query: 11 KQHHIPHGKESVQENKILSQENKIQRFNEHVQDLRRQLVQCRNENQVELTELVTELDPSTNFVMLPLMAEGLAMRETIRKSKELGIRRLRCESDSSQLIKALNSYLLSLWRFVG 124 KQHHIPHGKESVQE KILSQEN QRFNE VQD RRQLVQ + + + STNFVM PLMAEGLAMRE IRKSKELGIRR+RCESDSSQLIKALNSYLLSLWRFVG Sbjct: 42 KQHHIPHGKESVQEKKILSQENNTQRFNEQVQDPRRQLVQSK----------LRDFSSSTNFVMSPLMAEGLAMREAIRKSKELGIRRVRCESDSSQLIKALNSYLLSLWRFVG 145
BLAST of BolC9t59814H-R vs. GenBank_protein
Match: CAF2358385.1 (unnamed protein product, partial [Brassica napus]) HSP 1 Score: 159 bits (403), Expect = 8.890e-48 Identity = 89/114 (78.07%), Postives = 90/114 (78.95%), Query Frame = 0 Query: 11 KQHHIPHGKESVQENKILSQENKIQRFNEHVQDLRRQLVQCRNENQVELTELVTELDPSTNFVMLPLMAEGLAMRETIRKSKELGIRRLRCESDSSQLIKALNSYLLSLWRFVG 124 KQHHIPHGKESVQE KILSQEN QRFNE VQD RRQLVQ R STNFVM PLMAEGLAMRE IRKSKELGIRR+RCESDSSQLIKALNSYLLSLWRFVG Sbjct: 28 KQHHIPHGKESVQEKKILSQENNTQRFNEQVQDPRRQLVQSR-------------FSSSTNFVMSPLMAEGLAMREAIRKSKELGIRRVRCESDSSQLIKALNSYLLSLWRFVG 128
BLAST of BolC9t59814H-R vs. GenBank_protein
Match: VDD34490.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 148 bits (374), Expect = 5.790e-43 Identity = 84/103 (81.55%), Postives = 88/103 (85.44%), Query Frame = 0 Query: 12 QHHIPHGKESVQENKILSQENKIQRFNEHVQDLRRQLVQCRNENQVELTELVTELDPSTNFVMLPLMAEGLAMRETIRKSKELGIRRLRCESDSSQLIKALNS 114 QHHIPHGKESVQE KILSQENKIQR N+ VQDLRRQLVQCRNEN VEL ELVTELD LPL GLAMRE+I+KSKELGIR+LRCESDSSQLIKALNS Sbjct: 48 QHHIPHGKESVQEKKILSQENKIQRLNDQVQDLRRQLVQCRNENHVELMELVTELD------QLPL--SGLAMRESIKKSKELGIRQLRCESDSSQLIKALNS 142
BLAST of BolC9t59814H-R vs. GenBank_protein
Match: VDD34493.1 (unnamed protein product [Brassica oleracea]) HSP 1 Score: 147 bits (370), Expect = 2.340e-42 Identity = 83/103 (80.58%), Postives = 88/103 (85.44%), Query Frame = 0 Query: 12 QHHIPHGKESVQENKILSQENKIQRFNEHVQDLRRQLVQCRNENQVELTELVTELDPSTNFVMLPLMAEGLAMRETIRKSKELGIRRLRCESDSSQLIKALNS 114 QHHIPHGKESV+E KILSQENKIQR N+ VQDLRRQLVQCRNEN VEL ELVTELD LPL GLAMRE+I+KSKELGIR+LRCESDSSQLIKALNS Sbjct: 48 QHHIPHGKESVKEKKILSQENKIQRLNDQVQDLRRQLVQCRNENHVELMELVTELD------QLPL--SGLAMRESIKKSKELGIRQLRCESDSSQLIKALNS 142
BLAST of BolC9t59814H-R vs. GenBank_protein
Match: KAF2536234.1 (hypothetical protein F2Q68_00023219 [Brassica cretica]) HSP 1 Score: 145 bits (366), Expect = 5.210e-41 Identity = 84/114 (73.68%), Postives = 88/114 (77.19%), Query Frame = 0 Query: 12 QHHIPHGKESVQENKILSQENKIQRFNEHVQDLRRQLVQCRNENQVE--LTEL---------VTELDPSTNFVMLPLMAEGLAMRETIRKSKELGIRRLRCESDSSQLIKALNS 114 QHHIPHGKESVQE KILSQENKIQR N+ VQDLRRQLVQCRNEN VE L L ST+FVM PLMAEG AMRE I+KSKELGIR+LRCESDSSQLIKALNS Sbjct: 87 QHHIPHGKESVQEKKILSQENKIQRLNDQVQDLRRQLVQCRNENLVEGLLAGLGWTIKNSRETQRFSSSTDFVMSPLMAEGFAMREAIKKSKELGIRQLRCESDSSQLIKALNS 200 The following BLAST results are available for this feature:
BLAST of BolC9t59814H-R vs. GenBank_protein
Analysis Date: 2022-03-19 (Diamond on OGS1.0 vs NR) Total hits: 20
Pagesback to topInterPro
Analysis Name: Interproscan on OGS1.0
Date Performed: 2022-03-19
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >BolC9t59814H-R-P ID=BolC9t59814H-R-P|Name=BolC9t59814H-R|organism=Brassica oleracea HDEM|type=polypeptide|length=125bpback to top Orthology
View orthology data for BolC9t59814H-R-P
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